data_6NAO # _model_server_result.job_id HUPEylz5oCX1cy4et_4C1Q _model_server_result.datetime_utc '2025-03-30 18:33:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6nao # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 6NAO # _exptl.entry_id 6NAO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 380.397 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1R,2S)-2-[(7-hydroxy-5-phenylpyrazolo[1,5-a]pyrimidine-3-carbonyl)amino]cyclohexane-1-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.46 _cell.angle_gamma 90 _cell.entry_id 6NAO _cell.length_a 219.99 _cell.length_b 45.946 _cell.length_c 90.105 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NAO _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 230 A HIS 390 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc2 A SG CYS 236 A CYS 396 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc3 A SG CYS 237 A CYS 397 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc4 A SG CYS 244 A CYS 404 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc5 B NE2 HIS 230 B HIS 390 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc6 B SG CYS 236 B CYS 396 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? metalc ? metalc7 B SG CYS 237 B CYS 397 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc8 B SG CYS 244 B CYS 404 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? # _chem_comp.formula 'C20 H20 N4 O4' _chem_comp.formula_weight 380.397 _chem_comp.id KHM _chem_comp.mon_nstd_flag . _chem_comp.name '(1R,2S)-2-[(7-hydroxy-5-phenylpyrazolo[1,5-a]pyrimidine-3-carbonyl)amino]cyclohexane-1-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O24 C22 KHM doub 173 n n C22 C21 KHM sing 174 n n C22 O23 KHM sing 175 n n C21 C16 KHM sing 176 n n C21 C20 KHM sing 177 n n C16 C17 KHM sing 178 n n C16 N15 KHM sing 179 n n C18 C17 KHM sing 180 n n C18 C19 KHM sing 181 n n C20 C19 KHM sing 182 n n O25 C14 KHM doub 183 n n N15 C14 KHM sing 184 n n C14 C13 KHM sing 185 n n C13 C26 KHM sing 186 n y C13 C12 KHM doub 187 n y C26 N27 KHM doub 188 n y C12 N11 KHM sing 189 n y C12 N28 KHM sing 190 n y N11 C04 KHM doub 191 n y C07 C06 KHM doub 192 n y C07 C08 KHM sing 193 n y C06 C05 KHM sing 194 n y N27 N28 KHM sing 195 n y N28 C02 KHM sing 196 n y C04 C05 KHM sing 197 n n C04 C03 KHM sing 198 n y C05 C10 KHM doub 199 n y C08 C09 KHM doub 200 n y C02 C03 KHM doub 201 n y C02 O01 KHM sing 202 n n C10 C09 KHM sing 203 n y C10 H101 KHM sing 204 n n C17 H172 KHM sing 205 n n C17 H171 KHM sing 206 n n C20 H201 KHM sing 207 n n C20 H202 KHM sing 208 n n C21 H211 KHM sing 209 n n C26 H261 KHM sing 210 n n O01 H011 KHM sing 211 n n C03 H031 KHM sing 212 n n C06 H061 KHM sing 213 n n C07 H071 KHM sing 214 n n C08 H081 KHM sing 215 n n C09 H091 KHM sing 216 n n N15 H151 KHM sing 217 n n C16 H161 KHM sing 218 n n C18 H181 KHM sing 219 n n C18 H182 KHM sing 220 n n C19 H192 KHM sing 221 n n C19 H191 KHM sing 222 n n O23 H1 KHM sing 223 n n # _atom_sites.entry_id 6NAO _atom_sites.fract_transf_matrix[1][1] 0.004546 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001787 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021765 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011925 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 601 601 ZN ZN . D 3 KHM A 1 602 602 KHM 8ZP . E 2 ZN B 1 601 601 ZN ZN . F 3 KHM B 1 602 602 KHM 8ZP . G 4 HOH A 1 701 701 HOH HOH . G 4 HOH A 2 702 702 HOH HOH . G 4 HOH A 3 703 703 HOH HOH . G 4 HOH A 4 704 704 HOH HOH . G 4 HOH A 5 705 705 HOH HOH . G 4 HOH A 6 706 706 HOH HOH . G 4 HOH A 7 707 707 HOH HOH . G 4 HOH A 8 708 708 HOH HOH . G 4 HOH A 9 709 709 HOH HOH . G 4 HOH A 10 710 710 HOH HOH . G 4 HOH A 11 711 711 HOH HOH . G 4 HOH A 12 712 712 HOH HOH . G 4 HOH A 13 713 713 HOH HOH . H 4 HOH B 1 701 701 HOH HOH . H 4 HOH B 2 702 702 HOH HOH . H 4 HOH B 3 703 703 HOH HOH . H 4 HOH B 4 704 704 HOH HOH . H 4 HOH B 5 705 705 HOH HOH . H 4 HOH B 6 706 706 HOH HOH . H 4 HOH B 7 707 707 HOH HOH . H 4 HOH B 8 708 708 HOH HOH . H 4 HOH B 9 709 709 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 KHM . . . D 3 -28.836 20.69 -20.066 1 55.99 ? C10 KHM 602 A 1 HETATM 2 C C13 KHM . . . D 3 -29.473 15.551 -23.572 1 47.38 ? C13 KHM 602 A 1 HETATM 3 C C17 KHM . . . D 3 -32.121 18.598 -26.35 1 59.57 ? C17 KHM 602 A 1 HETATM 4 C C20 KHM . . . D 3 -29.452 19.965 -26.276 1 57.13 ? C20 KHM 602 A 1 HETATM 5 C C21 KHM . . . D 3 -29.717 18.737 -27.159 1 57.43 ? C21 KHM 602 A 1 HETATM 6 C C22 KHM . . . D 3 -28.414 17.971 -27.469 1 60.64 ? C22 KHM 602 A 1 HETATM 7 C C26 KHM . . . D 3 -29.316 14.275 -23.093 1 46.55 ? C26 KHM 602 A 1 HETATM 8 O O01 KHM . . . D 3 -28.538 15.446 -19.062 1 56.16 ? O01 KHM 602 A 1 HETATM 9 C C02 KHM . . . D 3 -28.811 16.245 -20.187 1 53.92 ? C02 KHM 602 A 1 HETATM 10 C C03 KHM . . . D 3 -28.868 17.617 -20.08 1 57.21 ? C03 KHM 602 A 1 HETATM 11 C C04 KHM . . . D 3 -29.121 18.404 -21.204 1 55.94 ? C04 KHM 602 A 1 HETATM 12 C C05 KHM . . . D 3 -29.235 19.939 -21.172 1 56.13 ? C05 KHM 602 A 1 HETATM 13 C C06 KHM . . . D 3 -29.781 20.608 -22.279 1 56.43 ? C06 KHM 602 A 1 HETATM 14 C C07 KHM . . . D 3 -29.925 21.995 -22.28 1 55.07 ? C07 KHM 602 A 1 HETATM 15 C C08 KHM . . . D 3 -29.546 22.729 -21.163 1 54.4 ? C08 KHM 602 A 1 HETATM 16 C C09 KHM . . . D 3 -29.009 22.077 -20.06 1 55.4 ? C09 KHM 602 A 1 HETATM 17 N N11 KHM . . . D 3 -29.354 17.784 -22.37 1 53.09 ? N11 KHM 602 A 1 HETATM 18 C C12 KHM . . . D 3 -29.308 16.406 -22.47 1 49.07 ? C12 KHM 602 A 1 HETATM 19 C C14 KHM . . . D 3 -29.869 15.97 -24.989 1 48.15 ? C14 KHM 602 A 1 HETATM 20 N N15 KHM . . . D 3 -30.363 17.323 -25.222 1 52.04 ? N15 KHM 602 A 1 HETATM 21 C C16 KHM . . . D 3 -30.792 17.828 -26.539 1 56.21 ? C16 KHM 602 A 1 HETATM 22 C C18 KHM . . . D 3 -32.052 20.143 -26.473 1 60.47 ? C18 KHM 602 A 1 HETATM 23 C C19 KHM . . . D 3 -30.726 20.802 -26.034 1 59.45 ? C19 KHM 602 A 1 HETATM 24 O O23 KHM . . . D 3 -27.411 18.109 -26.722 1 61.82 -1 O23 KHM 602 A 1 HETATM 25 O O24 KHM . . . D 3 -28.336 17.238 -28.502 1 61.31 ? O24 KHM 602 A 1 HETATM 26 O O25 KHM . . . D 3 -29.81 15.179 -25.87 1 47.07 ? O25 KHM 602 A 1 HETATM 27 N N28 KHM . . . D 3 -29.025 15.666 -21.391 1 47.88 ? N28 KHM 602 A 1 HETATM 28 N N27 KHM . . . D 3 -29.022 14.347 -21.736 1 45.45 ? N27 KHM 602 A 1 HETATM 29 H H101 KHM . . . D 3 -28.492 20.274 -19.311 1 56.05 ? H101 KHM 602 A 1 HETATM 30 H H172 KHM . . . D 3 -32.49 18.382 -25.477 1 59.62 ? H172 KHM 602 A 1 HETATM 31 H H171 KHM . . . D 3 -32.742 18.277 -27.024 1 59.73 ? H171 KHM 602 A 1 HETATM 32 H H201 KHM . . . D 3 -28.791 20.525 -26.711 1 56.75 ? H201 KHM 602 A 1 HETATM 33 H H202 KHM . . . D 3 -29.101 19.679 -25.417 1 56.78 ? H202 KHM 602 A 1 HETATM 34 H H211 KHM . . . D 3 -30.062 19.053 -28.009 1 57.37 ? H211 KHM 602 A 1 HETATM 35 H H261 KHM . . . D 3 -29.386 13.493 -23.593 1 46.61 ? H261 KHM 602 A 1 HETATM 36 H H011 KHM . . . D 3 -29.047 15.671 -18.416 1 56.25 ? H011 KHM 602 A 1 HETATM 37 H H031 KHM . . . D 3 -28.712 18.011 -19.253 1 58.04 ? H031 KHM 602 A 1 HETATM 38 H H061 KHM . . . D 3 -30.06 20.13 -23.025 1 56.35 ? H061 KHM 602 A 1 HETATM 39 H H071 KHM . . . D 3 -30.283 22.422 -23.023 1 54.55 ? H071 KHM 602 A 1 HETATM 40 H H081 KHM . . . D 3 -29.62 23.654 -21.164 1 54.19 ? H081 KHM 602 A 1 HETATM 41 H H091 KHM . . . D 3 -28.734 22.575 -19.323 1 55.5 ? H091 KHM 602 A 1 HETATM 42 H H151 KHM . . . D 3 -30.414 17.863 -24.562 1 51.96 ? H151 KHM 602 A 1 HETATM 43 H H161 KHM . . . D 3 -30.951 17.089 -27.143 1 56.04 ? H161 KHM 602 A 1 HETATM 44 H H181 KHM . . . D 3 -32.77 20.524 -25.942 1 60.44 ? H181 KHM 602 A 1 HETATM 45 H H182 KHM . . . D 3 -32.206 20.38 -27.401 1 60.73 ? H182 KHM 602 A 1 HETATM 46 H H192 KHM . . . D 3 -30.787 21.003 -25.086 1 59.57 ? H192 KHM 602 A 1 HETATM 47 H H191 KHM . . . D 3 -30.636 21.639 -26.519 1 59.33 ? H191 KHM 602 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 47 #