data_6N8E # _model_server_result.job_id 0RjSaNWJ7pZSP8hl4eAiCg _model_server_result.datetime_utc '2024-11-23 04:56:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n8e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1401}' # _entry.id 6N8E # _exptl.entry_id 6N8E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 358.348 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "4'-PHOSPHOPANTETHEINE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6N8E _cell.length_a 81.325 _cell.length_b 154.345 _cell.length_c 183.905 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N8E _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 1036 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 1016 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id P24 _struct_conn.ptnr2_label_comp_id PNS _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id PNS _struct_conn.ptnr2_auth_seq_id 1401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.612 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C11 H23 N2 O7 P S' _chem_comp.formula_weight 358.348 _chem_comp.id PNS _chem_comp.mon_nstd_flag . _chem_comp.name "4'-PHOSPHOPANTETHEINE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O23 P24 PNS sing 302 n n O23 HOP1 PNS sing 303 n n P24 O25 PNS sing 304 n n P24 O26 PNS doub 305 n n P24 O27 PNS sing 306 n n O25 HOP2 PNS sing 307 n n O27 C28 PNS sing 308 n n C28 C29 PNS sing 309 n n C28 H282 PNS sing 310 n n C28 H281 PNS sing 311 n n C29 C30 PNS sing 312 n n C29 C31 PNS sing 313 n n C29 C32 PNS sing 314 n n C30 H303 PNS sing 315 n n C30 H302 PNS sing 316 n n C30 H301 PNS sing 317 n n C31 H313 PNS sing 318 n n C31 H312 PNS sing 319 n n C31 H311 PNS sing 320 n n C32 O33 PNS sing 321 n n C32 C34 PNS sing 322 n n C32 H32 PNS sing 323 n n O33 H33 PNS sing 324 n n C34 O35 PNS doub 325 n n C34 N36 PNS sing 326 n n N36 C37 PNS sing 327 n n N36 H36 PNS sing 328 n n C37 C38 PNS sing 329 n n C37 H372 PNS sing 330 n n C37 H371 PNS sing 331 n n C38 C39 PNS sing 332 n n C38 H382 PNS sing 333 n n C38 H381 PNS sing 334 n n C39 O40 PNS doub 335 n n C39 N41 PNS sing 336 n n N41 C42 PNS sing 337 n n N41 H41 PNS sing 338 n n C42 C43 PNS sing 339 n n C42 H422 PNS sing 340 n n C42 H421 PNS sing 341 n n C43 S44 PNS sing 342 n n C43 H431 PNS sing 343 n n C43 H432 PNS sing 344 n n S44 H44 PNS sing 345 n n # _atom_sites.entry_id 6N8E _atom_sites.fract_transf_matrix[1][1] 0.012296 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006479 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005438 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PNS A 1 1401 1391 PNS PNS . C 3 KFG A 1 1402 1 KFG 2MP . D 4 KFJ A 1 1403 2 KFJ XBH . E 5 CL A 1 1404 3 CL CL . F 6 PO4 A 1 1405 5 PO4 PO4 . G 6 PO4 A 1 1406 6 PO4 PO4 . H 7 HOH A 1 1501 7 HOH HOH . H 7 HOH A 2 1502 22 HOH HOH . H 7 HOH A 3 1503 14 HOH HOH . H 7 HOH A 4 1504 9 HOH HOH . H 7 HOH A 5 1505 8 HOH HOH . H 7 HOH A 6 1506 26 HOH HOH . H 7 HOH A 7 1507 5 HOH HOH . H 7 HOH A 8 1508 16 HOH HOH . H 7 HOH A 9 1509 1 HOH HOH . H 7 HOH A 10 1510 27 HOH HOH . H 7 HOH A 11 1511 32 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O23 PNS . . . B 2 -30.904 -18.427 12.134 1 62.8 ? O23 PNS 1401 A 1 HETATM 2 P P24 PNS . . . B 2 -29.592 -18.952 11.604 1 60.83 ? P24 PNS 1401 A 1 HETATM 3 O O26 PNS . . . B 2 -29.817 -20.182 10.767 1 63.23 ? O26 PNS 1401 A 1 HETATM 4 O O27 PNS . . . B 2 -28.683 -19.314 12.907 1 63.1 ? O27 PNS 1401 A 1 HETATM 5 C C28 PNS . . . B 2 -27.51 -19.999 12.642 1 62.3 ? C28 PNS 1401 A 1 HETATM 6 C C29 PNS . . . B 2 -27.491 -21.267 13.474 1 59.17 ? C29 PNS 1401 A 1 HETATM 7 C C30 PNS . . . B 2 -27.843 -20.881 14.906 1 59.75 ? C30 PNS 1401 A 1 HETATM 8 C C31 PNS . . . B 2 -26.054 -21.782 13.444 1 57.61 ? C31 PNS 1401 A 1 HETATM 9 C C32 PNS . . . B 2 -28.538 -22.236 12.909 1 58.25 ? C32 PNS 1401 A 1 HETATM 10 O O33 PNS . . . B 2 -28.273 -22.534 11.57 1 55.74 ? O33 PNS 1401 A 1 HETATM 11 C C34 PNS . . . B 2 -28.523 -23.53 13.702 1 58.49 ? C34 PNS 1401 A 1 HETATM 12 O O35 PNS . . . B 2 -29.081 -23.596 14.744 1 58.02 ? O35 PNS 1401 A 1 HETATM 13 N N36 PNS . . . B 2 -27.785 -24.644 13.152 1 58.18 ? N36 PNS 1401 A 1 HETATM 14 C C37 PNS . . . B 2 -27.694 -25.89 13.87 1 63.02 ? C37 PNS 1401 A 1 HETATM 15 C C38 PNS . . . B 2 -28.32 -27.047 13.117 1 65.42 ? C38 PNS 1401 A 1 HETATM 16 C C39 PNS . . . B 2 -28.178 -28.255 14.03 1 68.8 ? C39 PNS 1401 A 1 HETATM 17 O O40 PNS . . . B 2 -27.463 -28.187 14.972 1 70.63 ? O40 PNS 1401 A 1 HETATM 18 N N41 PNS . . . B 2 -28.914 -29.467 13.759 1 71.48 ? N41 PNS 1401 A 1 HETATM 19 C C42 PNS . . . B 2 -28.778 -30.615 14.631 1 73.21 ? C42 PNS 1401 A 1 HETATM 20 C C43 PNS . . . B 2 -30.118 -30.937 15.263 1 74.86 ? C43 PNS 1401 A 1 HETATM 21 S S44 PNS . . . B 2 -29.994 -32.585 16.004 1 78.08 ? S44 PNS 1401 A 1 HETATM 22 H H282 PNS . . . B 2 -27.47 -20.226 11.7 1 74.76 ? H282 PNS 1401 A 1 HETATM 23 H H281 PNS . . . B 2 -26.748 -19.445 12.874 1 74.76 ? H281 PNS 1401 A 1 HETATM 24 H H303 PNS . . . B 2 -27.683 -21.636 15.493 1 71.7 ? H303 PNS 1401 A 1 HETATM 25 H H302 PNS . . . B 2 -28.778 -20.628 14.952 1 71.7 ? H302 PNS 1401 A 1 HETATM 26 H H301 PNS . . . B 2 -27.292 -20.133 15.184 1 71.7 ? H301 PNS 1401 A 1 HETATM 27 H H313 PNS . . . B 2 -25.49 -21.197 13.973 1 69.14 ? H313 PNS 1401 A 1 HETATM 28 H H312 PNS . . . B 2 -26.024 -22.679 13.811 1 69.14 ? H312 PNS 1401 A 1 HETATM 29 H H311 PNS . . . B 2 -25.735 -21.797 12.528 1 69.14 ? H311 PNS 1401 A 1 HETATM 30 H H32 PNS . . . B 2 -29.406 -21.808 12.976 1 69.9 ? H32 PNS 1401 A 1 HETATM 31 H H33 PNS . . . B 2 -27.471 -22.806 11.494 1 66.88 ? H33 PNS 1401 A 1 HETATM 32 H H36 PNS . . . B 2 -27.397 -24.563 12.389 1 69.81 ? H36 PNS 1401 A 1 HETATM 33 H H372 PNS . . . B 2 -28.149 -25.791 14.721 1 75.63 ? H372 PNS 1401 A 1 HETATM 34 H H371 PNS . . . B 2 -26.758 -26.091 14.025 1 75.63 ? H371 PNS 1401 A 1 HETATM 35 H H382 PNS . . . B 2 -27.853 -27.198 12.28 1 78.51 ? H382 PNS 1401 A 1 HETATM 36 H H381 PNS . . . B 2 -29.256 -26.867 12.937 1 78.51 ? H381 PNS 1401 A 1 HETATM 37 H H41 PNS . . . B 2 -29.436 -29.507 13.076 1 85.78 ? H41 PNS 1401 A 1 HETATM 38 H H422 PNS . . . B 2 -28.473 -31.378 14.115 1 87.86 ? H422 PNS 1401 A 1 HETATM 39 H H421 PNS . . . B 2 -28.132 -30.417 15.327 1 87.86 ? H421 PNS 1401 A 1 HETATM 40 H H431 PNS . . . B 2 -30.813 -30.93 14.586 1 89.84 ? H431 PNS 1401 A 1 HETATM 41 H H432 PNS . . . B 2 -30.327 -30.282 15.947 1 89.84 ? H432 PNS 1401 A 1 # _model_server_stats.io_time_ms 93 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 41 #