data_6N7Z # _model_server_result.job_id ywwW2ZMv5iL6xkBnY5NWJA _model_server_result.datetime_utc '2024-11-05 08:24:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n7z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6N7Z # _exptl.entry_id 6N7Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6N7Z _cell.length_a 110.862 _cell.length_b 110.862 _cell.length_c 75.038 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N7Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 110.862 110.862 37.519 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6N7Z _atom_sites.fract_transf_matrix[1][1] 0.00902 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00902 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013327 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL F 1 401 401 GOL GOL . C 3 KF7 F 1 402 501 KF7 3TM . D 4 CL F 1 403 1 CL CL . E 5 HOH F 1 501 47 HOH HOH . E 5 HOH F 2 502 8 HOH HOH . E 5 HOH F 3 503 35 HOH HOH . E 5 HOH F 4 504 51 HOH HOH . E 5 HOH F 5 505 74 HOH HOH . E 5 HOH F 6 506 21 HOH HOH . E 5 HOH F 7 507 14 HOH HOH . E 5 HOH F 8 508 45 HOH HOH . E 5 HOH F 9 509 54 HOH HOH . E 5 HOH F 10 510 1 HOH HOH . E 5 HOH F 11 511 49 HOH HOH . E 5 HOH F 12 512 39 HOH HOH . E 5 HOH F 13 513 63 HOH HOH . E 5 HOH F 14 514 60 HOH HOH . E 5 HOH F 15 515 40 HOH HOH . E 5 HOH F 16 516 29 HOH HOH . E 5 HOH F 17 517 31 HOH HOH . E 5 HOH F 18 518 32 HOH HOH . E 5 HOH F 19 519 44 HOH HOH . E 5 HOH F 20 520 18 HOH HOH . E 5 HOH F 21 521 55 HOH HOH . E 5 HOH F 22 522 48 HOH HOH . E 5 HOH F 23 523 69 HOH HOH . E 5 HOH F 24 524 65 HOH HOH . E 5 HOH F 25 525 4 HOH HOH . E 5 HOH F 26 526 27 HOH HOH . E 5 HOH F 27 527 11 HOH HOH . E 5 HOH F 28 528 61 HOH HOH . E 5 HOH F 29 529 50 HOH HOH . E 5 HOH F 30 530 22 HOH HOH . E 5 HOH F 31 531 26 HOH HOH . E 5 HOH F 32 532 25 HOH HOH . E 5 HOH F 33 533 57 HOH HOH . E 5 HOH F 34 534 37 HOH HOH . E 5 HOH F 35 535 9 HOH HOH . E 5 HOH F 36 536 72 HOH HOH . E 5 HOH F 37 537 7 HOH HOH . E 5 HOH F 38 538 73 HOH HOH . E 5 HOH F 39 539 52 HOH HOH . E 5 HOH F 40 540 16 HOH HOH . E 5 HOH F 41 541 12 HOH HOH . E 5 HOH F 42 542 62 HOH HOH . E 5 HOH F 43 543 38 HOH HOH . E 5 HOH F 44 544 6 HOH HOH . E 5 HOH F 45 545 20 HOH HOH . E 5 HOH F 46 546 28 HOH HOH . E 5 HOH F 47 547 3 HOH HOH . E 5 HOH F 48 548 19 HOH HOH . E 5 HOH F 49 549 5 HOH HOH . E 5 HOH F 50 550 42 HOH HOH . E 5 HOH F 51 551 23 HOH HOH . E 5 HOH F 52 552 33 HOH HOH . E 5 HOH F 53 553 24 HOH HOH . E 5 HOH F 54 554 59 HOH HOH . E 5 HOH F 55 555 66 HOH HOH . E 5 HOH F 56 556 13 HOH HOH . E 5 HOH F 57 557 15 HOH HOH . E 5 HOH F 58 558 58 HOH HOH . E 5 HOH F 59 559 30 HOH HOH . E 5 HOH F 60 560 17 HOH HOH . E 5 HOH F 61 561 2 HOH HOH . E 5 HOH F 62 562 70 HOH HOH . E 5 HOH F 63 563 10 HOH HOH . E 5 HOH F 64 564 64 HOH HOH . E 5 HOH F 65 565 34 HOH HOH . E 5 HOH F 66 566 53 HOH HOH . E 5 HOH F 67 567 68 HOH HOH . E 5 HOH F 68 568 56 HOH HOH . E 5 HOH F 69 569 71 HOH HOH . E 5 HOH F 70 570 67 HOH HOH . E 5 HOH F 71 571 36 HOH HOH . E 5 HOH F 72 572 43 HOH HOH . E 5 HOH F 73 573 41 HOH HOH . E 5 HOH F 74 574 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 11.937 96.964 11.01 1 73.73 ? C1 GOL 401 F 1 HETATM 2 O O1 GOL . . . B 2 13.271 96.956 10.48 1 71.54 ? O1 GOL 401 F 1 HETATM 3 C C2 GOL . . . B 2 11.392 98.383 11.16 1 76.27 ? C2 GOL 401 F 1 HETATM 4 O O2 GOL . . . B 2 12.195 99.28 10.374 1 77.85 ? O2 GOL 401 F 1 HETATM 5 C C3 GOL . . . B 2 11.344 98.842 12.631 1 79.28 ? C3 GOL 401 F 1 HETATM 6 O O3 GOL . . . B 2 10.088 98.524 13.272 1 83.55 ? O3 GOL 401 F 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #