data_6NBF # _model_server_result.job_id JHeiGAaPk37Ev9xgri8qSg _model_server_result.datetime_utc '2024-11-24 06:08:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6nbf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":607}' # _entry.id 6NBF # _exptl.entry_id 6NBF _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 256.424 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6NBF _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NBF _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 M N N ? 8 N N N ? 8 O N N ? 8 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 R CYS 48 1_555 A SG CYS 91 R CYS 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 82 R CYS 108 1_555 A SG CYS 122 R CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 A SG CYS 105 R CYS 131 1_555 A SG CYS 144 R CYS 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 A SG CYS 255 R CYS 281 1_555 A SG CYS 325 R CYS 351 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 F SG CYS 22 N CYS 22 1_555 F SG CYS 96 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf6 F SG CYS 99 N CYS 99 1_555 F SG CYS 107 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 335 n n C1 O2 PLM doub 336 n n C1 C2 PLM sing 337 n n O1 H PLM sing 338 n n C2 C3 PLM sing 339 n n C2 H21 PLM sing 340 n n C2 H22 PLM sing 341 n n C3 C4 PLM sing 342 n n C3 H31 PLM sing 343 n n C3 H32 PLM sing 344 n n C4 C5 PLM sing 345 n n C4 H41 PLM sing 346 n n C4 H42 PLM sing 347 n n C5 C6 PLM sing 348 n n C5 H51 PLM sing 349 n n C5 H52 PLM sing 350 n n C6 C7 PLM sing 351 n n C6 H61 PLM sing 352 n n C6 H62 PLM sing 353 n n C7 C8 PLM sing 354 n n C7 H71 PLM sing 355 n n C7 H72 PLM sing 356 n n C8 C9 PLM sing 357 n n C8 H81 PLM sing 358 n n C8 H82 PLM sing 359 n n C9 CA PLM sing 360 n n C9 H91 PLM sing 361 n n C9 H92 PLM sing 362 n n CA CB PLM sing 363 n n CA HA1 PLM sing 364 n n CA HA2 PLM sing 365 n n CB CC PLM sing 366 n n CB HB1 PLM sing 367 n n CB HB2 PLM sing 368 n n CC CD PLM sing 369 n n CC HC1 PLM sing 370 n n CC HC2 PLM sing 371 n n CD CE PLM sing 372 n n CD HD1 PLM sing 373 n n CD HD2 PLM sing 374 n n CE CF PLM sing 375 n n CE HE1 PLM sing 376 n n CE HE2 PLM sing 377 n n CF CG PLM sing 378 n n CF HF1 PLM sing 379 n n CF HF2 PLM sing 380 n n CG HG1 PLM sing 381 n n CG HG2 PLM sing 382 n n CG HG3 PLM sing 383 n n # _atom_sites.entry_id 6NBF _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 7 CLR R 1 601 609 CLR CLR . H 7 CLR R 1 602 610 CLR CLR . I 7 CLR R 1 603 611 CLR CLR . J 7 CLR R 1 604 612 CLR CLR . K 7 CLR R 1 605 613 CLR CLR . L 7 CLR R 1 606 614 CLR CLR . M 8 PLM R 1 607 615 PLM PLM . N 8 PLM R 1 608 616 PLM PLM . O 8 PLM R 1 609 617 PLM PLM . P 8 PLM R 1 610 618 PLM PLM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . M 8 102.361 114.964 92.212 1 81.49 ? C1 PLM 607 R 1 HETATM 2 O O1 PLM . . . M 8 103.135 115.864 92.622 1 81.49 ? O1 PLM 607 R 1 HETATM 3 O O2 PLM . . . M 8 101.362 115.246 91.507 1 81.49 ? O2 PLM 607 R 1 HETATM 4 C C2 PLM . . . M 8 102.64 113.511 92.566 1 81.49 ? C2 PLM 607 R 1 HETATM 5 C C3 PLM . . . M 8 102.732 113.294 94.075 1 81.49 ? C3 PLM 607 R 1 HETATM 6 C C4 PLM . . . M 8 104.15 113.511 94.598 1 81.49 ? C4 PLM 607 R 1 HETATM 7 C C5 PLM . . . M 8 104.349 112.898 95.981 1 81.49 ? C5 PLM 607 R 1 HETATM 8 C C6 PLM . . . M 8 105.512 113.547 96.727 1 81.49 ? C6 PLM 607 R 1 HETATM 9 C C7 PLM . . . M 8 105.544 113.145 98.199 1 81.49 ? C7 PLM 607 R 1 HETATM 10 C C8 PLM . . . M 8 106.525 114.001 98.993 1 81.49 ? C8 PLM 607 R 1 HETATM 11 C C9 PLM . . . M 8 106.481 113.682 100.484 1 81.49 ? C9 PLM 607 R 1 HETATM 12 C CA PLM . . . M 8 107.46 114.549 101.269 1 81.49 ? CA PLM 607 R 1 HETATM 13 C CB PLM . . . M 8 107.329 114.34 102.774 1 81.49 ? CB PLM 607 R 1 HETATM 14 C CC PLM . . . M 8 108.009 115.458 103.556 1 81.49 ? CC PLM 607 R 1 HETATM 15 C CD PLM . . . M 8 108.895 114.92 104.675 1 81.49 ? CD PLM 607 R 1 HETATM 16 C CE PLM . . . M 8 109.691 116.034 105.347 1 81.49 ? CE PLM 607 R 1 HETATM 17 C CF PLM . . . M 8 110.454 115.525 106.566 1 81.49 ? CF PLM 607 R 1 HETATM 18 C CG PLM . . . M 8 111.76 116.279 106.761 1 81.49 ? CG PLM 607 R 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #