data_6N7D # _model_server_result.job_id 9Evn3aweHrqc0OjQBzpc_g _model_server_result.datetime_utc '2024-11-30 17:01:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n7d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1202}' # _entry.id 6N7D # _exptl.entry_id 6N7D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6N7D _cell.length_a 169.99 _cell.length_b 42.65 _cell.length_c 44.89 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N7D _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 181 A GLU 1033 1_555 A N PTR 182 A PTR 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.366 ? covale ? covale2 A C PTR 182 A PTR 1034 1_555 A N PTR 183 A PTR 1035 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.387 ? covale ? covale3 A C PTR 183 A PTR 1035 1_555 A N THR 184 A THR 1036 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6N7D _atom_sites.fract_transf_matrix[1][1] 0.005883 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023447 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022277 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KF4 A 1 1201 1 KF4 DRG . C 3 GOL A 1 1202 1 GOL GOL . D 4 HOH A 1 1301 48 HOH HOH . D 4 HOH A 2 1302 35 HOH HOH . D 4 HOH A 3 1303 184 HOH HOH . D 4 HOH A 4 1304 190 HOH HOH . D 4 HOH A 5 1305 42 HOH HOH . D 4 HOH A 6 1306 205 HOH HOH . D 4 HOH A 7 1307 101 HOH HOH . D 4 HOH A 8 1308 11 HOH HOH . D 4 HOH A 9 1309 118 HOH HOH . D 4 HOH A 10 1310 38 HOH HOH . D 4 HOH A 11 1311 51 HOH HOH . D 4 HOH A 12 1312 13 HOH HOH . D 4 HOH A 13 1313 9 HOH HOH . D 4 HOH A 14 1314 3 HOH HOH . D 4 HOH A 15 1315 139 HOH HOH . D 4 HOH A 16 1316 49 HOH HOH . D 4 HOH A 17 1317 22 HOH HOH . D 4 HOH A 18 1318 216 HOH HOH . D 4 HOH A 19 1319 46 HOH HOH . D 4 HOH A 20 1320 56 HOH HOH . D 4 HOH A 21 1321 45 HOH HOH . D 4 HOH A 22 1322 61 HOH HOH . D 4 HOH A 23 1323 198 HOH HOH . D 4 HOH A 24 1324 204 HOH HOH . D 4 HOH A 25 1325 32 HOH HOH . D 4 HOH A 26 1326 33 HOH HOH . D 4 HOH A 27 1327 73 HOH HOH . D 4 HOH A 28 1328 63 HOH HOH . D 4 HOH A 29 1329 219 HOH HOH . D 4 HOH A 30 1330 134 HOH HOH . D 4 HOH A 31 1331 172 HOH HOH . D 4 HOH A 32 1332 170 HOH HOH . D 4 HOH A 33 1333 161 HOH HOH . D 4 HOH A 34 1334 144 HOH HOH . D 4 HOH A 35 1335 214 HOH HOH . D 4 HOH A 36 1336 137 HOH HOH . D 4 HOH A 37 1337 136 HOH HOH . D 4 HOH A 38 1338 20 HOH HOH . D 4 HOH A 39 1339 114 HOH HOH . D 4 HOH A 40 1340 12 HOH HOH . D 4 HOH A 41 1341 77 HOH HOH . D 4 HOH A 42 1342 133 HOH HOH . D 4 HOH A 43 1343 2 HOH HOH . D 4 HOH A 44 1344 193 HOH HOH . D 4 HOH A 45 1345 5 HOH HOH . D 4 HOH A 46 1346 19 HOH HOH . D 4 HOH A 47 1347 111 HOH HOH . D 4 HOH A 48 1348 14 HOH HOH . D 4 HOH A 49 1349 24 HOH HOH . D 4 HOH A 50 1350 168 HOH HOH . D 4 HOH A 51 1351 164 HOH HOH . D 4 HOH A 52 1352 178 HOH HOH . D 4 HOH A 53 1353 81 HOH HOH . D 4 HOH A 54 1354 223 HOH HOH . D 4 HOH A 55 1355 217 HOH HOH . D 4 HOH A 56 1356 211 HOH HOH . D 4 HOH A 57 1357 64 HOH HOH . D 4 HOH A 58 1358 213 HOH HOH . D 4 HOH A 59 1359 163 HOH HOH . D 4 HOH A 60 1360 37 HOH HOH . D 4 HOH A 61 1361 57 HOH HOH . D 4 HOH A 62 1362 200 HOH HOH . D 4 HOH A 63 1363 54 HOH HOH . D 4 HOH A 64 1364 131 HOH HOH . D 4 HOH A 65 1365 94 HOH HOH . D 4 HOH A 66 1366 25 HOH HOH . D 4 HOH A 67 1367 52 HOH HOH . D 4 HOH A 68 1368 10 HOH HOH . D 4 HOH A 69 1369 220 HOH HOH . D 4 HOH A 70 1370 67 HOH HOH . D 4 HOH A 71 1371 226 HOH HOH . D 4 HOH A 72 1372 68 HOH HOH . D 4 HOH A 73 1373 21 HOH HOH . D 4 HOH A 74 1374 18 HOH HOH . D 4 HOH A 75 1375 71 HOH HOH . D 4 HOH A 76 1376 98 HOH HOH . D 4 HOH A 77 1377 39 HOH HOH . D 4 HOH A 78 1378 123 HOH HOH . D 4 HOH A 79 1379 76 HOH HOH . D 4 HOH A 80 1380 26 HOH HOH . D 4 HOH A 81 1381 212 HOH HOH . D 4 HOH A 82 1382 171 HOH HOH . D 4 HOH A 83 1383 145 HOH HOH . D 4 HOH A 84 1384 143 HOH HOH . D 4 HOH A 85 1385 124 HOH HOH . D 4 HOH A 86 1386 66 HOH HOH . D 4 HOH A 87 1387 105 HOH HOH . D 4 HOH A 88 1388 31 HOH HOH . D 4 HOH A 89 1389 1 HOH HOH . D 4 HOH A 90 1390 50 HOH HOH . D 4 HOH A 91 1391 128 HOH HOH . D 4 HOH A 92 1392 69 HOH HOH . D 4 HOH A 93 1393 40 HOH HOH . D 4 HOH A 94 1394 210 HOH HOH . D 4 HOH A 95 1395 4 HOH HOH . D 4 HOH A 96 1396 78 HOH HOH . D 4 HOH A 97 1397 47 HOH HOH . D 4 HOH A 98 1398 148 HOH HOH . D 4 HOH A 99 1399 122 HOH HOH . D 4 HOH A 100 1400 115 HOH HOH . D 4 HOH A 101 1401 199 HOH HOH . D 4 HOH A 102 1402 17 HOH HOH . D 4 HOH A 103 1403 135 HOH HOH . D 4 HOH A 104 1404 36 HOH HOH . D 4 HOH A 105 1405 151 HOH HOH . D 4 HOH A 106 1406 201 HOH HOH . D 4 HOH A 107 1407 138 HOH HOH . D 4 HOH A 108 1408 70 HOH HOH . D 4 HOH A 109 1409 157 HOH HOH . D 4 HOH A 110 1410 55 HOH HOH . D 4 HOH A 111 1411 194 HOH HOH . D 4 HOH A 112 1412 183 HOH HOH . D 4 HOH A 113 1413 16 HOH HOH . D 4 HOH A 114 1414 6 HOH HOH . D 4 HOH A 115 1415 83 HOH HOH . D 4 HOH A 116 1416 102 HOH HOH . D 4 HOH A 117 1417 159 HOH HOH . D 4 HOH A 118 1418 175 HOH HOH . D 4 HOH A 119 1419 84 HOH HOH . D 4 HOH A 120 1420 182 HOH HOH . D 4 HOH A 121 1421 15 HOH HOH . D 4 HOH A 122 1422 44 HOH HOH . D 4 HOH A 123 1423 41 HOH HOH . D 4 HOH A 124 1424 158 HOH HOH . D 4 HOH A 125 1425 96 HOH HOH . D 4 HOH A 126 1426 153 HOH HOH . D 4 HOH A 127 1427 132 HOH HOH . D 4 HOH A 128 1428 8 HOH HOH . D 4 HOH A 129 1429 104 HOH HOH . D 4 HOH A 130 1430 120 HOH HOH . D 4 HOH A 131 1431 117 HOH HOH . D 4 HOH A 132 1432 169 HOH HOH . D 4 HOH A 133 1433 89 HOH HOH . D 4 HOH A 134 1434 156 HOH HOH . D 4 HOH A 135 1435 130 HOH HOH . D 4 HOH A 136 1436 110 HOH HOH . D 4 HOH A 137 1437 59 HOH HOH . D 4 HOH A 138 1438 87 HOH HOH . D 4 HOH A 139 1439 74 HOH HOH . D 4 HOH A 140 1440 60 HOH HOH . D 4 HOH A 141 1441 62 HOH HOH . D 4 HOH A 142 1442 116 HOH HOH . D 4 HOH A 143 1443 85 HOH HOH . D 4 HOH A 144 1444 99 HOH HOH . D 4 HOH A 145 1445 30 HOH HOH . D 4 HOH A 146 1446 225 HOH HOH . D 4 HOH A 147 1447 90 HOH HOH . D 4 HOH A 148 1448 166 HOH HOH . D 4 HOH A 149 1449 106 HOH HOH . D 4 HOH A 150 1450 75 HOH HOH . D 4 HOH A 151 1451 28 HOH HOH . D 4 HOH A 152 1452 113 HOH HOH . D 4 HOH A 153 1453 53 HOH HOH . D 4 HOH A 154 1454 127 HOH HOH . D 4 HOH A 155 1455 160 HOH HOH . D 4 HOH A 156 1456 108 HOH HOH . D 4 HOH A 157 1457 27 HOH HOH . D 4 HOH A 158 1458 154 HOH HOH . D 4 HOH A 159 1459 95 HOH HOH . D 4 HOH A 160 1460 141 HOH HOH . D 4 HOH A 161 1461 29 HOH HOH . D 4 HOH A 162 1462 150 HOH HOH . D 4 HOH A 163 1463 80 HOH HOH . D 4 HOH A 164 1464 100 HOH HOH . D 4 HOH A 165 1465 23 HOH HOH . D 4 HOH A 166 1466 107 HOH HOH . D 4 HOH A 167 1467 58 HOH HOH . D 4 HOH A 168 1468 185 HOH HOH . D 4 HOH A 169 1469 173 HOH HOH . D 4 HOH A 170 1470 189 HOH HOH . D 4 HOH A 171 1471 209 HOH HOH . D 4 HOH A 172 1472 195 HOH HOH . D 4 HOH A 173 1473 206 HOH HOH . D 4 HOH A 174 1474 208 HOH HOH . D 4 HOH A 175 1475 112 HOH HOH . D 4 HOH A 176 1476 92 HOH HOH . D 4 HOH A 177 1477 197 HOH HOH . D 4 HOH A 178 1478 202 HOH HOH . D 4 HOH A 179 1479 203 HOH HOH . D 4 HOH A 180 1480 7 HOH HOH . D 4 HOH A 181 1481 224 HOH HOH . D 4 HOH A 182 1482 43 HOH HOH . D 4 HOH A 183 1483 72 HOH HOH . D 4 HOH A 184 1484 167 HOH HOH . D 4 HOH A 185 1485 215 HOH HOH . D 4 HOH A 186 1486 88 HOH HOH . D 4 HOH A 187 1487 147 HOH HOH . D 4 HOH A 188 1488 222 HOH HOH . D 4 HOH A 189 1489 165 HOH HOH . D 4 HOH A 190 1490 34 HOH HOH . D 4 HOH A 191 1491 97 HOH HOH . D 4 HOH A 192 1492 188 HOH HOH . D 4 HOH A 193 1493 86 HOH HOH . D 4 HOH A 194 1494 125 HOH HOH . D 4 HOH A 195 1495 79 HOH HOH . D 4 HOH A 196 1496 103 HOH HOH . D 4 HOH A 197 1497 177 HOH HOH . D 4 HOH A 198 1498 129 HOH HOH . D 4 HOH A 199 1499 227 HOH HOH . D 4 HOH A 200 1500 155 HOH HOH . D 4 HOH A 201 1501 179 HOH HOH . D 4 HOH A 202 1502 191 HOH HOH . D 4 HOH A 203 1503 121 HOH HOH . D 4 HOH A 204 1504 162 HOH HOH . D 4 HOH A 205 1505 192 HOH HOH . D 4 HOH A 206 1506 109 HOH HOH . D 4 HOH A 207 1507 65 HOH HOH . D 4 HOH A 208 1508 218 HOH HOH . D 4 HOH A 209 1509 221 HOH HOH . D 4 HOH A 210 1510 174 HOH HOH . D 4 HOH A 211 1511 149 HOH HOH . D 4 HOH A 212 1512 126 HOH HOH . D 4 HOH A 213 1513 93 HOH HOH . D 4 HOH A 214 1514 181 HOH HOH . D 4 HOH A 215 1515 186 HOH HOH . D 4 HOH A 216 1516 91 HOH HOH . D 4 HOH A 217 1517 180 HOH HOH . D 4 HOH A 218 1518 146 HOH HOH . D 4 HOH A 219 1519 187 HOH HOH . D 4 HOH A 220 1520 152 HOH HOH . D 4 HOH A 221 1521 82 HOH HOH . D 4 HOH A 222 1522 176 HOH HOH . D 4 HOH A 223 1523 142 HOH HOH . D 4 HOH A 224 1524 119 HOH HOH . D 4 HOH A 225 1525 207 HOH HOH . D 4 HOH A 226 1526 196 HOH HOH . D 4 HOH A 227 1527 140 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 -18.229 1.935 -2.677 1 38.99 ? C1 GOL 1202 A 1 HETATM 2 O O1 GOL . . . C 3 -18.748 0.712 -3.186 1 36.72 ? O1 GOL 1202 A 1 HETATM 3 C C2 GOL . . . C 3 -18.005 2.932 -3.79 1 39.19 ? C2 GOL 1202 A 1 HETATM 4 O O2 GOL . . . C 3 -17.059 2.417 -4.737 1 38.96 ? O2 GOL 1202 A 1 HETATM 5 C C3 GOL . . . C 3 -19.305 3.231 -4.496 1 35.61 ? C3 GOL 1202 A 1 HETATM 6 O O3 GOL . . . C 3 -19.122 4.311 -5.402 1 34.72 ? O3 GOL 1202 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 519 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 6 #