data_6NAS # _model_server_result.job_id DXbiQt20_C_AMvclkGK1HQ _model_server_result.datetime_utc '2024-11-16 04:40:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6nas # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":401}' # _entry.id 6NAS # _exptl.entry_id 6NAS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6NAS _cell.length_a 103.83 _cell.length_b 114.89 _cell.length_c 132.271 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NAS _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 9 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C KKD 1 A KKD 1 1_555 A N GLU 2 A GLU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale2 A C GLU 72 A GLU 72 1_555 A N HIC 73 A HIC 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C HIC 73 A HIC 73 1_555 A N GLY 74 A GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc1 D CA CA . A CA 400 1_555 E O3G ATP . A ATP 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc2 D CA CA . A CA 400 1_555 E O1B ATP . A ATP 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 472 n n O1 C6 MES sing 473 n n C2 C3 MES sing 474 n n C2 H21 MES sing 475 n n C2 H22 MES sing 476 n n C3 N4 MES sing 477 n n C3 H31 MES sing 478 n n C3 H32 MES sing 479 n n N4 C5 MES sing 480 n n N4 C7 MES sing 481 n n N4 HN4 MES sing 482 n n C5 C6 MES sing 483 n n C5 H51 MES sing 484 n n C5 H52 MES sing 485 n n C6 H61 MES sing 486 n n C6 H62 MES sing 487 n n C7 C8 MES sing 488 n n C7 H71 MES sing 489 n n C7 H72 MES sing 490 n n C8 S MES sing 491 n n C8 H81 MES sing 492 n n C8 H82 MES sing 493 n n S O1S MES doub 494 n n S O2S MES doub 495 n n S O3S MES sing 496 n n # _atom_sites.entry_id 6NAS _atom_sites.fract_transf_matrix[1][1] 0.009631 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008704 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00756 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA A 1 400 400 CA CA . E 5 ATP A 1 401 401 ATP ATP . F 6 LAB A 1 402 402 LAB LAB . G 7 GOL A 1 403 403 GOL GOL . H 7 GOL A 1 404 404 GOL GOL . I 8 ACO N 1 400 400 ACO ACO . J 9 MES N 1 401 401 MES MES . K 7 GOL N 1 402 402 GOL GOL . L 10 HOH A 1 501 501 HOH HOH . L 10 HOH A 2 502 502 HOH HOH . L 10 HOH A 3 503 503 HOH HOH . L 10 HOH A 4 504 504 HOH HOH . L 10 HOH A 5 505 505 HOH HOH . L 10 HOH A 6 506 506 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . J 9 -6.638 -28.24 57.625 1 61.57 ? O1 MES 401 N 1 HETATM 2 C C2 MES . . . J 9 -7.369 -27.125 57.143 1 53.58 ? C2 MES 401 N 1 HETATM 3 C C3 MES . . . J 9 -7.371 -26.006 58.178 1 43.31 ? C3 MES 401 N 1 HETATM 4 N N4 MES . . . J 9 -7.823 -26.519 59.466 1 40.25 ? N4 MES 401 N 1 HETATM 5 C C5 MES . . . J 9 -7.154 -27.722 59.928 1 40.99 ? C5 MES 401 N 1 HETATM 6 C C6 MES . . . J 9 -7.249 -28.751 58.806 1 39.62 ? C6 MES 401 N 1 HETATM 7 C C7 MES . . . J 9 -7.842 -25.459 60.482 1 45.56 ? C7 MES 401 N 1 HETATM 8 C C8 MES . . . J 9 -8.98 -25.699 61.472 1 43.61 ? C8 MES 401 N 1 HETATM 9 S S MES . . . J 9 -8.894 -24.556 62.687 1 74.55 ? S MES 401 N 1 HETATM 10 O O1S MES . . . J 9 -7.602 -24.695 63.4 1 57.39 ? O1S MES 401 N 1 HETATM 11 O O2S MES . . . J 9 -8.991 -23.199 62.097 1 54.83 ? O2S MES 401 N 1 HETATM 12 O O3S MES . . . J 9 -10.002 -24.743 63.652 1 43.09 ? O3S MES 401 N 1 HETATM 13 H H21 MES . . . J 9 -6.921 -26.766 56.215 1 64.3 ? H21 MES 401 N 1 HETATM 14 H H22 MES . . . J 9 -8.396 -27.426 56.926 1 64.3 ? H22 MES 401 N 1 HETATM 15 H H31 MES . . . J 9 -6.364 -25.595 58.279 1 51.98 ? H31 MES 401 N 1 HETATM 16 H H32 MES . . . J 9 -8.031 -25.2 57.85 1 51.98 ? H32 MES 401 N 1 HETATM 17 H HN4 MES . . . J 9 -8.771 -26.826 59.308 1 48.29 ? HN4 MES 401 N 1 HETATM 18 H H51 MES . . . J 9 -6.109 -27.511 60.163 1 49.19 ? H51 MES 401 N 1 HETATM 19 H H52 MES . . . J 9 -7.633 -28.101 60.833 1 49.19 ? H52 MES 401 N 1 HETATM 20 H H61 MES . . . J 9 -8.298 -28.984 58.607 1 47.55 ? H61 MES 401 N 1 HETATM 21 H H62 MES . . . J 9 -6.752 -29.674 59.109 1 47.55 ? H62 MES 401 N 1 HETATM 22 H H71 MES . . . J 9 -6.889 -25.442 61.014 1 54.67 ? H71 MES 401 N 1 HETATM 23 H H72 MES . . . J 9 -7.973 -24.488 59.998 1 54.67 ? H72 MES 401 N 1 HETATM 24 H H81 MES . . . J 9 -9.941 -25.627 60.959 1 52.33 ? H81 MES 401 N 1 HETATM 25 H H82 MES . . . J 9 -8.9 -26.702 61.896 1 52.33 ? H82 MES 401 N 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #