data_6N7Y # _model_server_result.job_id wRlbR-2TnjFc0Da9eJxCRA _model_server_result.datetime_utc '2024-10-19 15:38:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n7y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 6N7Y # _exptl.entry_id 6N7Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 425.441 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(1R)-1-{[6-(4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}-2-phenylethyl]phosphonic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6N7Y _cell.length_a 111.24 _cell.length_b 111.24 _cell.length_c 77.3 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N7Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 111.24 111.24 38.65 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H20 N3 O3 P S' _chem_comp.formula_weight 425.441 _chem_comp.id KFA _chem_comp.mon_nstd_flag . _chem_comp.name '[(1R)-1-{[6-(4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}-2-phenylethyl]phosphonic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAE PAA KFA doub 186 n n N1 C2 KFA doub 187 n y N1 C6 KFA sing 188 n y C2 N3 KFA sing 189 n y SAN C6 KFA sing 190 n y SAN CAM KFA sing 191 n y C6 C5 KFA doub 192 n y N3 C4 KFA doub 193 n y C5 C4 KFA sing 194 n y C5 CAL KFA sing 195 n y PAA OAU KFA sing 196 n n PAA OAD KFA sing 197 n n PAA CAC KFA sing 198 n n CAM CAO KFA sing 199 n n CAM CAL KFA doub 200 n y C4 NAB KFA sing 201 n n CAT CAO KFA doub 202 n y CAT CAS KFA sing 203 n y CAO CAP KFA sing 204 n y CAP CAQ KFA doub 205 n y CAS CAR KFA doub 206 n y CAQ CAR KFA sing 207 n y CAR CAW KFA sing 208 n n NAB CAC KFA sing 209 n n CAC CAV KFA sing 210 n n CAV CAX KFA sing 211 n n CAX CBC KFA doub 212 n y CAX CAY KFA sing 213 n y CBC CBB KFA sing 214 n y CAY CAZ KFA doub 215 n y CBB CBA KFA doub 216 n y CAZ CBA KFA sing 217 n y C2 H1 KFA sing 218 n n CAP H2 KFA sing 219 n n CAQ H3 KFA sing 220 n n CAW H4 KFA sing 221 n n CAW H5 KFA sing 222 n n CAW H6 KFA sing 223 n n CAS H7 KFA sing 224 n n CAT H8 KFA sing 225 n n CAL H9 KFA sing 226 n n NAB H11 KFA sing 227 n n CAC H12 KFA sing 228 n n OAU H13 KFA sing 229 n n OAD H14 KFA sing 230 n n CAV H15 KFA sing 231 n n CAV H16 KFA sing 232 n n CAY H17 KFA sing 233 n n CAZ H18 KFA sing 234 n n CBA H19 KFA sing 235 n n CBB H20 KFA sing 236 n n CBC H21 KFA sing 237 n n # _atom_sites.entry_id 6N7Y _atom_sites.fract_transf_matrix[1][1] 0.00899 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00899 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012937 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL F 1 401 401 GOL GOL . C 3 KFA F 1 402 501 KFA 102 . D 4 PO4 F 1 403 2 PO4 PO4 . E 5 HOH F 1 501 72 HOH HOH . E 5 HOH F 2 502 8 HOH HOH . E 5 HOH F 3 503 58 HOH HOH . E 5 HOH F 4 504 24 HOH HOH . E 5 HOH F 5 505 123 HOH HOH . E 5 HOH F 6 506 67 HOH HOH . E 5 HOH F 7 507 18 HOH HOH . E 5 HOH F 8 508 14 HOH HOH . E 5 HOH F 9 509 91 HOH HOH . E 5 HOH F 10 510 89 HOH HOH . E 5 HOH F 11 511 33 HOH HOH . E 5 HOH F 12 512 68 HOH HOH . E 5 HOH F 13 513 5 HOH HOH . E 5 HOH F 14 514 112 HOH HOH . E 5 HOH F 15 515 51 HOH HOH . E 5 HOH F 16 516 38 HOH HOH . E 5 HOH F 17 517 66 HOH HOH . E 5 HOH F 18 518 4 HOH HOH . E 5 HOH F 19 519 120 HOH HOH . E 5 HOH F 20 520 40 HOH HOH . E 5 HOH F 21 521 17 HOH HOH . E 5 HOH F 22 522 21 HOH HOH . E 5 HOH F 23 523 10 HOH HOH . E 5 HOH F 24 524 44 HOH HOH . E 5 HOH F 25 525 29 HOH HOH . E 5 HOH F 26 526 69 HOH HOH . E 5 HOH F 27 527 76 HOH HOH . E 5 HOH F 28 528 32 HOH HOH . E 5 HOH F 29 529 63 HOH HOH . E 5 HOH F 30 530 62 HOH HOH . E 5 HOH F 31 531 53 HOH HOH . E 5 HOH F 32 532 55 HOH HOH . E 5 HOH F 33 533 130 HOH HOH . E 5 HOH F 34 534 57 HOH HOH . E 5 HOH F 35 535 41 HOH HOH . E 5 HOH F 36 536 84 HOH HOH . E 5 HOH F 37 537 20 HOH HOH . E 5 HOH F 38 538 13 HOH HOH . E 5 HOH F 39 539 31 HOH HOH . E 5 HOH F 40 540 110 HOH HOH . E 5 HOH F 41 541 12 HOH HOH . E 5 HOH F 42 542 88 HOH HOH . E 5 HOH F 43 543 37 HOH HOH . E 5 HOH F 44 544 90 HOH HOH . E 5 HOH F 45 545 95 HOH HOH . E 5 HOH F 46 546 46 HOH HOH . E 5 HOH F 47 547 52 HOH HOH . E 5 HOH F 48 548 22 HOH HOH . E 5 HOH F 49 549 98 HOH HOH . E 5 HOH F 50 550 25 HOH HOH . E 5 HOH F 51 551 28 HOH HOH . E 5 HOH F 52 552 99 HOH HOH . E 5 HOH F 53 553 104 HOH HOH . E 5 HOH F 54 554 78 HOH HOH . E 5 HOH F 55 555 42 HOH HOH . E 5 HOH F 56 556 59 HOH HOH . E 5 HOH F 57 557 49 HOH HOH . E 5 HOH F 58 558 97 HOH HOH . E 5 HOH F 59 559 48 HOH HOH . E 5 HOH F 60 560 45 HOH HOH . E 5 HOH F 61 561 101 HOH HOH . E 5 HOH F 62 562 36 HOH HOH . E 5 HOH F 63 563 111 HOH HOH . E 5 HOH F 64 564 129 HOH HOH . E 5 HOH F 65 565 96 HOH HOH . E 5 HOH F 66 566 7 HOH HOH . E 5 HOH F 67 567 113 HOH HOH . E 5 HOH F 68 568 77 HOH HOH . E 5 HOH F 69 569 54 HOH HOH . E 5 HOH F 70 570 94 HOH HOH . E 5 HOH F 71 571 114 HOH HOH . E 5 HOH F 72 572 70 HOH HOH . E 5 HOH F 73 573 23 HOH HOH . E 5 HOH F 74 574 86 HOH HOH . E 5 HOH F 75 575 60 HOH HOH . E 5 HOH F 76 576 134 HOH HOH . E 5 HOH F 77 577 35 HOH HOH . E 5 HOH F 78 578 50 HOH HOH . E 5 HOH F 79 579 15 HOH HOH . E 5 HOH F 80 580 30 HOH HOH . E 5 HOH F 81 581 39 HOH HOH . E 5 HOH F 82 582 115 HOH HOH . E 5 HOH F 83 583 6 HOH HOH . E 5 HOH F 84 584 106 HOH HOH . E 5 HOH F 85 585 92 HOH HOH . E 5 HOH F 86 586 11 HOH HOH . E 5 HOH F 87 587 125 HOH HOH . E 5 HOH F 88 588 83 HOH HOH . E 5 HOH F 89 589 9 HOH HOH . E 5 HOH F 90 590 71 HOH HOH . E 5 HOH F 91 591 75 HOH HOH . E 5 HOH F 92 592 80 HOH HOH . E 5 HOH F 93 593 47 HOH HOH . E 5 HOH F 94 594 126 HOH HOH . E 5 HOH F 95 595 127 HOH HOH . E 5 HOH F 96 596 16 HOH HOH . E 5 HOH F 97 597 87 HOH HOH . E 5 HOH F 98 598 132 HOH HOH . E 5 HOH F 99 599 81 HOH HOH . E 5 HOH F 100 600 64 HOH HOH . E 5 HOH F 101 601 43 HOH HOH . E 5 HOH F 102 602 3 HOH HOH . E 5 HOH F 103 603 82 HOH HOH . E 5 HOH F 104 604 128 HOH HOH . E 5 HOH F 105 605 34 HOH HOH . E 5 HOH F 106 606 124 HOH HOH . E 5 HOH F 107 607 121 HOH HOH . E 5 HOH F 108 608 119 HOH HOH . E 5 HOH F 109 609 118 HOH HOH . E 5 HOH F 110 610 117 HOH HOH . E 5 HOH F 111 611 65 HOH HOH . E 5 HOH F 112 612 122 HOH HOH . E 5 HOH F 113 613 103 HOH HOH . E 5 HOH F 114 614 136 HOH HOH . E 5 HOH F 115 615 109 HOH HOH . E 5 HOH F 116 616 93 HOH HOH . E 5 HOH F 117 617 108 HOH HOH . E 5 HOH F 118 618 19 HOH HOH . E 5 HOH F 119 619 79 HOH HOH . E 5 HOH F 120 620 131 HOH HOH . E 5 HOH F 121 621 135 HOH HOH . E 5 HOH F 122 622 133 HOH HOH . E 5 HOH F 123 623 2 HOH HOH . E 5 HOH F 124 624 73 HOH HOH . E 5 HOH F 125 625 74 HOH HOH . E 5 HOH F 126 626 116 HOH HOH . E 5 HOH F 127 627 56 HOH HOH . E 5 HOH F 128 628 105 HOH HOH . E 5 HOH F 129 629 61 HOH HOH . E 5 HOH F 130 630 27 HOH HOH . E 5 HOH F 131 631 107 HOH HOH . E 5 HOH F 132 632 100 HOH HOH . E 5 HOH F 133 633 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 KFA . . . C 3 3.446 72.022 28.107 1 106.68 ? C5 KFA 402 F 1 HETATM 2 C C6 KFA . . . C 3 4.743 72.048 27.673 1 98.13 ? C6 KFA 402 F 1 HETATM 3 N N1 KFA . . . C 3 5.444 70.926 27.37 1 119.54 ? N1 KFA 402 F 1 HETATM 4 C C2 KFA . . . C 3 4.863 69.65 27.484 1 118.82 ? C2 KFA 402 F 1 HETATM 5 N N3 KFA . . . C 3 3.545 69.603 27.917 1 108.97 ? N3 KFA 402 F 1 HETATM 6 C C4 KFA . . . C 3 2.894 70.776 28.203 1 122.31 ? C4 KFA 402 F 1 HETATM 7 C CAP KFA . . . C 3 2.224 76.269 28.288 1 81.25 ? CAP KFA 402 F 1 HETATM 8 C CAQ KFA . . . C 3 2.03 77.66 28.316 1 72.41 ? CAQ KFA 402 F 1 HETATM 9 C CAR KFA . . . C 3 3.123 78.532 28.319 1 70.54 ? CAR KFA 402 F 1 HETATM 10 C CAW KFA . . . C 3 2.899 79.916 28.347 1 72.5 ? CAW KFA 402 F 1 HETATM 11 C CAS KFA . . . C 3 4.417 77.995 28.292 1 67.38 ? CAS KFA 402 F 1 HETATM 12 C CAT KFA . . . C 3 4.615 76.601 28.255 1 72.34 ? CAT KFA 402 F 1 HETATM 13 C CAO KFA . . . C 3 3.518 75.696 28.273 1 86.42 ? CAO KFA 402 F 1 HETATM 14 C CAM KFA . . . C 3 3.725 74.34 28.179 1 96.65 ? CAM KFA 402 F 1 HETATM 15 S SAN KFA . . . C 3 5.227 73.654 27.597 1 110.29 ? SAN KFA 402 F 1 HETATM 16 C CAL KFA . . . C 3 2.885 73.279 28.372 1 94.52 ? CAL KFA 402 F 1 HETATM 17 N NAB KFA . . . C 3 1.619 70.731 28.628 1 122.36 ? NAB KFA 402 F 1 HETATM 18 C CAC KFA . . . C 3 0.934 69.46 28.937 1 114.41 ? CAC KFA 402 F 1 HETATM 19 P PAA KFA . . . C 3 -0.793 69.601 28.151 1 124.93 ? PAA KFA 402 F 1 HETATM 20 O OAE KFA . . . C 3 -0.532 69.586 26.496 1 108.38 ? OAE KFA 402 F 1 HETATM 21 O OAU KFA . . . C 3 -1.298 71.107 28.47 1 125.9 ? OAU KFA 402 F 1 HETATM 22 O OAD KFA . . . C 3 -1.734 68.57 28.686 1 108.87 ? OAD KFA 402 F 1 HETATM 23 C CAV KFA . . . C 3 0.972 69.188 30.474 1 110.59 ? CAV KFA 402 F 1 HETATM 24 C CAX KFA . . . C 3 2.334 69.224 30.95 1 116.03 ? CAX KFA 402 F 1 HETATM 25 C CAY KFA . . . C 3 2.954 70.437 31.344 1 111.57 ? CAY KFA 402 F 1 HETATM 26 C CAZ KFA . . . C 3 4.277 70.497 31.794 1 102.13 ? CAZ KFA 402 F 1 HETATM 27 C CBA KFA . . . C 3 5.011 69.319 31.854 1 103.39 ? CBA KFA 402 F 1 HETATM 28 C CBB KFA . . . C 3 4.414 68.105 31.481 1 107.42 ? CBB KFA 402 F 1 HETATM 29 C CBC KFA . . . C 3 3.088 68.046 31.028 1 108.58 ? CBC KFA 402 F 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 29 #