data_6N9Q # _model_server_result.job_id pwFBMaFu82VfdVbVi18qVA _model_server_result.datetime_utc '2024-11-05 01:19:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6n9q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":301}' # _entry.id 6N9Q # _exptl.entry_id 6N9Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6N9Q _cell.length_a 108.02 _cell.length_b 108.02 _cell.length_c 222.14 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6N9Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression B,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,OA 1 1 A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,NA 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 108.02 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 117 P HIS 118 1_555 C CO CO . P CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc2 A ND1 HIS 119 P HIS 120 1_555 C CO CO . P CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc3 A OD2 ASP 121 P ASP 122 1_555 P FE FE . P FE 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc4 A NE2 HIS 122 P HIS 123 1_555 P FE FE . P FE 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc5 A NE2 HIS 197 P HIS 198 1_555 C CO CO . P CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc6 A OD2 ASP 219 P ASP 220 1_555 C CO CO . P CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc7 A OD2 ASP 219 P ASP 220 1_555 P FE FE . P FE 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc8 A NE2 HIS 265 P HIS 266 1_555 P FE FE . P FE 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc9 C CO CO . P CO 301 1_555 F O6 HL4 . P HL4 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? metalc ? metalc10 C CO CO . P CO 301 1_555 NA O HOH . P HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc11 F OAP HL4 . P HL4 304 1_555 P FE FE . P FE 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc12 P FE FE . P FE 314 1_555 NA O HOH . P HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc13 B NE2 HIS 117 D HIS 118 1_555 T CO CO . D CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc14 B ND1 HIS 119 D HIS 120 1_555 T CO CO . D CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc15 B OD2 ASP 121 D ASP 122 1_555 IA FE FE . D FE 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc16 B NE2 HIS 122 D HIS 123 1_555 IA FE FE . D FE 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc17 B NE2 HIS 197 D HIS 198 1_555 T CO CO . D CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc18 B OD2 ASP 219 D ASP 220 1_555 T CO CO . D CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc19 B OD2 ASP 219 D ASP 220 1_555 IA FE FE . D FE 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc20 B NE2 HIS 265 D HIS 266 1_555 IA FE FE . D FE 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc21 T CO CO . D CO 301 1_555 X O6 HL4 . D HL4 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc22 T CO CO . D CO 301 1_555 OA O HOH . D HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc23 X OAP HL4 . D HL4 305 1_555 IA FE FE . D FE 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc24 IA FE FE . D FE 316 1_555 OA O HOH . D HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6N9Q _atom_sites.fract_transf_matrix[1][1] 0.009258 _atom_sites.fract_transf_matrix[1][2] 0.005345 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01069 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004502 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO P 1 301 4 CO CO . D 3 SO4 P 1 302 2 SO4 SO4 . E 3 SO4 P 1 303 4 SO4 SO4 . F 4 HL4 P 1 304 1 HL4 DRG . G 5 EDO P 1 305 1 EDO EDO . H 5 EDO P 1 306 8 EDO EDO . I 5 EDO P 1 307 10 EDO EDO . J 5 EDO P 1 308 11 EDO EDO . K 5 EDO P 1 309 14 EDO EDO . L 5 EDO P 1 310 17 EDO EDO . M 5 EDO P 1 311 18 EDO EDO . N 6 1PE P 1 312 2 1PE 1PE . O 6 1PE P 1 313 5 1PE 1PE . P 7 FE P 1 314 1 FE FE . Q 8 ACT P 1 315 8 ACT ACT . R 9 PGE P 1 316 1 PGE PGE . S 9 PGE P 1 317 4 PGE PGE . T 2 CO D 1 301 4 CO CO . U 3 SO4 D 1 302 1 SO4 SO4 . V 3 SO4 D 1 303 3 SO4 SO4 . W 3 SO4 D 1 304 5 SO4 SO4 . X 4 HL4 D 1 305 2 HL4 DRG . Y 5 EDO D 1 306 2 EDO EDO . Z 5 EDO D 1 307 3 EDO EDO . AA 5 EDO D 1 308 4 EDO EDO . BA 5 EDO D 1 309 12 EDO EDO . CA 5 EDO D 1 310 13 EDO EDO . DA 5 EDO D 1 311 15 EDO EDO . EA 5 EDO D 1 312 16 EDO EDO . FA 5 EDO D 1 313 19 EDO EDO . GA 6 1PE D 1 314 1 1PE 1PE . HA 6 1PE D 1 315 3 1PE 1PE . IA 7 FE D 1 316 2 FE FE . JA 8 ACT D 1 317 3 ACT ACT . KA 8 ACT D 1 318 6 ACT ACT . LA 9 PGE D 1 319 2 PGE PGE . MA 9 PGE D 1 320 3 PGE PGE . NA 10 HOH P 1 401 2 HOH HOH . NA 10 HOH P 2 402 212 HOH HOH . NA 10 HOH P 3 403 42 HOH HOH . NA 10 HOH P 4 404 103 HOH HOH . NA 10 HOH P 5 405 90 HOH HOH . NA 10 HOH P 6 406 175 HOH HOH . NA 10 HOH P 7 407 109 HOH HOH . NA 10 HOH P 8 408 63 HOH HOH . NA 10 HOH P 9 409 20 HOH HOH . NA 10 HOH P 10 410 194 HOH HOH . NA 10 HOH P 11 411 32 HOH HOH . NA 10 HOH P 12 412 84 HOH HOH . NA 10 HOH P 13 413 169 HOH HOH . NA 10 HOH P 14 414 192 HOH HOH . NA 10 HOH P 15 415 53 HOH HOH . NA 10 HOH P 16 416 12 HOH HOH . NA 10 HOH P 17 417 40 HOH HOH . NA 10 HOH P 18 418 112 HOH HOH . NA 10 HOH P 19 419 118 HOH HOH . NA 10 HOH P 20 420 178 HOH HOH . NA 10 HOH P 21 421 41 HOH HOH . NA 10 HOH P 22 422 173 HOH HOH . NA 10 HOH P 23 423 31 HOH HOH . NA 10 HOH P 24 424 37 HOH HOH . NA 10 HOH P 25 425 15 HOH HOH . NA 10 HOH P 26 426 224 HOH HOH . NA 10 HOH P 27 427 69 HOH HOH . NA 10 HOH P 28 428 28 HOH HOH . NA 10 HOH P 29 429 64 HOH HOH . NA 10 HOH P 30 430 152 HOH HOH . NA 10 HOH P 31 431 19 HOH HOH . NA 10 HOH P 32 432 68 HOH HOH . NA 10 HOH P 33 433 14 HOH HOH . NA 10 HOH P 34 434 180 HOH HOH . NA 10 HOH P 35 435 67 HOH HOH . NA 10 HOH P 36 436 38 HOH HOH . NA 10 HOH P 37 437 125 HOH HOH . NA 10 HOH P 38 438 162 HOH HOH . NA 10 HOH P 39 439 27 HOH HOH . NA 10 HOH P 40 440 204 HOH HOH . NA 10 HOH P 41 441 9 HOH HOH . NA 10 HOH P 42 442 108 HOH HOH . NA 10 HOH P 43 443 51 HOH HOH . NA 10 HOH P 44 444 209 HOH HOH . NA 10 HOH P 45 445 205 HOH HOH . NA 10 HOH P 46 446 10 HOH HOH . NA 10 HOH P 47 447 116 HOH HOH . NA 10 HOH P 48 448 39 HOH HOH . NA 10 HOH P 49 449 24 HOH HOH . NA 10 HOH P 50 450 23 HOH HOH . NA 10 HOH P 51 451 46 HOH HOH . NA 10 HOH P 52 452 21 HOH HOH . NA 10 HOH P 53 453 115 HOH HOH . NA 10 HOH P 54 454 187 HOH HOH . NA 10 HOH P 55 455 164 HOH HOH . NA 10 HOH P 56 456 17 HOH HOH . NA 10 HOH P 57 457 66 HOH HOH . NA 10 HOH P 58 458 161 HOH HOH . NA 10 HOH P 59 459 97 HOH HOH . NA 10 HOH P 60 460 218 HOH HOH . NA 10 HOH P 61 461 217 HOH HOH . NA 10 HOH P 62 462 184 HOH HOH . NA 10 HOH P 63 463 148 HOH HOH . NA 10 HOH P 64 464 227 HOH HOH . NA 10 HOH P 65 465 120 HOH HOH . NA 10 HOH P 66 466 143 HOH HOH . NA 10 HOH P 67 467 202 HOH HOH . NA 10 HOH P 68 468 104 HOH HOH . NA 10 HOH P 69 469 54 HOH HOH . NA 10 HOH P 70 470 52 HOH HOH . NA 10 HOH P 71 471 65 HOH HOH . NA 10 HOH P 72 472 220 HOH HOH . NA 10 HOH P 73 473 228 HOH HOH . NA 10 HOH P 74 474 222 HOH HOH . NA 10 HOH P 75 475 102 HOH HOH . NA 10 HOH P 76 476 119 HOH HOH . NA 10 HOH P 77 477 126 HOH HOH . NA 10 HOH P 78 478 193 HOH HOH . NA 10 HOH P 79 479 127 HOH HOH . NA 10 HOH P 80 480 196 HOH HOH . NA 10 HOH P 81 481 106 HOH HOH . NA 10 HOH P 82 482 123 HOH HOH . NA 10 HOH P 83 483 219 HOH HOH . NA 10 HOH P 84 484 188 HOH HOH . NA 10 HOH P 85 485 167 HOH HOH . NA 10 HOH P 86 486 221 HOH HOH . NA 10 HOH P 87 487 105 HOH HOH . NA 10 HOH P 88 488 181 HOH HOH . OA 10 HOH D 1 401 200 HOH HOH . OA 10 HOH D 2 402 1 HOH HOH . OA 10 HOH D 3 403 80 HOH HOH . OA 10 HOH D 4 404 61 HOH HOH . OA 10 HOH D 5 405 56 HOH HOH . OA 10 HOH D 6 406 96 HOH HOH . OA 10 HOH D 7 407 34 HOH HOH . OA 10 HOH D 8 408 159 HOH HOH . OA 10 HOH D 9 409 210 HOH HOH . OA 10 HOH D 10 410 176 HOH HOH . OA 10 HOH D 11 411 35 HOH HOH . OA 10 HOH D 12 412 174 HOH HOH . OA 10 HOH D 13 413 8 HOH HOH . OA 10 HOH D 14 414 207 HOH HOH . OA 10 HOH D 15 415 73 HOH HOH . OA 10 HOH D 16 416 111 HOH HOH . OA 10 HOH D 17 417 206 HOH HOH . OA 10 HOH D 18 418 88 HOH HOH . OA 10 HOH D 19 419 33 HOH HOH . OA 10 HOH D 20 420 153 HOH HOH . OA 10 HOH D 21 421 186 HOH HOH . OA 10 HOH D 22 422 95 HOH HOH . OA 10 HOH D 23 423 150 HOH HOH . OA 10 HOH D 24 424 225 HOH HOH . OA 10 HOH D 25 425 16 HOH HOH . OA 10 HOH D 26 426 208 HOH HOH . OA 10 HOH D 27 427 62 HOH HOH . OA 10 HOH D 28 428 168 HOH HOH . OA 10 HOH D 29 429 22 HOH HOH . OA 10 HOH D 30 430 36 HOH HOH . OA 10 HOH D 31 431 43 HOH HOH . OA 10 HOH D 32 432 160 HOH HOH . OA 10 HOH D 33 433 93 HOH HOH . OA 10 HOH D 34 434 158 HOH HOH . OA 10 HOH D 35 435 47 HOH HOH . OA 10 HOH D 36 436 203 HOH HOH . OA 10 HOH D 37 437 165 HOH HOH . OA 10 HOH D 38 438 182 HOH HOH . OA 10 HOH D 39 439 71 HOH HOH . OA 10 HOH D 40 440 25 HOH HOH . OA 10 HOH D 41 441 30 HOH HOH . OA 10 HOH D 42 442 79 HOH HOH . OA 10 HOH D 43 443 198 HOH HOH . OA 10 HOH D 44 444 157 HOH HOH . OA 10 HOH D 45 445 223 HOH HOH . OA 10 HOH D 46 446 29 HOH HOH . OA 10 HOH D 47 447 170 HOH HOH . OA 10 HOH D 48 448 18 HOH HOH . OA 10 HOH D 49 449 78 HOH HOH . OA 10 HOH D 50 450 50 HOH HOH . OA 10 HOH D 51 451 189 HOH HOH . OA 10 HOH D 52 452 77 HOH HOH . OA 10 HOH D 53 453 172 HOH HOH . OA 10 HOH D 54 454 49 HOH HOH . OA 10 HOH D 55 455 101 HOH HOH . OA 10 HOH D 56 456 83 HOH HOH . OA 10 HOH D 57 457 183 HOH HOH . OA 10 HOH D 58 458 156 HOH HOH . OA 10 HOH D 59 459 82 HOH HOH . OA 10 HOH D 60 460 149 HOH HOH . OA 10 HOH D 61 461 151 HOH HOH . OA 10 HOH D 62 462 72 HOH HOH . OA 10 HOH D 63 463 211 HOH HOH . OA 10 HOH D 64 464 55 HOH HOH . OA 10 HOH D 65 465 11 HOH HOH . OA 10 HOH D 66 466 94 HOH HOH . OA 10 HOH D 67 467 154 HOH HOH . OA 10 HOH D 68 468 163 HOH HOH . OA 10 HOH D 69 469 215 HOH HOH . OA 10 HOH D 70 470 85 HOH HOH . OA 10 HOH D 71 471 48 HOH HOH . OA 10 HOH D 72 472 155 HOH HOH . OA 10 HOH D 73 473 124 HOH HOH . OA 10 HOH D 74 474 113 HOH HOH . OA 10 HOH D 75 475 75 HOH HOH . OA 10 HOH D 76 476 57 HOH HOH . OA 10 HOH D 77 477 74 HOH HOH . OA 10 HOH D 78 478 171 HOH HOH . OA 10 HOH D 79 479 141 HOH HOH . OA 10 HOH D 80 480 45 HOH HOH . OA 10 HOH D 81 481 197 HOH HOH . OA 10 HOH D 82 482 216 HOH HOH . OA 10 HOH D 83 483 199 HOH HOH . OA 10 HOH D 84 484 201 HOH HOH . OA 10 HOH D 85 485 107 HOH HOH . OA 10 HOH D 86 486 177 HOH HOH . OA 10 HOH D 87 487 226 HOH HOH . OA 10 HOH D 88 488 191 HOH HOH . OA 10 HOH D 89 489 58 HOH HOH . OA 10 HOH D 90 490 59 HOH HOH . OA 10 HOH D 91 491 147 HOH HOH . OA 10 HOH D 92 492 179 HOH HOH . OA 10 HOH D 93 493 98 HOH HOH . OA 10 HOH D 94 494 44 HOH HOH . OA 10 HOH D 95 495 185 HOH HOH . OA 10 HOH D 96 496 190 HOH HOH . OA 10 HOH D 97 497 213 HOH HOH . OA 10 HOH D 98 498 99 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id T _atom_site.label_entity_id 2 _atom_site.Cartn_x 56.937 _atom_site.Cartn_y 4.541 _atom_site.Cartn_z 24.931 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.51 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 301 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 34 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #