data_6N6V # _model_server_result.job_id zsbGMltKFCRfXqGXJ1piDQ _model_server_result.datetime_utc '2024-11-15 08:19:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n6v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6N6V # _exptl.entry_id 6N6V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 385.478 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'meropenem,bound form' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6N6V _cell.length_a 136.114 _cell.length_b 44.012 _cell.length_c 46.222 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N6V _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 48 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 79 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C7 _struct_conn.ptnr2_label_comp_id KE1 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id KE1 _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.395 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C17 H27 N3 O5 S' _chem_comp.formula_weight 385.478 _chem_comp.id KE1 _chem_comp.mon_nstd_flag . _chem_comp.name 'meropenem, bound form' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(4R,5S)-3-{[(3R,5R)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-4,5-d ihydro-1H-pyrrole-2-carboxylic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O32 C31 KE1 doub 160 n n O7 C7 KE1 doub 161 n n C4A C1A KE1 sing 162 n n C4A C5A KE1 sing 163 n n O31 C31 KE1 sing 164 n n C1A S21 KE1 sing 165 n n C1A C2A KE1 sing 166 n n C31 C3 KE1 sing 167 n n S21 C2 KE1 sing 168 n n C7 C6 KE1 sing 169 n n C5A N3A KE1 sing 170 n n C5A C6A KE1 sing 171 n n C2A N3A KE1 sing 172 n n C3 N4 KE1 sing 173 n n C3 C2 KE1 doub 174 n n N4 C5 KE1 sing 175 n n C6 C5 KE1 sing 176 n n C6 C61 KE1 sing 177 n n C2 C1 KE1 sing 178 n n O62 C61 KE1 sing 179 n n O6A C6A KE1 doub 180 n n C6A N7A KE1 sing 181 n n C5 C1 KE1 sing 182 n n C61 C62 KE1 sing 183 n n C1 C11 KE1 sing 184 n n N7A C8A KE1 sing 185 n n N7A C9A KE1 sing 186 n n C1 H1 KE1 sing 187 n n C5 H4 KE1 sing 188 n n C7 H5 KE1 sing 189 n n C11 H7 KE1 sing 190 n n C11 H8 KE1 sing 191 n n C11 H9 KE1 sing 192 n n C1A H10 KE1 sing 193 n n C2A H11 KE1 sing 194 n n C2A H12 KE1 sing 195 n n C4A H13 KE1 sing 196 n n C4A H14 KE1 sing 197 n n C5A H15 KE1 sing 198 n n C6 H16 KE1 sing 199 n n C61 H17 KE1 sing 200 n n C62 H18 KE1 sing 201 n n C62 H19 KE1 sing 202 n n C62 H20 KE1 sing 203 n n C8A H21 KE1 sing 204 n n C8A H22 KE1 sing 205 n n C8A H23 KE1 sing 206 n n C9A H24 KE1 sing 207 n n C9A H25 KE1 sing 208 n n C9A H26 KE1 sing 209 n n N3A H27 KE1 sing 210 n n N4 H29 KE1 sing 211 n n O31 H31 KE1 sing 212 n n O62 H32 KE1 sing 213 n n # _atom_sites.entry_id 6N6V _atom_sites.fract_transf_matrix[1][1] 0.007347 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022721 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021635 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KE1 A 1 301 301 KE1 MER . C 3 HOH A 1 401 247 HOH HOH . C 3 HOH A 2 402 199 HOH HOH . C 3 HOH A 3 403 122 HOH HOH . C 3 HOH A 4 404 263 HOH HOH . C 3 HOH A 5 405 229 HOH HOH . C 3 HOH A 6 406 192 HOH HOH . C 3 HOH A 7 407 191 HOH HOH . C 3 HOH A 8 408 34 HOH HOH . C 3 HOH A 9 409 204 HOH HOH . C 3 HOH A 10 410 196 HOH HOH . C 3 HOH A 11 411 41 HOH HOH . C 3 HOH A 12 412 95 HOH HOH . C 3 HOH A 13 413 129 HOH HOH . C 3 HOH A 14 414 235 HOH HOH . C 3 HOH A 15 415 17 HOH HOH . C 3 HOH A 16 416 183 HOH HOH . C 3 HOH A 17 417 232 HOH HOH . C 3 HOH A 18 418 203 HOH HOH . C 3 HOH A 19 419 31 HOH HOH . C 3 HOH A 20 420 48 HOH HOH . C 3 HOH A 21 421 93 HOH HOH . C 3 HOH A 22 422 38 HOH HOH . C 3 HOH A 23 423 202 HOH HOH . C 3 HOH A 24 424 172 HOH HOH . C 3 HOH A 25 425 81 HOH HOH . C 3 HOH A 26 426 126 HOH HOH . C 3 HOH A 27 427 26 HOH HOH . C 3 HOH A 28 428 210 HOH HOH . C 3 HOH A 29 429 52 HOH HOH . C 3 HOH A 30 430 51 HOH HOH . C 3 HOH A 31 431 82 HOH HOH . C 3 HOH A 32 432 25 HOH HOH . C 3 HOH A 33 433 1 HOH HOH . C 3 HOH A 34 434 85 HOH HOH . C 3 HOH A 35 435 84 HOH HOH . C 3 HOH A 36 436 212 HOH HOH . C 3 HOH A 37 437 100 HOH HOH . C 3 HOH A 38 438 44 HOH HOH . C 3 HOH A 39 439 15 HOH HOH . C 3 HOH A 40 440 66 HOH HOH . C 3 HOH A 41 441 228 HOH HOH . C 3 HOH A 42 442 120 HOH HOH . C 3 HOH A 43 443 61 HOH HOH . C 3 HOH A 44 444 116 HOH HOH . C 3 HOH A 45 445 223 HOH HOH . C 3 HOH A 46 446 89 HOH HOH . C 3 HOH A 47 447 144 HOH HOH . C 3 HOH A 48 448 18 HOH HOH . C 3 HOH A 49 449 128 HOH HOH . C 3 HOH A 50 450 173 HOH HOH . C 3 HOH A 51 451 220 HOH HOH . C 3 HOH A 52 452 112 HOH HOH . C 3 HOH A 53 453 206 HOH HOH . C 3 HOH A 54 454 21 HOH HOH . C 3 HOH A 55 455 75 HOH HOH . C 3 HOH A 56 456 209 HOH HOH . C 3 HOH A 57 457 125 HOH HOH . C 3 HOH A 58 458 117 HOH HOH . C 3 HOH A 59 459 198 HOH HOH . C 3 HOH A 60 460 115 HOH HOH . C 3 HOH A 61 461 16 HOH HOH . C 3 HOH A 62 462 68 HOH HOH . C 3 HOH A 63 463 145 HOH HOH . C 3 HOH A 64 464 138 HOH HOH . C 3 HOH A 65 465 216 HOH HOH . C 3 HOH A 66 466 211 HOH HOH . C 3 HOH A 67 467 58 HOH HOH . C 3 HOH A 68 468 137 HOH HOH . C 3 HOH A 69 469 239 HOH HOH . C 3 HOH A 70 470 87 HOH HOH . C 3 HOH A 71 471 197 HOH HOH . C 3 HOH A 72 472 83 HOH HOH . C 3 HOH A 73 473 43 HOH HOH . C 3 HOH A 74 474 11 HOH HOH . C 3 HOH A 75 475 53 HOH HOH . C 3 HOH A 76 476 165 HOH HOH . C 3 HOH A 77 477 19 HOH HOH . C 3 HOH A 78 478 33 HOH HOH . C 3 HOH A 79 479 86 HOH HOH . C 3 HOH A 80 480 222 HOH HOH . C 3 HOH A 81 481 37 HOH HOH . C 3 HOH A 82 482 123 HOH HOH . C 3 HOH A 83 483 176 HOH HOH . C 3 HOH A 84 484 50 HOH HOH . C 3 HOH A 85 485 221 HOH HOH . C 3 HOH A 86 486 9 HOH HOH . C 3 HOH A 87 487 56 HOH HOH . C 3 HOH A 88 488 205 HOH HOH . C 3 HOH A 89 489 72 HOH HOH . C 3 HOH A 90 490 207 HOH HOH . C 3 HOH A 91 491 39 HOH HOH . C 3 HOH A 92 492 6 HOH HOH . C 3 HOH A 93 493 195 HOH HOH . C 3 HOH A 94 494 88 HOH HOH . C 3 HOH A 95 495 127 HOH HOH . C 3 HOH A 96 496 36 HOH HOH . C 3 HOH A 97 497 251 HOH HOH . C 3 HOH A 98 498 167 HOH HOH . C 3 HOH A 99 499 164 HOH HOH . C 3 HOH A 100 500 14 HOH HOH . C 3 HOH A 101 501 171 HOH HOH . C 3 HOH A 102 502 8 HOH HOH . C 3 HOH A 103 503 45 HOH HOH . C 3 HOH A 104 504 124 HOH HOH . C 3 HOH A 105 505 22 HOH HOH . C 3 HOH A 106 506 262 HOH HOH . C 3 HOH A 107 507 166 HOH HOH . C 3 HOH A 108 508 30 HOH HOH . C 3 HOH A 109 509 65 HOH HOH . C 3 HOH A 110 510 20 HOH HOH . C 3 HOH A 111 511 60 HOH HOH . C 3 HOH A 112 512 143 HOH HOH . C 3 HOH A 113 513 10 HOH HOH . C 3 HOH A 114 514 170 HOH HOH . C 3 HOH A 115 515 174 HOH HOH . C 3 HOH A 116 516 102 HOH HOH . C 3 HOH A 117 517 78 HOH HOH . C 3 HOH A 118 518 35 HOH HOH . C 3 HOH A 119 519 135 HOH HOH . C 3 HOH A 120 520 200 HOH HOH . C 3 HOH A 121 521 27 HOH HOH . C 3 HOH A 122 522 7 HOH HOH . C 3 HOH A 123 523 152 HOH HOH . C 3 HOH A 124 524 49 HOH HOH . C 3 HOH A 125 525 218 HOH HOH . C 3 HOH A 126 526 238 HOH HOH . C 3 HOH A 127 527 71 HOH HOH . C 3 HOH A 128 528 3 HOH HOH . C 3 HOH A 129 529 136 HOH HOH . C 3 HOH A 130 530 54 HOH HOH . C 3 HOH A 131 531 2 HOH HOH . C 3 HOH A 132 532 80 HOH HOH . C 3 HOH A 133 533 77 HOH HOH . C 3 HOH A 134 534 59 HOH HOH . C 3 HOH A 135 535 12 HOH HOH . C 3 HOH A 136 536 130 HOH HOH . C 3 HOH A 137 537 208 HOH HOH . C 3 HOH A 138 538 234 HOH HOH . C 3 HOH A 139 539 194 HOH HOH . C 3 HOH A 140 540 215 HOH HOH . C 3 HOH A 141 541 236 HOH HOH . C 3 HOH A 142 542 24 HOH HOH . C 3 HOH A 143 543 214 HOH HOH . C 3 HOH A 144 544 254 HOH HOH . C 3 HOH A 145 545 230 HOH HOH . C 3 HOH A 146 546 253 HOH HOH . C 3 HOH A 147 547 219 HOH HOH . C 3 HOH A 148 548 240 HOH HOH . C 3 HOH A 149 549 246 HOH HOH . C 3 HOH A 150 550 242 HOH HOH . C 3 HOH A 151 551 226 HOH HOH . C 3 HOH A 152 552 249 