data_6N7Z # _model_server_result.job_id 1IyegmbE2wQa34J9fBBc6Q _model_server_result.datetime_utc '2024-11-05 08:38:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n7z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 6N7Z # _exptl.entry_id 6N7Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 425.441 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(1S)-1-{[6-(4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}-2-phenylethyl]phosphonic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6N7Z _cell.length_a 110.862 _cell.length_b 110.862 _cell.length_c 75.038 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N7Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 110.862 110.862 37.519 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H20 N3 O3 P S' _chem_comp.formula_weight 425.441 _chem_comp.id KF7 _chem_comp.mon_nstd_flag . _chem_comp.name '[(1S)-1-{[6-(4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}-2-phenylethyl]phosphonic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAE PAA KF7 doub 186 n n OAU PAA KF7 sing 187 n n PAA OAD KF7 sing 188 n n PAA CAC KF7 sing 189 n n CAC NAB KF7 sing 190 n n CAC CAV KF7 sing 191 n n NAB C4 KF7 sing 192 n n CAV CAX KF7 sing 193 n n C4 N3 KF7 doub 194 n y C4 C5 KF7 sing 195 n y N3 C2 KF7 sing 196 n y C5 CAL KF7 sing 197 n y C5 C6 KF7 doub 198 n y C2 N1 KF7 doub 199 n y CAL CAM KF7 doub 200 n y CAT CAS KF7 doub 201 n y CAT CAO KF7 sing 202 n y C6 N1 KF7 sing 203 n y C6 SAN KF7 sing 204 n y CAS CAR KF7 sing 205 n y CAM CAO KF7 sing 206 n n CAM SAN KF7 sing 207 n y CAO CAP KF7 doub 208 n y CAR CAW KF7 sing 209 n n CAR CAQ KF7 doub 210 n y CAX CBC KF7 doub 211 n y CAX CAY KF7 sing 212 n y CAP CAQ KF7 sing 213 n y CBC CBB KF7 sing 214 n y CAY CAZ KF7 doub 215 n y CBB CBA KF7 doub 216 n y CAZ CBA KF7 sing 217 n y OAD H1 KF7 sing 218 n n CAL H2 KF7 sing 219 n n NAB H3 KF7 sing 220 n n CAP H4 KF7 sing 221 n n CAQ H5 KF7 sing 222 n n CAW H6 KF7 sing 223 n n CAW H7 KF7 sing 224 n n CAW H8 KF7 sing 225 n n CAS H9 KF7 sing 226 n n CAT H10 KF7 sing 227 n n C2 H11 KF7 sing 228 n n CAC H12 KF7 sing 229 n n OAU H13 KF7 sing 230 n n CAV H14 KF7 sing 231 n n CAV H15 KF7 sing 232 n n CAY H16 KF7 sing 233 n n CAZ H17 KF7 sing 234 n n CBA H18 KF7 sing 235 n n CBB H19 KF7 sing 236 n n CBC H20 KF7 sing 237 n n # _atom_sites.entry_id 6N7Z _atom_sites.fract_transf_matrix[1][1] 0.00902 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00902 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013327 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL F 1 401 401 GOL GOL . C 3 KF7 F 1 402 501 KF7 3TM . D 4 CL F 1 403 1 CL CL . E 5 HOH F 1 501 47 HOH HOH . E 5 HOH F 2 502 8 HOH HOH . E 5 HOH F 3 503 35 HOH HOH . E 5 HOH F 4 504 51 HOH HOH . E 5 HOH F 5 505 74 HOH HOH . E 5 HOH F 6 506 21 HOH HOH . E 5 HOH F 7 507 14 HOH HOH . E 5 HOH F 8 508 45 HOH HOH . E 5 HOH F 9 509 54 HOH HOH . E 5 HOH F 10 510 1 HOH HOH . E 5 HOH F 11 511 49 HOH HOH . E 5 HOH F 12 512 39 HOH HOH . E 5 HOH F 13 513 63 HOH HOH . E 5 HOH F 14 514 60 HOH HOH . E 5 HOH F 15 515 40 HOH HOH . E 5 HOH F 16 516 29 HOH HOH . E 5 HOH F 17 517 31 HOH HOH . E 5 HOH F 18 518 32 HOH HOH . E 5 HOH F 19 519 44 HOH HOH . E 5 HOH F 20 520 18 HOH HOH . E 5 HOH F 21 521 55 HOH HOH . E 5 HOH F 22 522 48 HOH HOH . E 5 HOH F 23 523 69 HOH HOH . E 5 HOH F 24 524 65 HOH HOH . E 5 HOH F 25 525 4 HOH HOH . E 5 HOH F 26 526 27 HOH HOH . E 5 HOH F 27 527 11 HOH HOH . E 5 HOH F 28 528 61 HOH HOH . E 5 HOH F 29 529 50 HOH HOH . E 5 HOH F 30 530 22 HOH HOH . E 5 HOH F 31 531 26 HOH HOH . E 5 HOH F 32 532 25 HOH HOH . E 5 HOH F 33 533 57 HOH HOH . E 5 HOH F 34 534 37 HOH HOH . E 5 HOH F 35 535 9 HOH HOH . E 5 HOH F 36 536 72 HOH HOH . E 5 HOH F 37 537 7 HOH HOH . E 5 HOH F 38 538 73 HOH HOH . E 5 HOH F 39 539 52 HOH HOH . E 5 HOH F 40 540 16 HOH HOH . E 5 HOH F 41 541 12 HOH HOH . E 5 HOH F 42 542 62 HOH HOH . E 5 HOH F 43 543 38 HOH HOH . E 5 HOH F 44 544 6 HOH HOH . E 5 HOH F 45 545 20 HOH HOH . E 5 HOH F 46 546 28 HOH HOH . E 5 HOH F 47 547 3 HOH HOH . E 5 HOH F 48 548 19 HOH HOH . E 5 HOH F 49 549 5 HOH HOH . E 5 HOH F 50 550 42 HOH HOH . E 5 HOH F 51 551 23 HOH HOH . E 5 HOH F 52 552 33 HOH HOH . E 5 HOH F 53 553 24 HOH HOH . E 5 HOH F 54 554 59 HOH HOH . E 5 HOH F 55 555 66 HOH HOH . E 5 HOH F 56 556 13 HOH HOH . E 5 HOH F 57 557 15 HOH HOH . E 5 HOH F 58 558 58 HOH HOH . E 5 HOH F 59 559 30 HOH HOH . E 5 HOH F 60 560 17 HOH HOH . E 5 HOH F 61 561 2 HOH HOH . E 5 HOH F 62 562 70 HOH HOH . E 5 HOH F 63 563 10 HOH HOH . E 5 HOH F 64 564 64 HOH HOH . E 5 HOH F 65 565 34 HOH HOH . E 5 HOH F 66 566 53 HOH HOH . E 5 HOH F 67 567 68 HOH HOH . E 5 HOH F 68 568 56 HOH HOH . E 5 HOH F 69 569 71 HOH HOH . E 5 HOH F 70 570 67 HOH HOH . E 5 HOH F 71 571 36 HOH HOH . E 5 HOH F 72 572 43 HOH HOH . E 5 HOH F 73 573 41 HOH HOH . E 5 HOH F 74 574 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAD KF7 . . . C 3 8.647 73.1 24.328 1 136.89 ? OAD KF7 402 F 1 HETATM 2 C CAM KF7 . . . C 3 3.25 74.489 27.246 1 98.63 ? CAM KF7 402 F 1 HETATM 3 C CAO KF7 . . . C 3 3.149 75.85 27.356 1 83.55 ? CAO KF7 402 F 1 HETATM 4 C CAL KF7 . . . C 3 4.315 73.757 26.849 1 112.57 ? CAL KF7 402 F 1 HETATM 5 N NAB KF7 . . . C 3 6.243 71.793 26.116 1 127.14 ? NAB KF7 402 F 1 HETATM 6 C CAP KF7 . . . C 3 1.933 76.432 27.745 1 76.75 ? CAP KF7 402 F 1 HETATM 7 C CAQ KF7 . . . C 3 1.756 77.81 27.857 1 65.55 ? CAQ KF7 402 F 1 HETATM 8 C CAR KF7 . . . C 3 2.796 78.667 27.59 1 64.18 ? CAR KF7 402 F 1 HETATM 9 C CAW KF7 . . . C 3 2.592 80.044 27.698 1 65.22 ? CAW KF7 402 F 1 HETATM 10 C CAS KF7 . . . C 3 4.017 78.13 27.201 1 66.08 ? CAS KF7 402 F 1 HETATM 11 C CAT KF7 . . . C 3 4.195 76.744 27.072 1 73.52 ? CAT KF7 402 F 1 HETATM 12 S SAN KF7 . . . C 3 2.025 73.391 27.544 1 105.91 ? SAN KF7 402 F 1 HETATM 13 C C5 KF7 . . . C 3 4.124 72.393 26.81 1 116.12 ? C5 KF7 402 F 1 HETATM 14 C C6 KF7 . . . C 3 2.869 72.02 27.17 1 112.11 ? C6 KF7 402 F 1 HETATM 15 N N1 KF7 . . . C 3 2.479 70.729 27.192 1 111.93 ? N1 KF7 402 F 1 HETATM 16 C C2 KF7 . . . C 3 3.376 69.721 26.841 1 112.47 ? C2 KF7 402 F 1 HETATM 17 N N3 KF7 . . . C 3 4.664 70.103 26.474 1 114.53 ? N3 KF7 402 F 1 HETATM 18 C C4 KF7 . . . C 3 4.997 71.412 26.463 1 119.71 ? C4 KF7 402 F 1 HETATM 19 C CAC KF7 . . . C 3 7.212 70.906 25.436 1 128.96 ? CAC KF7 402 F 1 HETATM 20 P PAA KF7 . . . C 3 7.92 71.857 23.974 1 125.39 ? PAA KF7 402 F 1 HETATM 21 O OAE KF7 . . . C 3 6.669 72.239 23.029 1 129.32 ? OAE KF7 402 F 1 HETATM 22 O OAU KF7 . . . C 3 8.805 70.808 23.133 1 125.74 ? OAU KF7 402 F 1 HETATM 23 C CAV KF7 . . . C 3 8.334 70.489 26.413 1 128.12 ? CAV KF7 402 F 1 HETATM 24 C CAX KF7 . . . C 3 7.807 70.285 27.692 1 129.18 ? CAX KF7 402 F 1 HETATM 25 C CAY KF7 . . . C 3 7.734 71.346 28.598 1 129.41 ? CAY KF7 402 F 1 HETATM 26 C CAZ KF7 . . . C 3 7.194 71.148 29.868 1 126.85 ? CAZ KF7 402 F 1 HETATM 27 C CBA KF7 . . . C 3 6.725 69.891 30.24 1 122.45 ? CBA KF7 402 F 1 HETATM 28 C CBB KF7 . . . C 3 6.799 68.833 29.338 1 122.91 ? CBB KF7 402 F 1 HETATM 29 C CBC KF7 . . . C 3 7.335 69.026 28.066 1 126.71 ? CBC KF7 402 F 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 212 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 29 #