data_6N6U # _model_server_result.job_id QJtl5d1ItxvkPxsbqT-yWg _model_server_result.datetime_utc '2024-11-06 21:37:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n6u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6N6U # _exptl.entry_id 6N6U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 301.362 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Imipenem _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6N6U _cell.length_a 136.161 _cell.length_b 44.2 _cell.length_c 46.627 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N6U _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 49 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 79 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C7 _struct_conn.ptnr2_label_comp_id ID1 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id ID1 _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.417 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C12 H19 N3 O4 S' _chem_comp.formula_weight 301.362 _chem_comp.id ID1 _chem_comp.mon_nstd_flag . _chem_comp.name Imipenem _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O31 C31 ID1 doub 139 n n C31 O32 ID1 sing 140 n n C31 C3 ID1 sing 141 n n C7 C6 ID1 sing 142 n n C7 O7 ID1 doub 143 n n C3 N4 ID1 doub 144 n n C3 C2 ID1 sing 145 n n N4 C5 ID1 sing 146 n n S21 C2 ID1 sing 147 n n S21 C22 ID1 sing 148 n n C6 C5 ID1 sing 149 n n C6 C61 ID1 sing 150 n n C62 C61 ID1 sing 151 n n C2 C1 ID1 sing 152 n n C5 C1 ID1 sing 153 n n C61 O62 ID1 sing 154 n n C22 C23 ID1 sing 155 n n N24 C23 ID1 sing 156 n n N24 C25 ID1 doub 157 n n C25 N26 ID1 sing 158 n n C7 H1 ID1 sing 159 n n C2 H2 ID1 sing 160 n n C6 H3 ID1 sing 161 n n C5 H4 ID1 sing 162 n n C61 H6 ID1 sing 163 n n O62 H7 ID1 sing 164 n n C62 H8 ID1 sing 165 n n C62 H9 ID1 sing 166 n n C62 H10 ID1 sing 167 n n O32 H13 ID1 sing 168 n n C22 H14 ID1 sing 169 n n C22 H15 ID1 sing 170 n n C23 H16 ID1 sing 171 n n C23 H17 ID1 sing 172 n n C25 H18 ID1 sing 173 n n N26 H19 ID1 sing 174 n n N26 H20 ID1 sing 175 n n C1 H21 ID1 sing 176 n n C1 H22 ID1 sing 177 n n # _atom_sites.entry_id 6N6U _atom_sites.fract_transf_matrix[1][1] 0.007344 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022624 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021447 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ID1 A 1 301 301 ID1 ID1 . C 3 HOH A 1 401 198 HOH HOH . C 3 HOH A 2 402 135 HOH HOH . C 3 HOH A 3 403 30 HOH HOH . C 3 HOH A 4 404 213 HOH HOH . C 3 HOH A 5 405 83 HOH HOH . C 3 HOH A 6 406 196 HOH HOH . C 3 HOH A 7 407 208 HOH HOH . C 3 HOH A 8 408 240 HOH HOH . C 3 HOH A 9 409 53 HOH HOH . C 3 HOH A 10 410 187 HOH HOH . C 3 HOH A 11 411 7 HOH HOH . C 3 HOH A 12 412 94 HOH HOH . C 3 HOH A 13 413 128 HOH HOH . C 3 HOH A 14 414 226 HOH HOH . C 3 HOH A 15 415 21 HOH HOH . C 3 HOH A 16 416 42 HOH HOH . C 3 HOH A 17 417 221 HOH HOH . C 3 HOH A 18 418 41 HOH HOH . C 3 HOH A 19 419 80 HOH HOH . C 3 HOH A 20 420 191 HOH HOH . C 3 HOH A 21 421 62 HOH HOH . C 3 HOH A 22 422 134 HOH HOH . C 3 HOH A 23 423 8 HOH HOH . C 3 HOH A 24 424 55 HOH HOH . C 3 HOH A 25 425 68 HOH HOH . C 3 HOH A 26 426 238 HOH HOH . C 3 HOH A 27 427 172 HOH HOH . C 3 HOH A 28 428 149 HOH HOH . C 3 HOH A 29 429 102 HOH HOH . C 3 HOH A 30 430 59 HOH HOH . C 3 HOH A 31 431 46 HOH HOH . C 3 HOH A 32 432 121 HOH HOH . C 3 HOH A 33 433 22 HOH HOH . C 3 HOH A 34 434 101 HOH HOH . C 3 HOH A 35 435 211 HOH HOH . C 3 HOH A 36 436 227 HOH HOH . C 3 HOH A 37 437 118 HOH HOH . C 3 HOH A 38 438 57 HOH HOH . C 3 HOH A 39 439 215 HOH HOH . C 3 HOH A 40 440 154 HOH HOH . C 3 HOH A 41 441 178 HOH HOH . C 3 HOH A 42 442 25 HOH HOH . C 3 HOH A 43 443 160 HOH HOH . C 3 HOH A 44 444 146 HOH HOH . C 3 HOH A 45 445 33 HOH HOH . C 3 HOH A 46 446 10 HOH HOH . C 3 HOH A 47 447 147 HOH HOH . C 3 HOH A 48 448 92 HOH HOH . C 3 HOH A 49 449 52 HOH HOH . C 3 HOH A 50 450 84 HOH HOH . C 3 HOH A 51 451 87 HOH HOH . C 3 HOH A 52 452 186 HOH HOH . C 3 HOH A 53 453 44 HOH HOH . C 3 HOH A 54 454 77 HOH HOH . C 3 HOH A 55 455 223 HOH HOH . C 3 HOH A 56 456 64 HOH HOH . C 3 HOH A 57 457 51 HOH HOH . C 3 HOH A 58 458 34 HOH HOH . C 3 HOH A 59 459 185 HOH HOH . C 3 HOH A 60 460 132 HOH HOH . C 3 HOH A 61 461 217 HOH HOH . C 3 HOH A 62 462 189 HOH HOH . C 3 HOH A 63 463 14 HOH HOH . C 3 HOH A 64 464 133 HOH HOH . C 3 HOH A 65 465 124 HOH HOH . C 3 HOH A 66 466 162 HOH HOH . C 3 HOH A 67 467 89 HOH HOH . C 3 HOH A 68 468 88 HOH HOH . C 3 HOH A 69 469 2 HOH HOH . C 3 HOH A 70 470 24 HOH HOH . C 3 HOH A 71 471 142 HOH HOH . C 3 HOH A 72 472 195 HOH HOH . C 3 HOH A 73 473 47 HOH HOH . C 3 HOH A 74 474 66 HOH HOH . C 3 HOH A 75 475 50 HOH HOH . C 3 HOH A 76 476 204 HOH HOH . C 3 HOH A 77 477 239 HOH HOH . C 3 HOH A 78 478 18 HOH HOH . C 3 HOH A 79 479 202 HOH HOH . C 3 HOH A 80 480 150 HOH HOH . C 3 HOH A 81 481 115 HOH HOH . C 3 HOH A 82 482 85 HOH HOH . C 3 HOH A 83 483 1 HOH HOH . C 3 HOH A 84 484 9 HOH HOH . C 3 HOH A 85 485 117 HOH HOH . C 3 HOH A 86 486 71 HOH HOH . C 3 HOH A 87 487 54 HOH HOH . C 3 HOH A 88 488 13 HOH HOH . C 3 HOH A 89 489 12 HOH HOH . C 3 HOH A 90 490 49 HOH HOH . C 3 HOH A 91 491 156 HOH HOH . C 3 HOH A 92 492 174 HOH HOH . C 3 HOH A 93 493 119 HOH HOH . C 3 HOH A 94 494 29 HOH HOH . C 3 HOH A 95 495 81 HOH HOH . C 3 HOH A 96 496 79 HOH HOH . C 3 HOH A 97 497 39 HOH HOH . C 3 HOH A 98 498 177 HOH HOH . C 3 HOH A 99 499 90 HOH HOH . C 3 HOH A 100 500 86 HOH HOH . C 3 HOH A 101 501 48 HOH HOH . C 3 HOH A 102 502 82 HOH HOH . C 3 HOH A 103 503 32 HOH HOH . C 3 HOH A 104 504 200 HOH HOH . C 3 HOH A 105 505 43 HOH HOH . C 3 HOH A 106 506 116 HOH HOH . C 3 HOH A 107 507 209 HOH HOH . C 3 HOH A 108 508 61 HOH HOH . C 3 HOH A 109 509 36 HOH HOH . C 3 HOH A 110 510 56 HOH HOH . C 3 HOH A 111 511 26 HOH HOH . C 3 HOH A 112 512 31 HOH HOH . C 3 HOH A 113 513 234 HOH HOH . C 3 HOH A 114 514 104 HOH HOH . C 3 HOH A 115 515 114 HOH HOH . C 3 HOH A 116 516 3 HOH HOH . C 3 HOH A 117 517 153 HOH HOH . C 3 HOH A 118 518 72 HOH HOH . C 3 HOH A 119 519 206 HOH HOH . C 3 HOH A 120 520 105 HOH HOH . C 3 HOH A 121 521 113 HOH HOH . C 3 HOH A 122 522 16 HOH HOH . C 3 HOH A 123 523 197 HOH HOH . C 3 HOH A 124 524 175 HOH HOH . C 3 HOH A 125 525 19 HOH HOH . C 3 HOH A 126 526 99 HOH HOH . C 3 HOH A 127 527 70 HOH HOH . C 3 HOH A 128 528 190 HOH HOH . C 3 HOH A 129 529 23 HOH HOH . C 3 HOH A 130 530 95 HOH HOH . C 3 HOH A 131 531 167 HOH HOH . C 3 HOH A 132 532 45 HOH HOH . C 3 HOH A 133 533 96 HOH HOH . C 3 HOH A 134 534 5 HOH HOH . C 3 HOH A 135 535 136 HOH HOH . C 3 HOH A 136 536 168 HOH HOH . C 3 HOH A 137 537 58 HOH HOH . C 3 HOH A 138 538 15 HOH HOH . C 3 HOH A 139 539 166 HOH HOH . C 3 HOH A 140 540 20 HOH HOH . C 3 HOH A 141 541 17 HOH HOH . C 3 HOH A 142 542 123 HOH HOH . C 3 HOH A 143 543 6 HOH HOH . C 3 HOH A 144 544 69 HOH HOH . C 3 HOH A 145 545 145 HOH HOH . C 3 HOH A 146 546 78 HOH HOH . C 3 HOH A 147 547 27 HOH HOH . C 3 HOH A 148 548 143 HOH HOH . C 3 HOH A 149 549 179 HOH HOH . C 3 HOH A 150 550 108 HOH HOH . C 3 HOH A 151 551 176 HOH HOH . C 3 HOH A 152 552 37 HOH HOH . C 3 HOH A 153 553 199 HOH HOH . C 3 HOH A 154 554 40 HOH HOH . C 3 HOH A 155 555 35 HOH HOH . C 3 HOH A 156 556 98 HOH HOH . C 3 HOH A 157 557 193 HOH HOH . C 3 HOH A 158 558 4 HOH HOH . C 3 HOH A 159 559 148 HOH HOH . C 3 HOH A 160 560 173 HOH HOH . C 3 HOH A 161 561 158 HOH HOH . C 3 HOH A 162 562 164 HOH HOH . C 3 HOH A 163 563 228 HOH HOH . C 3 HOH A 164 564 28 HOH HOH . C 3 HOH A 165 565 152 HOH HOH . C 3 HOH A 166 566 73 HOH HOH . C 3 HOH A 167 567 237 HOH HOH . C 3 HOH A 168 568 155 HOH HOH . C 3 HOH A 169 569 194 HOH HOH . C 3 HOH A 170 570 100 HOH HOH . C 3 HOH A 171 571 233 HOH HOH . C 3 HOH A 172 572 232 HOH HOH . C 3 HOH A 173 573 236 HOH HOH . C 3 HOH A 174 574 218 HOH HOH . C 3 HOH A 175 575 205 HOH HOH . C 3 HOH A 176 576 214 HOH HOH . C 3 HOH A 177 577 163 HOH HOH . C 3 HOH A 178 578 225 HOH HOH . C 3 HOH A 179 579 222 HOH HOH . C 3 HOH A 180 580 169 HOH HOH . C 3 HOH A 181 581 110 HOH HOH . C 3 HOH A 182 582 103 HOH HOH . C 3 HOH A 183 583 157 HOH HOH . C 3 HOH A 184 584 159 HOH HOH . C 3 HOH A 185 585 241 HOH HOH . C 3 HOH A 186 586 127 HOH HOH . C 3 HOH A 187 587 60 HOH HOH . C 3 HOH A 188 588 106 HOH HOH . C 3 HOH A 189 589 242 HOH HOH . C 3 HOH A 190 590 219 HOH HOH . C 3 HOH A 191 591 184 HOH HOH . C 3 HOH A 192 592 75 HOH HOH . C 3 HOH A 193 593 243 HOH HOH . C 3 HOH A 194 594 171 HOH HOH . C 3 HOH A 195 595 126 HOH HOH . C 3 HOH A 196 596 125 HOH HOH . C 3 HOH A 197 597 129 HOH HOH . C 3 HOH A 198 598 65 HOH HOH . C 3 HOH A 199 599 130 HOH HOH . C 3 HOH A 200 600 201 HOH HOH . C 3 HOH A 201 601 67 HOH HOH . C 3 HOH A 202 602 122 HOH HOH . C 3 HOH A 203 603 11 HOH HOH . C 3 HOH A 204 604 91 HOH HOH . C 3 HOH A 205 605 120 HOH HOH . C 3 HOH A 206 606 216 HOH HOH . C 3 HOH A 207 607 112 HOH HOH . C 3 HOH A 208 608 183 HOH HOH . C 3 HOH A 209 609 220 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 ID1 . . . B 2 -23.006 11.654 -17.289 1 21.39 ? C7 ID1 301 A 1 HETATM 2 C C2 ID1 . . . B 2 -27.166 10.697 -16.274 1 30.14 ? C2 ID1 301 A 1 HETATM 3 C C6 ID1 . . . B 2 -24.183 12.168 -16.475 1 22.97 ? C6 ID1 301 A 1 HETATM 4 C C5 ID1 . . . B 2 -24.818 11.012 -15.7 1 22.66 ? C5 ID1 301 A 1 HETATM 5 C C3 ID1 . . . B 2 -26.248 9.813 -17.03 1 29.74 ? C3 ID1 301 A 1 HETATM 6 O O7 ID1 . . . B 2 -23.069 11.488 -18.498 1 16.83 ? O7 ID1 301 A 1 HETATM 7 C C61 ID1 . . . B 2 -23.732 13.3 -15.537 1 29.62 ? C61 ID1 301 A 1 HETATM 8 O O62 ID1 . . . B 2 -22.969 14.249 -16.295 1 30.38 ? O62 ID1 301 A 1 HETATM 9 C C62 ID1 . . . B 2 -22.878 12.819 -14.355 1 36.5 ? C62 ID1 301 A 1 HETATM 10 N N4 ID1 . . . B 2 -25.043 9.973 -16.698 1 23.68 ? N4 ID1 301 A 1 HETATM 11 C C31 ID1 . . . B 2 -26.685 8.874 -18.058 1 29.61 ? C31 ID1 301 A 1 HETATM 12 O O31 ID1 . . . B 2 -25.839 8.435 -18.871 1 23.16 ? O31 ID1 301 A 1 HETATM 13 O O32 ID1 . . . B 2 -27.898 8.537 -18.092 1 30.35 ? O32 ID1 301 A 1 HETATM 14 S S21 ID1 . . . B 2 -27.807 11.905 -17.377 1 42.96 ? S21 ID1 301 A 1 HETATM 15 C C22 ID1 . . . B 2 -28.991 12.828 -16.449 1 45.4 ? C22 ID1 301 A 1 HETATM 16 C C23 ID1 . . . B 2 -29.886 13.656 -17.361 1 39.86 ? C23 ID1 301 A 1 HETATM 17 N N24 ID1 . . . B 2 -30.734 12.828 -18.195 1 37.2 ? N24 ID1 301 A 1 HETATM 18 C C25 ID1 . . . B 2 -31.156 13.31 -19.361 1 30.31 ? C25 ID1 301 A 1 HETATM 19 N N26 ID1 . . . B 2 -30.779 14.452 -19.733 1 26.9 ? N26 ID1 301 A 1 HETATM 20 C C1 ID1 . . . B 2 -26.244 11.347 -15.26 1 29.88 ? C1 ID1 301 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 20 #