HOH HOH . C 3 HOH A 153 553 237 HOH HOH . C 3 HOH A 154 554 107 HOH HOH . C 3 HOH A 155 555 201 HOH HOH . C 3 HOH A 156 556 243 HOH HOH . C 3 HOH A 157 557 248 HOH HOH . C 3 HOH A 158 558 241 HOH HOH . C 3 HOH A 159 559 193 HOH HOH . C 3 HOH A 160 560 46 HOH HOH . C 3 HOH A 161 561 91 HOH HOH . C 3 HOH A 162 562 73 HOH HOH . C 3 HOH A 163 563 29 HOH HOH . C 3 HOH A 164 564 267 HOH HOH . C 3 HOH A 165 565 252 HOH HOH . C 3 HOH A 166 566 268 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 KE1 . . . B 2 26.264 10.642 8.104 1 23.48 ? C1 KE1 301 A 1 HETATM 2 C C2 KE1 . . . B 2 27.128 11.145 6.962 1 24.6 ? C2 KE1 301 A 1 HETATM 3 C C3 KE1 . . . B 2 26.187 12.098 6.325 1 26.1 ? C3 KE1 301 A 1 HETATM 4 C C5 KE1 . . . B 2 24.789 10.871 7.698 1 21.97 ? C5 KE1 301 A 1 HETATM 5 C C7 KE1 . . . B 2 22.924 10.365 6.135 1 19.72 ? C7 KE1 301 A 1 HETATM 6 C C11 KE1 . . . B 2 26.671 9.232 8.524 1 32.19 ? C11 KE1 301 A 1 HETATM 7 C C1A KE1 . . . B 2 29.168 9.886 5.29 1 43.03 ? C1A KE1 301 A 1 HETATM 8 C C2A KE1 . . . B 2 30.012 10.692 6.266 1 49.53 ? C2A KE1 301 A 1 HETATM 9 C C31 KE1 . . . B 2 26.602 13.075 5.323 1 27.05 ? C31 KE1 301 A 1 HETATM 10 C C4A KE1 . . . B 2 29.777 8.487 5.268 1 45.56 ? C4A KE1 301 A 1 HETATM 11 C C5A KE1 . . . B 2 31.004 8.516 6.177 1 45.94 ? C5A KE1 301 A 1 HETATM 12 C C6 KE1 . . . B 2 24.087 9.751 6.911 1 19.08 ? C6 KE1 301 A 1 HETATM 13 C C61 KE1 . . . B 2 23.534 8.601 7.77 1 25 ? C61 KE1 301 A 1 HETATM 14 C C62 KE1 . . . B 2 22.719 9.071 8.972 1 29.19 ? C62 KE1 301 A 1 HETATM 15 C C6A KE1 . . . B 2 30.752 7.624 7.379 1 57.99 ? C6A KE1 301 A 1 HETATM 16 C C8A KE1 . . . B 2 31.217 9.152 9.324 1 59.13 ? C8A KE1 301 A 1 HETATM 17 C C9A KE1 . . . B 2 29.524 7.416 9.464 1 50.33 ? C9A KE1 301 A 1 HETATM 18 N N3A KE1 . . . B 2 31.269 9.947 6.45 1 50.19 ? N3A KE1 301 A 1 HETATM 19 N N4 KE1 . . . B 2 24.99 11.953 6.722 1 23.63 ? N4 KE1 301 A 1 HETATM 20 N N7A KE1 . . . B 2 30.525 8.069 8.63 1 59.54 ? N7A KE1 301 A 1 HETATM 21 O O31 KE1 . . . B 2 27.804 13.425 5.282 1 26.95 ? O31 KE1 301 A 1 HETATM 22 O O32 KE1 . . . B 2 25.759 13.535 4.527 1 22.28 ? O32 KE1 301 A 1 HETATM 23 O O62 KE1 . . . B 2 22.726 7.733 6.973 1 30.87 ? O62 KE1 301 A 1 HETATM 24 O O6A KE1 . . . B 2 30.729 6.419 7.17 1 60.17 ? O6A KE1 301 A 1 HETATM 25 O O7 KE1 . . . B 2 23.067 10.368 4.722 1 19.42 ? O7 KE1 301 A 1 HETATM 26 S S21 KE1 . . . B 2 27.478 9.841 5.819 1 32.89 ? S21 KE1 301 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 246 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 26 #