data_6N82 # _model_server_result.job_id ppXCvbCc2ca6M6673_oF1w _model_server_result.datetime_utc '2024-11-29 12:28:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n82 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 6N82 # _exptl.entry_id 6N82 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 477.876 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(1S)-1-{[6-(3-chloro-4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}-2-(3-fluorophenyl)ethyl]phosphonic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6N82 _cell.length_a 110.92 _cell.length_b 110.92 _cell.length_c 77.53 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N82 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 110.92 110.92 38.765 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C21 H18 Cl F N3 O3 P S' _chem_comp.formula_weight 477.876 _chem_comp.id YF7 _chem_comp.mon_nstd_flag . _chem_comp.name '[(1S)-1-{[6-(3-chloro-4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}-2-(3-fluorophenyl)ethyl]phosphonic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OBC PBB YF7 doub 425 n n OBD PBB YF7 sing 426 n n PBB OBE YF7 sing 427 n n PBB CAS YF7 sing 428 n n CAS NAR YF7 sing 429 n n CAS CAT YF7 sing 430 n n NAR C4 YF7 sing 431 n n C4 N3 YF7 doub 432 n y C4 C5 YF7 sing 433 n y CAT CAU YF7 sing 434 n n N3 C2 YF7 sing 435 n y CAM C5 YF7 sing 436 n y CAM CAI YF7 doub 437 n y C5 C6 YF7 doub 438 n y C2 N1 YF7 doub 439 n y CAD CAC YF7 doub 440 n y CAD CAE YF7 sing 441 n y CAI CAE YF7 sing 442 n n CAI SAJ YF7 sing 443 n y CAC CAB YF7 sing 444 n y CAE CAF YF7 doub 445 n y C6 N1 YF7 sing 446 n y C6 SAJ YF7 sing 447 n y CAB CAG YF7 sing 448 n n CAB CAA YF7 doub 449 n y CAF CAA YF7 sing 450 n y CAU CAV YF7 doub 451 n y CAU CAZ YF7 sing 452 n y CAA CLA YF7 sing 453 n n CAV CAW YF7 sing 454 n y CAZ CAY YF7 doub 455 n y CAW CAX YF7 doub 456 n y CAY CAX YF7 sing 457 n y CAY FBA YF7 sing 458 n n CAF H1 YF7 sing 459 n n CAG H2 YF7 sing 460 n n CAG H3 YF7 sing 461 n n CAG H4 YF7 sing 462 n n CAC H5 YF7 sing 463 n n CAD H6 YF7 sing 464 n n CAM H7 YF7 sing 465 n n C2 H8 YF7 sing 466 n n NAR H9 YF7 sing 467 n n CAS H10 YF7 sing 468 n n OBD H11 YF7 sing 469 n n OBE H12 YF7 sing 470 n n CAT H13 YF7 sing 471 n n CAT H14 YF7 sing 472 n n CAZ H15 YF7 sing 473 n n CAX H16 YF7 sing 474 n n CAW H17 YF7 sing 475 n n CAV H18 YF7 sing 476 n n # _atom_sites.entry_id 6N82 _atom_sites.fract_transf_matrix[1][1] 0.009016 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009016 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012898 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL F 1 401 401 GOL GOL . C 3 YF7 F 1 402 501 YF7 YF7 . D 3 YF7 F 1 403 601 YF7 YF7 . E 4 PGE F 1 404 701 PGE PGE . F 5 EDO F 1 405 801 EDO EDO . G 6 CL F 1 406 1 CL CL . H 6 CL F 1 407 2 CL CL . I 7 PO4 F 1 408 1 PO4 PO4 . J 8 HOH F 1 501 13 HOH HOH . J 8 HOH F 2 502 72 HOH HOH . J 8 HOH F 3 503 87 HOH HOH . J 8 HOH F 4 504 70 HOH HOH . J 8 HOH F 5 505 62 HOH HOH . J 8 HOH F 6 506 20 HOH HOH . J 8 HOH F 7 507 53 HOH HOH . J 8 HOH F 8 508 90 HOH HOH . J 8 HOH F 9 509 58 HOH HOH . J 8 HOH F 10 510 116 HOH HOH . J 8 HOH F 11 511 78 HOH HOH . J 8 HOH F 12 512 29 HOH HOH . J 8 HOH F 13 513 49 HOH HOH . J 8 HOH F 14 514 2 HOH HOH . J 8 HOH F 15 515 112 HOH HOH . J 8 HOH F 16 516 3 HOH HOH . J 8 HOH F 17 517 115 HOH HOH . J 8 HOH F 18 518 80 HOH HOH . J 8 HOH F 19 519 45 HOH HOH . J 8 HOH F 20 520 101 HOH HOH . J 8 HOH F 21 521 96 HOH HOH . J 8 HOH F 22 522 88 HOH HOH . J 8 HOH F 23 523 27 HOH HOH . J 8 HOH F 24 524 8 HOH HOH . J 8 HOH F 25 525 97 HOH HOH . J 8 HOH F 26 526 51 HOH HOH . J 8 HOH F 27 527 19 HOH HOH . J 8 HOH F 28 528 102 HOH HOH . J 8 HOH F 29 529 93 HOH HOH . J 8 HOH F 30 530 26 HOH HOH . J 8 HOH F 31 531 31 HOH HOH . J 8 HOH F 32 532 10 HOH HOH . J 8 HOH F 33 533 52 HOH HOH . J 8 HOH F 34 534 21 HOH HOH . J 8 HOH F 35 535 86 HOH HOH . J 8 HOH F 36 536 81 HOH HOH . J 8 HOH F 37 537 44 HOH HOH . J 8 HOH F 38 538 12 HOH HOH . J 8 HOH F 39 539 42 HOH HOH . J 8 HOH F 40 540 30 HOH HOH . J 8 HOH F 41 541 109 HOH HOH . J 8 HOH F 42 542 38 HOH HOH . J 8 HOH F 43 543 75 HOH HOH . J 8 HOH F 44 544 104 HOH HOH . J 8 HOH F 45 545 22 HOH HOH . J 8 HOH F 46 546 65 HOH HOH . J 8 HOH F 47 547 73 HOH HOH . J 8 HOH F 48 548 107 HOH HOH . J 8 HOH F 49 549 34 HOH HOH . J 8 HOH F 50 550 47 HOH HOH . J 8 HOH F 51 551 46 HOH HOH . J 8 HOH F 52 552 108 HOH HOH . J 8 HOH F 53 553 95 HOH HOH . J 8 HOH F 54 554 77 HOH HOH . J 8 HOH F 55 555 119 HOH HOH . J 8 HOH F 56 556 114 HOH HOH . J 8 HOH F 57 557 94 HOH HOH . J 8 HOH F 58 558 11 HOH HOH . J 8 HOH F 59 559 106 HOH HOH . J 8 HOH F 60 560 24 HOH HOH . J 8 HOH F 61 561 85 HOH HOH . J 8 HOH F 62 562 82 HOH HOH . J 8 HOH F 63 563 89 HOH HOH . J 8 HOH F 64 564 40 HOH HOH . J 8 HOH F 65 565 43 HOH HOH . J 8 HOH F 66 566 121 HOH HOH . J 8 HOH F 67 567 76 HOH HOH . J 8 HOH F 68 568 6 HOH HOH . J 8 HOH F 69 569 66 HOH HOH . J 8 HOH F 70 570 120 HOH HOH . J 8 HOH F 71 571 4 HOH HOH . J 8 HOH F 72 572 55 HOH HOH . J 8 HOH F 73 573 33 HOH HOH . J 8 HOH F 74 574 79 HOH HOH . J 8 HOH F 75 575 1 HOH HOH . J 8 HOH F 76 576 111 HOH HOH . J 8 HOH F 77 577 36 HOH HOH . J 8 HOH F 78 578 100 HOH HOH . J 8 HOH F 79 579 57 HOH HOH . J 8 HOH F 80 580 9 HOH HOH . J 8 HOH F 81 581 103 HOH HOH . J 8 HOH F 82 582 118 HOH HOH . J 8 HOH F 83 583 7 HOH HOH . J 8 HOH F 84 584 117 HOH HOH . J 8 HOH F 85 585 64 HOH HOH . J 8 HOH F 86 586 56 HOH HOH . J 8 HOH F 87 587 69 HOH HOH . J 8 HOH F 88 588 122 HOH HOH . J 8 HOH F 89 589 37 HOH HOH . J 8 HOH F 90 590 39 HOH HOH . J 8 HOH F 91 591 14 HOH HOH . J 8 HOH F 92 592 35 HOH HOH . J 8 HOH F 93 593 92 HOH HOH . J 8 HOH F 94 594 25 HOH HOH . J 8 HOH F 95 595 113 HOH HOH . J 8 HOH F 96 596 32 HOH HOH . J 8 HOH F 97 597 48 HOH HOH . J 8 HOH F 98 598 63 HOH HOH . J 8 HOH F 99 599 71 HOH HOH . J 8 HOH F 100 600 99 HOH HOH . J 8 HOH F 101 601 68 HOH HOH . J 8 HOH F 102 602 41 HOH HOH . J 8 HOH F 103 603 54 HOH HOH . J 8 HOH F 104 604 60 HOH HOH . J 8 HOH F 105 605 110 HOH HOH . J 8 HOH F 106 606 84 HOH HOH . J 8 HOH F 107 607 5 HOH HOH . J 8 HOH F 108 608 83 HOH HOH . J 8 HOH F 109 609 59 HOH HOH . J 8 HOH F 110 610 74 HOH HOH . J 8 HOH F 111 611 105 HOH HOH . J 8 HOH F 112 612 67 HOH HOH . J 8 HOH F 113 613 91 HOH HOH . J 8 HOH F 114 614 98 HOH HOH . J 8 HOH F 115 615 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAF YF7 . . . D 3 -7.467 71.646 37.004 1 118.63 ? CAF YF7 403 F 1 HETATM 2 C CAA YF7 . . . D 3 -7.764 72.957 36.654 1 113.61 ? CAA YF7 403 F 1 HETATM 3 CL CLA YF7 . . . D 3 -9.373 73.314 36.063 1 106.14 ? CLA YF7 403 F 1 HETATM 4 C CAB YF7 . . . D 3 -6.797 73.951 36.763 1 107.25 ? CAB YF7 403 F 1 HETATM 5 C CAG YF7 . . . D 3 -7.103 75.27 36.399 1 102.73 ? CAG YF7 403 F 1 HETATM 6 C CAC YF7 . . . D 3 -5.532 73.593 37.233 1 111.87 ? CAC YF7 403 F 1 HETATM 7 C CAD YF7 . . . D 3 -5.246 72.268 37.594 1 120.1 ? CAD YF7 403 F 1 HETATM 8 C CAE YF7 . . . D 3 -6.211 71.264 37.479 1 116.46 ? CAE YF7 403 F 1 HETATM 9 C CAI YF7 . . . D 3 -6.011 69.97 37.834 1 115.51 ? CAI YF7 403 F 1 HETATM 10 S SAJ YF7 . . . D 3 -7.312 68.804 38.098 1 97.92 ? SAJ YF7 403 F 1 HETATM 11 C CAM YF7 . . . D 3 -4.852 69.353 38.094 1 102.88 ? CAM YF7 403 F 1 HETATM 12 C C5 YF7 . . . D 3 -4.996 68.037 38.445 1 116.64 ? C5 YF7 403 F 1 HETATM 13 C C6 YF7 . . . D 3 -6.282 67.562 38.497 1 118.08 ? C6 YF7 403 F 1 HETATM 14 N N1 YF7 . . . D 3 -6.587 66.276 38.824 1 110.91 ? N1 YF7 403 F 1 HETATM 15 C C2 YF7 . . . D 3 -5.581 65.363 39.149 1 112.73 ? C2 YF7 403 F 1 HETATM 16 N N3 YF7 . . . D 3 -4.28 65.853 39.102 1 111.55 ? N3 YF7 403 F 1 HETATM 17 C C4 YF7 . . . D 3 -4.035 67.151 38.753 1 124.38 ? C4 YF7 403 F 1 HETATM 18 N NAR YF7 . . . D 3 -2.783 67.599 38.711 1 116.04 ? NAR YF7 403 F 1 HETATM 19 C CAS YF7 . . . D 3 -1.707 66.671 39.055 1 115.65 ? CAS YF7 403 F 1 HETATM 20 P PBB YF7 . . . D 3 -0.936 66.045 37.49 1 112.72 ? PBB YF7 403 F 1 HETATM 21 O OBD YF7 . . . D 3 0.096 65.023 38.221 1 112.08 ? OBD YF7 403 F 1 HETATM 22 O OBE YF7 . . . D 3 -0.068 67.263 36.768 1 121.59 ? OBE YF7 403 F 1 HETATM 23 O OBC YF7 . . . D 3 -1.937 65.435 36.536 1 119.26 ? OBC YF7 403 F 1 HETATM 24 C CAT YF7 . . . D 3 -0.703 67.375 39.962 1 114.23 ? CAT YF7 403 F 1 HETATM 25 C CAU YF7 . . . D 3 -1.176 67.328 41.269 1 110.69 ? CAU YF7 403 F 1 HETATM 26 C CAZ YF7 . . . D 3 -1.618 68.505 41.858 1 111.67 ? CAZ YF7 403 F 1 HETATM 27 C CAY YF7 . . . D 3 -2.086 68.457 43.159 1 117.14 ? CAY YF7 403 F 1 HETATM 28 F FBA YF7 . . . D 3 -2.486 69.522 43.681 1 116.56 ? FBA YF7 403 F 1 HETATM 29 C CAX YF7 . . . D 3 -2.126 67.249 43.86 1 122.64 ? CAX YF7 403 F 1 HETATM 30 C CAW YF7 . . . D 3 -1.679 66.068 43.261 1 118.18 ? CAW YF7 403 F 1 HETATM 31 C CAV YF7 . . . D 3 -1.201 66.111 41.963 1 109.93 ? CAV YF7 403 F 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 412 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 31 #