data_6N6A # _model_server_result.job_id HBbpZ7FV1IIt_Us3p3-kVg _model_server_result.datetime_utc '2024-12-23 12:52:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n6a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 6N6A # _exptl.entry_id 6N6A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6N6A _cell.length_a 89.864 _cell.length_b 89.864 _cell.length_c 59.622 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N6A _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 12 A ASP 12 1_555 C NA NA . D NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc2 D O HOH . A HOH 238 1_555 C NA NA . D NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc3 D O HOH . A HOH 269 1_555 C NA NA . D NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc4 B O3' G 1 D G 603 1_555 C NA NA . D NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? metalc ? metalc5 B OP1 G 2 D G 604 1_555 C NA NA . D NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc6 C NA NA . D NA 701 1_555 E O HOH . D HOH 816 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6N6A _atom_sites.fract_transf_matrix[1][1] 0.011128 _atom_sites.fract_transf_matrix[1][2] 0.006425 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012849 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016772 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NA D 1 701 182 NA NA . D 4 HOH A 1 201 262 HOH HOH . D 4 HOH A 2 202 255 HOH HOH . D 4 HOH A 3 203 370 HOH HOH . D 4 HOH A 4 204 242 HOH HOH . D 4 HOH A 5 205 334 HOH HOH . D 4 HOH A 6 206 453 HOH HOH . D 4 HOH A 7 207 363 HOH HOH . D 4 HOH A 8 208 331 HOH HOH . D 4 HOH A 9 209 380 HOH HOH . D 4 HOH A 10 210 269 HOH HOH . D 4 HOH A 11 211 315 HOH HOH . D 4 HOH A 12 212 442 HOH HOH . D 4 HOH A 13 213 299 HOH HOH . D 4 HOH A 14 214 264 HOH HOH . D 4 HOH A 15 215 289 HOH HOH . D 4 HOH A 16 216 295 HOH HOH . D 4 HOH A 17 217 408 HOH HOH . D 4 HOH A 18 218 337 HOH HOH . D 4 HOH A 19 219 190 HOH HOH . D 4 HOH A 20 220 265 HOH HOH . D 4 HOH A 21 221 203 HOH HOH . D 4 HOH A 22 222 344 HOH HOH . D 4 HOH A 23 223 389 HOH HOH . D 4 HOH A 24 224 220 HOH HOH . D 4 HOH A 25 225 351 HOH HOH . D 4 HOH A 26 226 304 HOH HOH . D 4 HOH A 27 227 348 HOH HOH . D 4 HOH A 28 228 199 HOH HOH . D 4 HOH A 29 229 283 HOH HOH . D 4 HOH A 30 230 395 HOH HOH . D 4 HOH A 31 231 427 HOH HOH . D 4 HOH A 32 232 433 HOH HOH . D 4 HOH A 33 233 287 HOH HOH . D 4 HOH A 34 234 187 HOH HOH . D 4 HOH A 35 235 368 HOH HOH . D 4 HOH A 36 236 336 HOH HOH . D 4 HOH A 37 237 279 HOH HOH . D 4 HOH A 38 238 196 HOH HOH . D 4 HOH A 39 239 302 HOH HOH . D 4 HOH A 40 240 237 HOH HOH . D 4 HOH A 41 241 320 HOH HOH . D 4 HOH A 42 242 189 HOH HOH . D 4 HOH A 43 243 367 HOH HOH . D 4 HOH A 44 244 193 HOH HOH . D 4 HOH A 45 245 339 HOH HOH . D 4 HOH A 46 246 385 HOH HOH . D 4 HOH A 47 247 326 HOH HOH . D 4 HOH A 48 248 246 HOH HOH . D 4 HOH A 49 249 297 HOH HOH . D 4 HOH A 50 250 233 HOH HOH . D 4 HOH A 51 251 311 HOH HOH . D 4 HOH A 52 252 249 HOH HOH . D 4 HOH A 53 253 275 HOH HOH . D 4 HOH A 54 254 268 HOH HOH . D 4 HOH A 55 255 309 HOH HOH . D 4 HOH A 56 256 415 HOH HOH . D 4 HOH A 57 257 294 HOH HOH . D 4 HOH A 58 258 240 HOH HOH . D 4 HOH A 59 259 229 HOH HOH . D 4 HOH A 60 260 405 HOH HOH . D 4 HOH A 61 261 212 HOH HOH . D 4 HOH A 62 262 352 HOH HOH . D 4 HOH A 63 263 201 HOH HOH . D 4 HOH A 64 264 349 HOH HOH . D 4 HOH A 65 265 272 HOH HOH . D 4 HOH A 66 266 232 HOH HOH . D 4 HOH A 67 267 228 HOH HOH . D 4 HOH A 68 268 325 HOH HOH . D 4 HOH A 69 269 183 HOH HOH . D 4 HOH A 70 270 298 HOH HOH . D 4 HOH A 71 271 359 HOH HOH . D 4 HOH A 72 272 392 HOH HOH . D 4 HOH A 73 273 366 HOH HOH . D 4 HOH A 74 274 217 HOH HOH . D 4 HOH A 75 275 411 HOH HOH . D 4 HOH A 76 276 188 HOH HOH . D 4 HOH A 77 277 274 HOH HOH . D 4 HOH A 78 278 236 HOH HOH . D 4 HOH A 79 279 222 HOH HOH . D 4 HOH A 80 280 301 HOH HOH . D 4 HOH A 81 281 322 HOH HOH . D 4 HOH A 82 282 207 HOH HOH . D 4 HOH A 83 283 238 HOH HOH . D 4 HOH A 84 284 211 HOH HOH . D 4 HOH A 85 285 270 HOH HOH . D 4 HOH A 86 286 184 HOH HOH . D 4 HOH A 87 287 241 HOH HOH . D 4 HOH A 88 288 278 HOH HOH . D 4 HOH A 89 289 273 HOH HOH . D 4 HOH A 90 290 332 HOH HOH . D 4 HOH A 91 291 260 HOH HOH . D 4 HOH A 92 292 263 HOH HOH . D 4 HOH A 93 293 305 HOH HOH . D 4 HOH A 94 294 235 HOH HOH . D 4 HOH A 95 295 185 HOH HOH . D 4 HOH A 96 296 306 HOH HOH . D 4 HOH A 97 297 230 HOH HOH . D 4 HOH A 98 298 461 HOH HOH . D 4 HOH A 99 299 397 HOH HOH . D 4 HOH A 100 300 252 HOH HOH . D 4 HOH A 101 301 407 HOH HOH . D 4 HOH A 102 302 387 HOH HOH . D 4 HOH A 103 303 243 HOH HOH . D 4 HOH A 104 304 417 HOH HOH . D 4 HOH A 105 305 192 HOH HOH . D 4 HOH A 106 306 280 HOH HOH . D 4 HOH A 107 307 208 HOH HOH . D 4 HOH A 108 308 198 HOH HOH . D 4 HOH A 109 309 247 HOH HOH . D 4 HOH A 110 310 271 HOH HOH . D 4 HOH A 111 311 231 HOH HOH . D 4 HOH A 112 312 206 HOH HOH . D 4 HOH A 113 313 210 HOH HOH . D 4 HOH A 114 314 454 HOH HOH . D 4 HOH A 115 315 226 HOH HOH . D 4 HOH A 116 316 195 HOH HOH . D 4 HOH A 117 317 317 HOH HOH . D 4 HOH A 118 318 191 HOH HOH . D 4 HOH A 119 319 310 HOH HOH . D 4 HOH A 120 320 239 HOH HOH . D 4 HOH A 121 321 436 HOH HOH . D 4 HOH A 122 322 204 HOH HOH . D 4 HOH A 123 323 327 HOH HOH . D 4 HOH A 124 324 234 HOH HOH . D 4 HOH A 125 325 225 HOH HOH . D 4 HOH A 126 326 205 HOH HOH . D 4 HOH A 127 327 443 HOH HOH . D 4 HOH A 128 328 285 HOH HOH . D 4 HOH A 129 329 388 HOH HOH . D 4 HOH A 130 330 202 HOH HOH . D 4 HOH A 131 331 288 HOH HOH . D 4 HOH A 132 332 401 HOH HOH . D 4 HOH A 133 333 346 HOH HOH . D 4 HOH A 134 334 391 HOH HOH . D 4 HOH A 135 335 375 HOH HOH . D 4 HOH A 136 336 300 HOH HOH . D 4 HOH A 137 337 384 HOH HOH . D 4 HOH A 138 338 186 HOH HOH . D 4 HOH A 139 339 257 HOH HOH . D 4 HOH A 140 340 307 HOH HOH . D 4 HOH A 141 341 266 HOH HOH . D 4 HOH A 142 342 377 HOH HOH . D 4 HOH A 143 343 213 HOH HOH . D 4 HOH A 144 344 215 HOH HOH . D 4 HOH A 145 345 324 HOH HOH . D 4 HOH A 146 346 358 HOH HOH . D 4 HOH A 147 347 333 HOH HOH . D 4 HOH A 148 348 216 HOH HOH . D 4 HOH A 149 349 256 HOH HOH . D 4 HOH A 150 350 605 HOH HOH . D 4 HOH A 151 351 354 HOH HOH . D 4 HOH A 152 352 362 HOH HOH . D 4 HOH A 153 353 200 HOH HOH . D 4 HOH A 154 354 312 HOH HOH . D 4 HOH A 155 355 197 HOH HOH . D 4 HOH A 156 356 218 HOH HOH . D 4 HOH A 157 357 253 HOH HOH . D 4 HOH A 158 358 343 HOH HOH . D 4 HOH A 159 359 381 HOH HOH . D 4 HOH A 160 360 194 HOH HOH . D 4 HOH A 161 361 383 HOH HOH . D 4 HOH A 162 362 341 HOH HOH . D 4 HOH A 163 363 277 HOH HOH . D 4 HOH A 164 364 244 HOH HOH . D 4 HOH A 165 365 227 HOH HOH . D 4 HOH A 166 366 267 HOH HOH . D 4 HOH A 167 367 282 HOH HOH . D 4 HOH A 168 368 350 HOH HOH . D 4 HOH A 169 369 396 HOH HOH . D 4 HOH A 170 370 431 HOH HOH . D 4 HOH A 171 371 293 HOH HOH . D 4 HOH A 172 372 361 HOH HOH . D 4 HOH A 173 373 458 HOH HOH . D 4 HOH A 174 374 463 HOH HOH . D 4 HOH A 175 375 209 HOH HOH . D 4 HOH A 176 376 245 HOH HOH . D 4 HOH A 177 377 224 HOH HOH . D 4 HOH A 178 378 251 HOH HOH . D 4 HOH A 179 379 214 HOH HOH . D 4 HOH A 180 380 303 HOH HOH . D 4 HOH A 181 381 394 HOH HOH . D 4 HOH A 182 382 2 HOH HOH . D 4 HOH A 183 383 378 HOH HOH . D 4 HOH A 184 384 338 HOH HOH . D 4 HOH A 185 385 335 HOH HOH . D 4 HOH A 186 386 434 HOH HOH . D 4 HOH A 187 387 446 HOH HOH . D 4 HOH A 188 388 1 HOH HOH . D 4 HOH A 189 389 355 HOH HOH . D 4 HOH A 190 390 409 HOH HOH . D 4 HOH A 191 391 449 HOH HOH . D 4 HOH A 192 392 221 HOH HOH . D 4 HOH A 193 393 447 HOH HOH . D 4 HOH A 194 394 390 HOH HOH . D 4 HOH A 195 395 418 HOH HOH . D 4 HOH A 196 396 435 HOH HOH . D 4 HOH A 197 397 290 HOH HOH . D 4 HOH A 198 398 364 HOH HOH . D 4 HOH A 199 399 386 HOH HOH . D 4 HOH A 200 400 455 HOH HOH . D 4 HOH A 201 401 357 HOH HOH . D 4 HOH A 202 402 313 HOH HOH . D 4 HOH A 203 403 459 HOH HOH . D 4 HOH A 204 404 3 HOH HOH . D 4 HOH A 205 405 420 HOH HOH . D 4 HOH A 206 406 399 HOH HOH . D 4 HOH A 207 407 428 HOH HOH . D 4 HOH A 208 408 413 HOH HOH . D 4 HOH A 209 409 422 HOH HOH . D 4 HOH A 210 410 316 HOH HOH . D 4 HOH A 211 411 308 HOH HOH . D 4 HOH A 212 412 437 HOH HOH . D 4 HOH A 213 413 318 HOH HOH . D 4 HOH A 214 414 330 HOH HOH . D 4 HOH A 215 415 356 HOH HOH . D 4 HOH A 216 416 457 HOH HOH . D 4 HOH A 217 417 432 HOH HOH . D 4 HOH A 218 418 284 HOH HOH . D 4 HOH A 219 419 416 HOH HOH . D 4 HOH A 220 420 258 HOH HOH . D 4 HOH A 221 421 424 HOH HOH . D 4 HOH A 222 422 403 HOH HOH . D 4 HOH A 223 423 414 HOH HOH . D 4 HOH A 224 424 425 HOH HOH . D 4 HOH A 225 425 347 HOH HOH . D 4 HOH A 226 426 456 HOH HOH . D 4 HOH A 227 427 365 HOH HOH . D 4 HOH A 228 428 321 HOH HOH . D 4 HOH A 229 429 379 HOH HOH . D 4 HOH A 230 430 250 HOH HOH . D 4 HOH A 231 431 430 HOH HOH . D 4 HOH A 232 432 372 HOH HOH . D 4 HOH A 233 433 451 HOH HOH . D 4 HOH A 234 434 438 HOH HOH . D 4 HOH A 235 435 371 HOH HOH . D 4 HOH A 236 436 376 HOH HOH . D 4 HOH A 237 437 429 HOH HOH . D 4 HOH A 238 438 292 HOH HOH . D 4 HOH A 239 439 328 HOH HOH . D 4 HOH A 240 440 314 HOH HOH . D 4 HOH A 241 441 419 HOH HOH . D 4 HOH A 242 442 259 HOH HOH . D 4 HOH A 243 443 441 HOH HOH . D 4 HOH A 244 444 382 HOH HOH . D 4 HOH A 245 445 445 HOH HOH . D 4 HOH A 246 446 286 HOH HOH . D 4 HOH A 247 447 281 HOH HOH . D 4 HOH A 248 448 464 HOH HOH . D 4 HOH A 249 449 440 HOH HOH . D 4 HOH A 250 450 248 HOH HOH . D 4 HOH A 251 451 404 HOH HOH . D 4 HOH A 252 452 412 HOH HOH . D 4 HOH A 253 453 462 HOH HOH . D 4 HOH A 254 454 398 HOH HOH . D 4 HOH A 255 455 400 HOH HOH . D 4 HOH A 256 456 342 HOH HOH . D 4 HOH A 257 457 423 HOH HOH . D 4 HOH A 258 458 323 HOH HOH . D 4 HOH A 259 459 276 HOH HOH . D 4 HOH A 260 460 345 HOH HOH . D 4 HOH A 261 461 439 HOH HOH . D 4 HOH A 262 462 223 HOH HOH . D 4 HOH A 263 463 319 HOH HOH . D 4 HOH A 264 464 421 HOH HOH . D 4 HOH A 265 465 406 HOH HOH . D 4 HOH A 266 466 296 HOH HOH . D 4 HOH A 267 467 452 HOH HOH . D 4 HOH A 268 468 374 HOH HOH . D 4 HOH A 269 469 291 HOH HOH . D 4 HOH A 270 470 219 HOH HOH . D 4 HOH A 271 471 340 HOH HOH . D 4 HOH A 272 472 410 HOH HOH . D 4 HOH A 273 473 329 HOH HOH . D 4 HOH A 274 474 254 HOH HOH . D 4 HOH A 275 475 360 HOH HOH . D 4 HOH A 276 476 460 HOH HOH . D 4 HOH A 277 477 402 HOH HOH . D 4 HOH A 278 478 426 HOH HOH . D 4 HOH A 279 479 444 HOH HOH . D 4 HOH A 280 480 448 HOH HOH . D 4 HOH A 281 481 450 HOH HOH . D 4 HOH A 282 482 369 HOH HOH . D 4 HOH A 283 483 393 HOH HOH . E 4 HOH D 1 801 6 HOH HOH . E 4 HOH D 2 802 607 HOH HOH . E 4 HOH D 3 803 606 HOH HOH . E 4 HOH D 4 804 609 HOH HOH . E 4 HOH D 5 805 610 HOH HOH . E 4 HOH D 6 806 619 HOH HOH . E 4 HOH D 7 807 608 HOH HOH . E 4 HOH D 8 808 612 HOH HOH . E 4 HOH D 9 809 616 HOH HOH . E 4 HOH D 10 810 614 HOH HOH . E 4 HOH D 11 811 617 HOH HOH . E 4 HOH D 12 812 618 HOH HOH . E 4 HOH D 13 813 615 HOH HOH . E 4 HOH D 14 814 5 HOH HOH . E 4 HOH D 15 815 620 HOH HOH . E 4 HOH D 16 816 611 HOH HOH . E 4 HOH D 17 817 4 HOH HOH . E 4 HOH D 18 818 353 HOH HOH . E 4 HOH D 19 819 621 HOH HOH . E 4 HOH D 20 820 261 HOH HOH . E 4 HOH D 21 821 373 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -41.963 _atom_site.Cartn_y 11.661 _atom_site.Cartn_z 7.119 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 14.6 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 701 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 212 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #