data_6N8E # _model_server_result.job_id 4sizOdF6ZNFhuWcZFo9nqA _model_server_result.datetime_utc '2024-11-23 05:23:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n8e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1403}' # _entry.id 6N8E # _exptl.entry_id 6N8E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 240.213 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-(4-nitrophenyl)-L-threonine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6N8E _cell.length_a 81.325 _cell.length_b 154.345 _cell.length_c 183.905 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N8E _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 1036 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 1016 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id P24 _struct_conn.ptnr2_label_comp_id PNS _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id PNS _struct_conn.ptnr2_auth_seq_id 1401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.612 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H12 N2 O5' _chem_comp.formula_weight 240.213 _chem_comp.id KFJ _chem_comp.mon_nstd_flag . _chem_comp.name 4-(4-nitrophenyl)-L-threonine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O05 C03 KFJ doub 186 n n C03 O04 KFJ sing 187 n n C03 C02 KFJ sing 188 n n O07 C06 KFJ sing 189 n n C06 C02 KFJ sing 190 n n C06 C08 KFJ sing 191 n n C02 N01 KFJ sing 192 n n C10 C11 KFJ doub 193 n y C10 C09 KFJ sing 194 n y C11 C12 KFJ sing 195 n y O14 N13 KFJ doub 196 n n C08 C09 KFJ sing 197 n n C09 C17 KFJ doub 198 n y C12 N13 KFJ sing 199 n n C12 C16 KFJ doub 200 n y N13 O15 KFJ sing 201 n n C17 C16 KFJ sing 202 n y C02 H021 KFJ sing 203 n n C06 H061 KFJ sing 204 n n C08 H081 KFJ sing 205 n n C08 H082 KFJ sing 206 n n C10 H101 KFJ sing 207 n n C11 H111 KFJ sing 208 n n C16 H161 KFJ sing 209 n n C17 H171 KFJ sing 210 n n N01 H1 KFJ sing 211 n n N01 H011 KFJ sing 212 n n O04 H2 KFJ sing 213 n n O07 H071 KFJ sing 214 n n # _atom_sites.entry_id 6N8E _atom_sites.fract_transf_matrix[1][1] 0.012296 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006479 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005438 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PNS A 1 1401 1391 PNS PNS . C 3 KFG A 1 1402 1 KFG 2MP . D 4 KFJ A 1 1403 2 KFJ XBH . E 5 CL A 1 1404 3 CL CL . F 6 PO4 A 1 1405 5 PO4 PO4 . G 6 PO4 A 1 1406 6 PO4 PO4 . H 7 HOH A 1 1501 7 HOH HOH . H 7 HOH A 2 1502 22 HOH HOH . H 7 HOH A 3 1503 14 HOH HOH . H 7 HOH A 4 1504 9 HOH HOH . H 7 HOH A 5 1505 8 HOH HOH . H 7 HOH A 6 1506 26 HOH HOH . H 7 HOH A 7 1507 5 HOH HOH . H 7 HOH A 8 1508 16 HOH HOH . H 7 HOH A 9 1509 1 HOH HOH . H 7 HOH A 10 1510 27 HOH HOH . H 7 HOH A 11 1511 32 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 KFJ . . . D 4 -30.883 1.911 57.832 1 98.34 ? C02 KFJ 1403 A 1 HETATM 2 C C03 KFJ . . . D 4 -31.526 1.503 56.511 1 98.11 ? C03 KFJ 1403 A 1 HETATM 3 C C06 KFJ . . . D 4 -29.388 2.11 57.647 1 98.02 ? C06 KFJ 1403 A 1 HETATM 4 C C08 KFJ . . . D 4 -28.764 2.29 59.035 1 97.58 ? C08 KFJ 1403 A 1 HETATM 5 C C09 KFJ . . . D 4 -27.532 3.189 59.137 1 97.56 ? C09 KFJ 1403 A 1 HETATM 6 C C10 KFJ . . . D 4 -27.426 4.384 58.455 1 97.38 ? C10 KFJ 1403 A 1 HETATM 7 C C11 KFJ . . . D 4 -26.297 5.166 58.594 1 97.18 ? C11 KFJ 1403 A 1 HETATM 8 C C12 KFJ . . . D 4 -25.265 4.757 59.413 1 97.29 ? C12 KFJ 1403 A 1 HETATM 9 C C16 KFJ . . . D 4 -25.366 3.568 60.101 1 96.48 ? C16 KFJ 1403 A 1 HETATM 10 C C17 KFJ . . . D 4 -26.503 2.796 59.964 1 97.14 ? C17 KFJ 1403 A 1 HETATM 11 N N01 KFJ . . . D 4 -31.099 0.862 58.795 1 98.45 ? N01 KFJ 1403 A 1 HETATM 12 N N13 KFJ . . . D 4 -24.072 5.565 59.547 1 97.85 ? N13 KFJ 1403 A 1 HETATM 13 O O04 KFJ . . . D 4 -32.528 0.741 56.511 1 97.5 ? O04 KFJ 1403 A 1 HETATM 14 O O05 KFJ . . . D 4 -31.055 1.927 55.425 1 97.86 ? O05 KFJ 1403 A 1 HETATM 15 O O07 KFJ . . . D 4 -28.865 0.988 56.992 1 98.42 ? O07 KFJ 1403 A 1 HETATM 16 O O14 KFJ . . . D 4 -23.915 6.502 58.858 1 97.73 ? O14 KFJ 1403 A 1 HETATM 17 O O15 KFJ . . . D 4 -23.257 5.268 60.335 1 98.02 ? O15 KFJ 1403 A 1 HETATM 18 H H021 KFJ . . . D 4 -31.266 2.715 58.129 1 118.01 ? H021 KFJ 1403 A 1 HETATM 19 H H061 KFJ . . . D 4 -29.199 2.868 57.126 1 117.62 ? H061 KFJ 1403 A 1 HETATM 20 H H081 KFJ . . . D 4 -28.522 1.439 59.35 1 117.1 ? H081 KFJ 1403 A 1 HETATM 21 H H082 KFJ . . . D 4 -29.424 2.647 59.599 1 117.1 ? H082 KFJ 1403 A 1 HETATM 22 H H101 KFJ . . . D 4 -28.117 4.663 57.9 1 116.85 ? H101 KFJ 1403 A 1 HETATM 23 H H111 KFJ . . . D 4 -26.232 5.971 58.134 1 116.61 ? H111 KFJ 1403 A 1 HETATM 24 H H161 KFJ . . . D 4 -24.674 3.287 60.653 1 115.77 ? H161 KFJ 1403 A 1 HETATM 25 H H171 KFJ . . . D 4 -26.575 2 60.437 1 116.57 ? H171 KFJ 1403 A 1 HETATM 26 H H1 KFJ . . . D 4 -31.218 1.212 59.581 1 118.14 ? H1 KFJ 1403 A 1 HETATM 27 H H011 KFJ . . . D 4 -31.811 0.45 58.554 1 118.14 ? H011 KFJ 1403 A 1 HETATM 28 H H071 KFJ . . . D 4 -28.217 0.693 57.422 1 118.11 ? H071 KFJ 1403 A 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #