data_6N7B # _model_server_result.job_id KMIxGIOYR1NgvHIfDR462g _model_server_result.datetime_utc '2024-11-22 09:34:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n7b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1202}' # _entry.id 6N7B # _exptl.entry_id 6N7B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6N7B _cell.length_a 170.285 _cell.length_b 42.788 _cell.length_c 44.986 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N7B _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 181 A GLU 1033 1_555 A N PTR 182 A PTR 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale2 A C PTR 182 A PTR 1034 1_555 A N PTR 183 A PTR 1035 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale3 A C PTR 183 A PTR 1035 1_555 A N THR 184 A THR 1036 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6N7B _atom_sites.fract_transf_matrix[1][1] 0.005873 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023371 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022229 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KEY A 1 1201 1 KEY DRG . C 3 GOL A 1 1202 1 GOL GOL . D 3 GOL A 1 1203 2 GOL GOL . E 4 HOH A 1 1301 130 HOH HOH . E 4 HOH A 2 1302 27 HOH HOH . E 4 HOH A 3 1303 62 HOH HOH . E 4 HOH A 4 1304 5 HOH HOH . E 4 HOH A 5 1305 105 HOH HOH . E 4 HOH A 6 1306 7 HOH HOH . E 4 HOH A 7 1307 133 HOH HOH . E 4 HOH A 8 1308 92 HOH HOH . E 4 HOH A 9 1309 112 HOH HOH . E 4 HOH A 10 1310 91 HOH HOH . E 4 HOH A 11 1311 56 HOH HOH . E 4 HOH A 12 1312 78 HOH HOH . E 4 HOH A 13 1313 33 HOH HOH . E 4 HOH A 14 1314 26 HOH HOH . E 4 HOH A 15 1315 46 HOH HOH . E 4 HOH A 16 1316 4 HOH HOH . E 4 HOH A 17 1317 107 HOH HOH . E 4 HOH A 18 1318 47 HOH HOH . E 4 HOH A 19 1319 124 HOH HOH . E 4 HOH A 20 1320 34 HOH HOH . E 4 HOH A 21 1321 29 HOH HOH . E 4 HOH A 22 1322 13 HOH HOH . E 4 HOH A 23 1323 94 HOH HOH . E 4 HOH A 24 1324 103 HOH HOH . E 4 HOH A 25 1325 80 HOH HOH . E 4 HOH A 26 1326 55 HOH HOH . E 4 HOH A 27 1327 23 HOH HOH . E 4 HOH A 28 1328 61 HOH HOH . E 4 HOH A 29 1329 93 HOH HOH . E 4 HOH A 30 1330 86 HOH HOH . E 4 HOH A 31 1331 2 HOH HOH . E 4 HOH A 32 1332 90 HOH HOH . E 4 HOH A 33 1333 65 HOH HOH . E 4 HOH A 34 1334 97 HOH HOH . E 4 HOH A 35 1335 52 HOH HOH . E 4 HOH A 36 1336 122 HOH HOH . E 4 HOH A 37 1337 64 HOH HOH . E 4 HOH A 38 1338 66 HOH HOH . E 4 HOH A 39 1339 73 HOH HOH . E 4 HOH A 40 1340 51 HOH HOH . E 4 HOH A 41 1341 20 HOH HOH . E 4 HOH A 42 1342 129 HOH HOH . E 4 HOH A 43 1343 74 HOH HOH . E 4 HOH A 44 1344 3 HOH HOH . E 4 HOH A 45 1345 18 HOH HOH . E 4 HOH A 46 1346 137 HOH HOH . E 4 HOH A 47 1347 76 HOH HOH . E 4 HOH A 48 1348 12 HOH HOH . E 4 HOH A 49 1349 108 HOH HOH . E 4 HOH A 50 1350 142 HOH HOH . E 4 HOH A 51 1351 6 HOH HOH . E 4 HOH A 52 1352 109 HOH HOH . E 4 HOH A 53 1353 49 HOH HOH . E 4 HOH A 54 1354 10 HOH HOH . E 4 HOH A 55 1355 9 HOH HOH . E 4 HOH A 56 1356 54 HOH HOH . E 4 HOH A 57 1357 36 HOH HOH . E 4 HOH A 58 1358 126 HOH HOH . E 4 HOH A 59 1359 141 HOH HOH . E 4 HOH A 60 1360 134 HOH HOH . E 4 HOH A 61 1361 41 HOH HOH . E 4 HOH A 62 1362 60 HOH HOH . E 4 HOH A 63 1363 45 HOH HOH . E 4 HOH A 64 1364 84 HOH HOH . E 4 HOH A 65 1365 135 HOH HOH . E 4 HOH A 66 1366 48 HOH HOH . E 4 HOH A 67 1367 17 HOH HOH . E 4 HOH A 68 1368 154 HOH HOH . E 4 HOH A 69 1369 139 HOH HOH . E 4 HOH A 70 1370 82 HOH HOH . E 4 HOH A 71 1371 67 HOH HOH . E 4 HOH A 72 1372 87 HOH HOH . E 4 HOH A 73 1373 19 HOH HOH . E 4 HOH A 74 1374 104 HOH HOH . E 4 HOH A 75 1375 120 HOH HOH . E 4 HOH A 76 1376 119 HOH HOH . E 4 HOH A 77 1377 69 HOH HOH . E 4 HOH A 78 1378 132 HOH HOH . E 4 HOH A 79 1379 149 HOH HOH . E 4 HOH A 80 1380 116 HOH HOH . E 4 HOH A 81 1381 15 HOH HOH . E 4 HOH A 82 1382 63 HOH HOH . E 4 HOH A 83 1383 57 HOH HOH . E 4 HOH A 84 1384 75 HOH HOH . E 4 HOH A 85 1385 53 HOH HOH . E 4 HOH A 86 1386 71 HOH HOH . E 4 HOH A 87 1387 59 HOH HOH . E 4 HOH A 88 1388 25 HOH HOH . E 4 HOH A 89 1389 72 HOH HOH . E 4 HOH A 90 1390 106 HOH HOH . E 4 HOH A 91 1391 32 HOH HOH . E 4 HOH A 92 1392 125 HOH HOH . E 4 HOH A 93 1393 21 HOH HOH . E 4 HOH A 94 1394 11 HOH HOH . E 4 HOH A 95 1395 24 HOH HOH . E 4 HOH A 96 1396 77 HOH HOH . E 4 HOH A 97 1397 31 HOH HOH . E 4 HOH A 98 1398 1 HOH HOH . E 4 HOH A 99 1399 16 HOH HOH . E 4 HOH A 100 1400 22 HOH HOH . E 4 HOH A 101 1401 28 HOH HOH . E 4 HOH A 102 1402 153 HOH HOH . E 4 HOH A 103 1403 136 HOH HOH . E 4 HOH A 104 1404 83 HOH HOH . E 4 HOH A 105 1405 111 HOH HOH . E 4 HOH A 106 1406 144 HOH HOH . E 4 HOH A 107 1407 14 HOH HOH . E 4 HOH A 108 1408 8 HOH HOH . E 4 HOH A 109 1409 145 HOH HOH . E 4 HOH A 110 1410 70 HOH HOH . E 4 HOH A 111 1411 42 HOH HOH . E 4 HOH A 112 1412 158 HOH HOH . E 4 HOH A 113 1413 100 HOH HOH . E 4 HOH A 114 1414 102 HOH HOH . E 4 HOH A 115 1415 157 HOH HOH . E 4 HOH A 116 1416 95 HOH HOH . E 4 HOH A 117 1417 148 HOH HOH . E 4 HOH A 118 1418 35 HOH HOH . E 4 HOH A 119 1419 44 HOH HOH . E 4 HOH A 120 1420 88 HOH HOH . E 4 HOH A 121 1421 131 HOH HOH . E 4 HOH A 122 1422 68 HOH HOH . E 4 HOH A 123 1423 155 HOH HOH . E 4 HOH A 124 1424 156 HOH HOH . E 4 HOH A 125 1425 128 HOH HOH . E 4 HOH A 126 1426 58 HOH HOH . E 4 HOH A 127 1427 39 HOH HOH . E 4 HOH A 128 1428 98 HOH HOH . E 4 HOH A 129 1429 150 HOH HOH . E 4 HOH A 130 1430 30 HOH HOH . E 4 HOH A 131 1431 117 HOH HOH . E 4 HOH A 132 1432 50 HOH HOH . E 4 HOH A 133 1433 114 HOH HOH . E 4 HOH A 134 1434 81 HOH HOH . E 4 HOH A 135 1435 40 HOH HOH . E 4 HOH A 136 1436 96 HOH HOH . E 4 HOH A 137 1437 143 HOH HOH . E 4 HOH A 138 1438 121 HOH HOH . E 4 HOH A 139 1439 140 HOH HOH . E 4 HOH A 140 1440 37 HOH HOH . E 4 HOH A 141 1441 115 HOH HOH . E 4 HOH A 142 1442 118 HOH HOH . E 4 HOH A 143 1443 113 HOH HOH . E 4 HOH A 144 1444 152 HOH HOH . E 4 HOH A 145 1445 85 HOH HOH . E 4 HOH A 146 1446 146 HOH HOH . E 4 HOH A 147 1447 43 HOH HOH . E 4 HOH A 148 1448 38 HOH HOH . E 4 HOH A 149 1449 99 HOH HOH . E 4 HOH A 150 1450 101 HOH HOH . E 4 HOH A 151 1451 151 HOH HOH . E 4 HOH A 152 1452 110 HOH HOH . E 4 HOH A 153 1453 138 HOH HOH . E 4 HOH A 154 1454 127 HOH HOH . E 4 HOH A 155 1455 79 HOH HOH . E 4 HOH A 156 1456 89 HOH HOH . E 4 HOH A 157 1457 123 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 -19.343 1.974 -4.366 1 47.12 ? C1 GOL 1202 A 1 HETATM 2 O O1 GOL . . . C 3 -19.112 3.221 -5.018 1 46.28 ? O1 GOL 1202 A 1 HETATM 3 C C2 GOL . . . C 3 -18.63 1.892 -3.035 1 48.56 ? C2 GOL 1202 A 1 HETATM 4 O O2 GOL . . . C 3 -17.215 1.975 -3.231 1 48.91 ? O2 GOL 1202 A 1 HETATM 5 C C3 GOL . . . C 3 -18.965 0.598 -2.328 1 48.41 ? C3 GOL 1202 A 1 HETATM 6 O O3 GOL . . . C 3 -19.196 0.809 -0.938 1 49.41 ? O3 GOL 1202 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #