data_6NAD
#
_model_server_result.job_id            LoR8kUXZpeFa5YyAO6cQmQ 
_model_server_result.datetime_utc      '2024-11-14 18:01:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6nad 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":601}' 
#
_entry.id    6NAD 
#
_exptl.entry_id    6NAD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              628.008 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (S)-(4-chloro-2-methoxy-3-{[4-(trifluoromethyl)piperidin-1-yl]methyl}quinolin-6-yl)(1,2-dimethyl-1H-imidazol-5-yl)[2-(trifluoromethyl)pyridin-4-yl]methanol 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6NAD 
_cell.length_a            96.742 
_cell.length_b            96.742 
_cell.length_c            127.711 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6NAD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    'P 61' 
_symmetry.space_group_name_H-M     'P 61' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C 1 1 
B,D 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C29 H28 Cl F6 N5 O2' 
_chem_comp.formula_weight    628.008 
_chem_comp.id                KHY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (S)-(4-chloro-2-methoxy-3-{[4-(trifluoromethyl)piperidin-1-yl]methyl}quinolin-6-yl)(1,2-dimethyl-1H-imidazol-5-yl)[2-(trifluoromethyl)pyridin-4-yl]methanol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C01 O02 KHY sing 171 n n 
F42 C40 KHY sing 172 n n 
O02 C03 KHY sing 173 n n 
N04 C03 KHY doub 174 n y 
N04 C05 KHY sing 175 n y 
C06 C05 KHY sing 176 n y 
C06 C07 KHY doub 177 n y 
N37 C36 KHY doub 178 n y 
N37 C38 KHY sing 179 n y 
C36 C35 KHY sing 180 n y 
F41 C40 KHY sing 181 n n 
C03 C13 KHY sing 182 n y 
C40 C38 KHY sing 183 n n 
C40 F43 KHY sing 184 n n 
C05 C10 KHY doub 185 n y 
C07 C08 KHY sing 186 n y 
C38 C39 KHY doub 187 n y 
C35 C34 KHY doub 188 n y 
C20 C19 KHY sing 189 n n 
C20 N15 KHY sing 190 n n 
F23 C21 KHY sing 191 n n 
C39 C34 KHY sing 192 n y 
C19 C18 KHY sing 193 n n 
C34 C25 KHY sing 194 n n 
C13 C14 KHY sing 195 n n 
C13 C11 KHY doub 196 n y 
F24 C21 KHY sing 197 n n 
C10 C11 KHY sing 198 n y 
C10 C09 KHY sing 199 n y 
C08 C09 KHY doub 200 n y 
C08 C25 KHY sing 201 n n 
C21 C18 KHY sing 202 n n 
C21 F22 KHY sing 203 n n 
C14 N15 KHY sing 204 n n 
C11 CL12 KHY sing 205 n n 
N15 C16 KHY sing 206 n n 
C25 C27 KHY sing 207 n n 
C25 O26 KHY sing 208 n n 
C18 C17 KHY sing 209 n n 
C28 C27 KHY doub 210 n y 
C28 N29 KHY sing 211 n y 
C27 N32 KHY sing 212 n y 
C16 C17 KHY sing 213 n n 
N29 C30 KHY doub 214 n y 
N32 C30 KHY sing 215 n y 
N32 C33 KHY sing 216 n n 
C30 C31 KHY sing 217 n n 
C17 H171 KHY sing 218 n n 
C17 H172 KHY sing 219 n n 
C20 H202 KHY sing 220 n n 
C20 H201 KHY sing 221 n n 
C28 H281 KHY sing 222 n n 
C01 H011 KHY sing 223 n n 
C01 H013 KHY sing 224 n n 
C01 H012 KHY sing 225 n n 
C06 H061 KHY sing 226 n n 
C07 H071 KHY sing 227 n n 
C09 H091 KHY sing 228 n n 
C14 H142 KHY sing 229 n n 
C14 H141 KHY sing 230 n n 
C16 H162 KHY sing 231 n n 
C16 H161 KHY sing 232 n n 
C18 H181 KHY sing 233 n n 
C19 H191 KHY sing 234 n n 
C19 H192 KHY sing 235 n n 
C31 H313 KHY sing 236 n n 
C31 H311 KHY sing 237 n n 
C31 H312 KHY sing 238 n n 
C33 H331 KHY sing 239 n n 
C33 H332 KHY sing 240 n n 
C33 H333 KHY sing 241 n n 
C35 H351 KHY sing 242 n n 
C36 H361 KHY sing 243 n n 
C39 H391 KHY sing 244 n n 
O26 H261 KHY sing 245 n n 
#
_atom_sites.entry_id                     6NAD 
_atom_sites.fract_transf_matrix[1][1]    0.010337 
_atom_sites.fract_transf_matrix[1][2]    0.005968 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011936 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00783 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 KHY A 1 601 1 KHY LIG . 
D 2 KHY B 1 601 2 KHY LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 KHY . . . D 2 104.442 -30.055 28.157 1 80.43 ? C10 KHY 601 B 1 
HETATM 2 C C13 KHY . . . D 2 102.931 -32.026 28.163 1 87.51 ? C13 KHY 601 B 1 
HETATM 3 C C17 KHY . . . D 2 103.357 -36.503 26.462 1 111.21 ? C17 KHY 601 B 1 
HETATM 4 C C20 KHY . . . D 2 103.434 -34.813 28.619 1 104.94 ? C20 KHY 601 B 1 
HETATM 5 C C21 KHY . . . D 2 104.843 -38.047 27.596 1 115.26 ? C21 KHY 601 B 1 
HETATM 6 C C28 KHY . . . D 2 104.974 -25.614 27.097 1 94.77 ? C28 KHY 601 B 1 
HETATM 7 C C01 KHY . . . D 2 101.551 -32.344 31.536 1 89.21 ? C01 KHY 601 B 1 
HETATM 8 C C03 KHY . . . D 2 102.618 -31.716 29.49 1 80.76 ? C03 KHY 601 B 1 
HETATM 9 C C05 KHY . . . D 2 104.093 -29.803 29.46 1 79.57 ? C05 KHY 601 B 1 
HETATM 10 C C06 KHY . . . D 2 104.668 -28.664 30.174 1 82.42 ? C06 KHY 601 B 1 
HETATM 11 C C07 KHY . . . D 2 105.56 -27.843 29.538 1 81.91 ? C07 KHY 601 B 1 
HETATM 12 C C08 KHY . . . D 2 105.929 -28.095 28.172 1 78 ? C08 KHY 601 B 1 
HETATM 13 C C09 KHY . . . D 2 105.379 -29.194 27.49 1 78.75 ? C09 KHY 601 B 1 
HETATM 14 C C11 KHY . . . D 2 103.855 -31.196 27.463 1 87.52 ? C11 KHY 601 B 1 
HETATM 15 C C14 KHY . . . D 2 102.279 -33.257 27.497 1 96.36 ? C14 KHY 601 B 1 
HETATM 16 C C16 KHY . . . D 2 102.512 -35.225 26.584 1 105.9 ? C16 KHY 601 B 1 
HETATM 17 C C18 KHY . . . D 2 104.543 -36.578 27.238 1 114.91 ? C18 KHY 601 B 1 
HETATM 18 C C19 KHY . . . D 2 104.606 -35.763 28.428 1 112.43 ? C19 KHY 601 B 1 
HETATM 19 C C25 KHY . . . D 2 106.948 -27.17 27.477 1 88.14 ? C25 KHY 601 B 1 
HETATM 20 C C27 KHY . . . D 2 106.295 -25.939 26.971 1 93.73 ? C27 KHY 601 B 1 
HETATM 21 C C30 KHY . . . D 2 105.973 -24.015 26.009 1 87.97 ? C30 KHY 601 B 1 
HETATM 22 C C31 KHY . . . D 2 106.216 -22.7 25.245 1 79.14 ? C31 KHY 601 B 1 
HETATM 23 C C33 KHY . . . D 2 108.281 -24.82 25.91 1 99.53 ? C33 KHY 601 B 1 
HETATM 24 C C34 KHY . . . D 2 108.024 -26.841 28.505 1 84.84 ? C34 KHY 601 B 1 
HETATM 25 C C35 KHY . . . D 2 107.911 -25.709 29.323 1 91.58 ? C35 KHY 601 B 1 
HETATM 26 C C36 KHY . . . D 2 108.909 -25.457 30.244 1 91.9 ? C36 KHY 601 B 1 
HETATM 27 C C38 KHY . . . D 2 110.102 -27.359 29.583 1 88.66 ? C38 KHY 601 B 1 
HETATM 28 C C39 KHY . . . D 2 109.138 -27.677 28.638 1 77.96 ? C39 KHY 601 B 1 
HETATM 29 C C40 KHY . . . D 2 111.337 -28.248 29.762 1 103.08 ? C40 KHY 601 B 1 
HETATM 30 F F22 KHY . . . D 2 104.803 -38.776 26.503 1 110.62 ? F22 KHY 601 B 1 
HETATM 31 F F23 KHY . . . D 2 103.909 -38.522 28.49 1 121.66 ? F23 KHY 601 B 1 
HETATM 32 F F24 KHY . . . D 2 106.077 -38.143 28.15 1 109.77 ? F24 KHY 601 B 1 
HETATM 33 F F41 KHY . . . D 2 111.05 -29.531 29.371 1 90.19 ? F41 KHY 601 B 1 
HETATM 34 F F42 KHY . . . D 2 111.695 -28.234 31.053 1 110.26 ? F42 KHY 601 B 1 
HETATM 35 F F43 KHY . . . D 2 112.359 -27.753 28.999 1 115.42 ? F43 KHY 601 B 1 
HETATM 36 N N04 KHY . . . D 2 103.182 -30.63 30.136 1 77.48 ? N04 KHY 601 B 1 
HETATM 37 N N15 KHY . . . D 2 103.077 -34.205 27.398 1 99.87 ? N15 KHY 601 B 1 
HETATM 38 N N29 KHY . . . D 2 104.794 -24.43 26.502 1 94.65 ? N29 KHY 601 B 1 
HETATM 39 N N32 KHY . . . D 2 106.886 -24.919 26.286 1 97.87 ? N32 KHY 601 B 1 
HETATM 40 N N37 KHY . . . D 2 109.981 -26.269 30.366 1 89.16 ? N37 KHY 601 B 1 
HETATM 41 O O02 KHY . . . D 2 101.694 -32.556 30.165 1 79.88 ? O02 KHY 601 B 1 
HETATM 42 O O26 KHY . . . D 2 107.553 -27.861 26.392 1 89.31 ? O26 KHY 601 B 1 
HETATM 43 CL CL12 KHY . . . D 2 104.272 -31.551 25.81 1 91.19 ? CL12 KHY 601 B 1 
HETATM 44 H H171 KHY . . . D 2 102.766 -37.309 26.685 1 133.45 ? H171 KHY 601 B 1 
HETATM 45 H H172 KHY . . . D 2 103.637 -36.579 25.492 1 133.45 ? H172 KHY 601 B 1 
HETATM 46 H H202 KHY . . . D 2 103.669 -34.109 29.285 1 125.92 ? H202 KHY 601 B 1 
HETATM 47 H H201 KHY . . . D 2 102.628 -35.334 28.989 1 125.92 ? H201 KHY 601 B 1 
HETATM 48 H H281 KHY . . . D 2 104.274 -26.159 27.551 1 113.73 ? H281 KHY 601 B 1 
HETATM 49 H H011 KHY . . . D 2 100.684 -32.663 31.823 1 107.06 ? H011 KHY 601 B 1 
HETATM 50 H H013 KHY . . . D 2 101.628 -31.365 31.731 1 107.06 ? H013 KHY 601 B 1 
HETATM 51 H H012 KHY . . . D 2 102.255 -32.83 32.018 1 107.06 ? H012 KHY 601 B 1 
HETATM 52 H H061 KHY . . . D 2 104.413 -28.486 31.114 1 98.9 ? H061 KHY 601 B 1 
HETATM 53 H H071 KHY . . . D 2 105.941 -27.091 30.009 1 98.29 ? H071 KHY 601 B 1 
HETATM 54 H H091 KHY . . . D 2 105.643 -29.379 26.519 1 94.49 ? H091 KHY 601 B 1 
HETATM 55 H H142 KHY . . . D 2 101.979 -32.998 26.564 1 115.64 ? H142 KHY 601 B 1 
HETATM 56 H H141 KHY . . . D 2 101.492 -33.535 28.024 1 115.64 ? H141 KHY 601 B 1 
HETATM 57 H H162 KHY . . . D 2 102.374 -34.86 25.701 1 127.08 ? H162 KHY 601 B 1 
HETATM 58 H H161 KHY . . . D 2 101.623 -35.459 26.938 1 127.08 ? H161 KHY 601 B 1 
HETATM 59 H H181 KHY . . . D 2 105.281 -36.268 26.65 1 137.89 ? H181 KHY 601 B 1 
HETATM 60 H H191 KHY . . . D 2 104.655 -36.344 29.192 1 134.92 ? H191 KHY 601 B 1 
HETATM 61 H H192 KHY . . . D 2 105.43 -35.229 28.39 1 134.92 ? H192 KHY 601 B 1 
HETATM 62 H H313 KHY . . . D 2 105.357 -22.37 24.87 1 94.97 ? H313 KHY 601 B 1 
HETATM 63 H H311 KHY . . . D 2 106.861 -22.861 24.504 1 94.97 ? H311 KHY 601 B 1 
HETATM 64 H H312 KHY . . . D 2 106.588 -22.022 25.862 1 94.97 ? H312 KHY 601 B 1 
HETATM 65 H H331 KHY . . . D 2 108.804 -25.529 26.383 1 119.43 ? H331 KHY 601 B 1 
HETATM 66 H H332 KHY . . . D 2 108.638 -23.909 26.172 1 119.43 ? H332 KHY 601 B 1 
HETATM 67 H H333 KHY . . . D 2 108.372 -24.945 24.904 1 119.43 ? H333 KHY 601 B 1 
HETATM 68 H H351 KHY . . . D 2 107.144 -25.117 29.248 1 109.9 ? H351 KHY 601 B 1 
HETATM 69 H H361 KHY . . . D 2 108.838 -24.653 30.832 1 110.28 ? H361 KHY 601 B 1 
HETATM 70 H H391 KHY . . . D 2 109.237 -28.485 28.067 1 93.55 ? H391 KHY 601 B 1 
HETATM 71 H H261 KHY . . . D 2 106.997 -27.803 25.629 1 107.17 ? H261 KHY 601 B 1 
#
_model_server_stats.io_time_ms              77 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           335 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           71 
#