data_6N6G # _model_server_result.job_id cQh6n6zvLrcC0Wp50GvEfw _model_server_result.datetime_utc '2024-12-23 16:44:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n6g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 6N6G # _exptl.entry_id 6N6G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6N6G _cell.length_a 88.976 _cell.length_b 88.976 _cell.length_c 59.906 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N6G _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 12 A ASP 12 1_555 C NA NA . D NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc2 D O HOH . A HOH 208 1_555 C NA NA . D NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc3 D O HOH . A HOH 213 1_555 C NA NA . D NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc4 D O HOH . A HOH 226 1_555 C NA NA . D NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc5 B O3' C 1 D C 603 1_555 C NA NA . D NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? metalc ? metalc6 B OP1 G 2 D G 604 1_555 C NA NA . D NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6N6G _atom_sites.fract_transf_matrix[1][1] 0.011239 _atom_sites.fract_transf_matrix[1][2] 0.006489 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012978 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016693 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NA D 1 701 1 NA NA . D 4 HOH A 1 201 5 HOH HOH . D 4 HOH A 2 202 12 HOH HOH . D 4 HOH A 3 203 137 HOH HOH . D 4 HOH A 4 204 96 HOH HOH . D 4 HOH A 5 205 160 HOH HOH . D 4 HOH A 6 206 130 HOH HOH . D 4 HOH A 7 207 66 HOH HOH . D 4 HOH A 8 208 2 HOH HOH . D 4 HOH A 9 209 157 HOH HOH . D 4 HOH A 10 210 18 HOH HOH . D 4 HOH A 11 211 85 HOH HOH . D 4 HOH A 12 212 55 HOH HOH . D 4 HOH A 13 213 3 HOH HOH . D 4 HOH A 14 214 71 HOH HOH . D 4 HOH A 15 215 19 HOH HOH . D 4 HOH A 16 216 46 HOH HOH . D 4 HOH A 17 217 54 HOH HOH . D 4 HOH A 18 218 80 HOH HOH . D 4 HOH A 19 219 129 HOH HOH . D 4 HOH A 20 220 73 HOH HOH . D 4 HOH A 21 221 21 HOH HOH . D 4 HOH A 22 222 27 HOH HOH . D 4 HOH A 23 223 153 HOH HOH . D 4 HOH A 24 224 56 HOH HOH . D 4 HOH A 25 225 107 HOH HOH . D 4 HOH A 26 226 1 HOH HOH . D 4 HOH A 27 227 144 HOH HOH . D 4 HOH A 28 228 156 HOH HOH . D 4 HOH A 29 229 162 HOH HOH . D 4 HOH A 30 230 43 HOH HOH . D 4 HOH A 31 231 24 HOH HOH . D 4 HOH A 32 232 47 HOH HOH . D 4 HOH A 33 233 49 HOH HOH . D 4 HOH A 34 234 124 HOH HOH . D 4 HOH A 35 235 146 HOH HOH . D 4 HOH A 36 236 82 HOH HOH . D 4 HOH A 37 237 13 HOH HOH . D 4 HOH A 38 238 14 HOH HOH . D 4 HOH A 39 239 136 HOH HOH . D 4 HOH A 40 240 32 HOH HOH . D 4 HOH A 41 241 40 HOH HOH . D 4 HOH A 42 242 15 HOH HOH . D 4 HOH A 43 243 50 HOH HOH . D 4 HOH A 44 244 132 HOH HOH . D 4 HOH A 45 245 89 HOH HOH . D 4 HOH A 46 246 17 HOH HOH . D 4 HOH A 47 247 62 HOH HOH . D 4 HOH A 48 248 39 HOH HOH . D 4 HOH A 49 249 28 HOH HOH . D 4 HOH A 50 250 128 HOH HOH . D 4 HOH A 51 251 76 HOH HOH . D 4 HOH A 52 252 26 HOH HOH . D 4 HOH A 53 253 65 HOH HOH . D 4 HOH A 54 254 152 HOH HOH . D 4 HOH A 55 255 7 HOH HOH . D 4 HOH A 56 256 100 HOH HOH . D 4 HOH A 57 257 68 HOH HOH . D 4 HOH A 58 258 69 HOH HOH . D 4 HOH A 59 259 37 HOH HOH . D 4 HOH A 60 260 22 HOH HOH . D 4 HOH A 61 261 67 HOH HOH . D 4 HOH A 62 262 75 HOH HOH . D 4 HOH A 63 263 20 HOH HOH . D 4 HOH A 64 264 97 HOH HOH . D 4 HOH A 65 265 38 HOH HOH . D 4 HOH A 66 266 10 HOH HOH . D 4 HOH A 67 267 41 HOH HOH . D 4 HOH A 68 268 78 HOH HOH . D 4 HOH A 69 269 42 HOH HOH . D 4 HOH A 70 270 60 HOH HOH . D 4 HOH A 71 271 58 HOH HOH . D 4 HOH A 72 272 35 HOH HOH . D 4 HOH A 73 273 108 HOH HOH . D 4 HOH A 74 274 61 HOH HOH . D 4 HOH A 75 275 57 HOH HOH . D 4 HOH A 76 276 29 HOH HOH . D 4 HOH A 77 277 63 HOH HOH . D 4 HOH A 78 278 4 HOH HOH . D 4 HOH A 79 279 33 HOH HOH . D 4 HOH A 80 280 110 HOH HOH . D 4 HOH A 81 281 31 HOH HOH . D 4 HOH A 82 282 93 HOH HOH . D 4 HOH A 83 283 16 HOH HOH . D 4 HOH A 84 284 25 HOH HOH . D 4 HOH A 85 285 113 HOH HOH . D 4 HOH A 86 286 48 HOH HOH . D 4 HOH A 87 287 135 HOH HOH . D 4 HOH A 88 288 151 HOH HOH . D 4 HOH A 89 289 145 HOH HOH . D 4 HOH A 90 290 72 HOH HOH . D 4 HOH A 91 291 45 HOH HOH . D 4 HOH A 92 292 102 HOH HOH . D 4 HOH A 93 293 159 HOH HOH . D 4 HOH A 94 294 148 HOH HOH . D 4 HOH A 95 295 34 HOH HOH . D 4 HOH A 96 296 44 HOH HOH . D 4 HOH A 97 297 116 HOH HOH . D 4 HOH A 98 298 59 HOH HOH . D 4 HOH A 99 299 161 HOH HOH . D 4 HOH A 100 300 11 HOH HOH . D 4 HOH A 101 301 23 HOH HOH . D 4 HOH A 102 302 88 HOH HOH . D 4 HOH A 103 303 122 HOH HOH . D 4 HOH A 104 304 92 HOH HOH . D 4 HOH A 105 305 87 HOH HOH . D 4 HOH A 106 306 30 HOH HOH . D 4 HOH A 107 307 83 HOH HOH . D 4 HOH A 108 308 112 HOH HOH . D 4 HOH A 109 309 36 HOH HOH . D 4 HOH A 110 310 95 HOH HOH . D 4 HOH A 111 311 98 HOH HOH . D 4 HOH A 112 312 131 HOH HOH . D 4 HOH A 113 313 64 HOH HOH . D 4 HOH A 114 314 140 HOH HOH . D 4 HOH A 115 315 81 HOH HOH . D 4 HOH A 116 316 119 HOH HOH . D 4 HOH A 117 317 149 HOH HOH . D 4 HOH A 118 318 158 HOH HOH . D 4 HOH A 119 319 90 HOH HOH . D 4 HOH A 120 320 134 HOH HOH . D 4 HOH A 121 321 123 HOH HOH . D 4 HOH A 122 322 91 HOH HOH . D 4 HOH A 123 323 142 HOH HOH . D 4 HOH A 124 324 150 HOH HOH . D 4 HOH A 125 325 117 HOH HOH . D 4 HOH A 126 326 105 HOH HOH . D 4 HOH A 127 327 111 HOH HOH . D 4 HOH A 128 328 154 HOH HOH . D 4 HOH A 129 329 103 HOH HOH . D 4 HOH A 130 330 74 HOH HOH . D 4 HOH A 131 331 101 HOH HOH . D 4 HOH A 132 332 106 HOH HOH . D 4 HOH A 133 333 120 HOH HOH . D 4 HOH A 134 334 84 HOH HOH . D 4 HOH A 135 335 125 HOH HOH . D 4 HOH A 136 336 133 HOH HOH . D 4 HOH A 137 337 143 HOH HOH . D 4 HOH A 138 338 70 HOH HOH . D 4 HOH A 139 339 104 HOH HOH . D 4 HOH A 140 340 118 HOH HOH . D 4 HOH A 141 341 138 HOH HOH . D 4 HOH A 142 342 79 HOH HOH . D 4 HOH A 143 343 53 HOH HOH . D 4 HOH A 144 344 77 HOH HOH . D 4 HOH A 145 345 115 HOH HOH . D 4 HOH A 146 346 139 HOH HOH . D 4 HOH A 147 347 126 HOH HOH . D 4 HOH A 148 348 51 HOH HOH . D 4 HOH A 149 349 86 HOH HOH . D 4 HOH A 150 350 52 HOH HOH . D 4 HOH A 151 351 99 HOH HOH . E 4 HOH D 1 801 141 HOH HOH . E 4 HOH D 2 802 127 HOH HOH . E 4 HOH D 3 803 109 HOH HOH . E 4 HOH D 4 804 8 HOH HOH . E 4 HOH D 5 805 155 HOH HOH . E 4 HOH D 6 806 6 HOH HOH . E 4 HOH D 7 807 9 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -41.772 _atom_site.Cartn_y 11.613 _atom_site.Cartn_z 6.881 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 48.74 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 701 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 79 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #