data_6NBR
#
_model_server_result.job_id            Tyg0YwOBSjla6wXU72KLNg 
_model_server_result.datetime_utc      '2025-01-12 02:39:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6nbr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":401}' 
#
_entry.id    6NBR 
#
_exptl.entry_id    6NBR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6NBR 
_cell.length_a            63.22 
_cell.length_b            63.239 
_cell.length_c            333.746 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6NBR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,G,I,K 1 1 
A,C,E,G,I,K 2 1 
B,D,F,H,J,L 3 1 
B,D,F,H,J,L 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 237 n n 
PA O2A NAP sing 238 n n 
PA O5B NAP sing 239 n n 
PA O3 NAP sing 240 n n 
O2A HOA2 NAP sing 241 n n 
O5B C5B NAP sing 242 n n 
C5B C4B NAP sing 243 n n 
C5B H51A NAP sing 244 n n 
C5B H52A NAP sing 245 n n 
C4B O4B NAP sing 246 n n 
C4B C3B NAP sing 247 n n 
C4B H4B NAP sing 248 n n 
O4B C1B NAP sing 249 n n 
C3B O3B NAP sing 250 n n 
C3B C2B NAP sing 251 n n 
C3B H3B NAP sing 252 n n 
O3B HO3A NAP sing 253 n n 
C2B O2B NAP sing 254 n n 
C2B C1B NAP sing 255 n n 
C2B H2B NAP sing 256 n n 
O2B P2B NAP sing 257 n n 
C1B N9A NAP sing 258 n n 
C1B H1B NAP sing 259 n n 
N9A C8A NAP sing 260 n y 
N9A C4A NAP sing 261 n y 
C8A N7A NAP doub 262 n y 
C8A H8A NAP sing 263 n n 
N7A C5A NAP sing 264 n y 
C5A C6A NAP sing 265 n y 
C5A C4A NAP doub 266 n y 
C6A N6A NAP sing 267 n n 
C6A N1A NAP doub 268 n y 
N6A H61A NAP sing 269 n n 
N6A H62A NAP sing 270 n n 
N1A C2A NAP sing 271 n y 
C2A N3A NAP doub 272 n y 
C2A H2A NAP sing 273 n n 
N3A C4A NAP sing 274 n y 
O3 PN NAP sing 275 n n 
PN O1N NAP doub 276 n n 
PN O2N NAP sing 277 n n 
PN O5D NAP sing 278 n n 
O5D C5D NAP sing 279 n n 
C5D C4D NAP sing 280 n n 
C5D H51N NAP sing 281 n n 
C5D H52N NAP sing 282 n n 
C4D O4D NAP sing 283 n n 
C4D C3D NAP sing 284 n n 
C4D H4D NAP sing 285 n n 
O4D C1D NAP sing 286 n n 
C3D O3D NAP sing 287 n n 
C3D C2D NAP sing 288 n n 
C3D H3D NAP sing 289 n n 
O3D HO3N NAP sing 290 n n 
C2D O2D NAP sing 291 n n 
C2D C1D NAP sing 292 n n 
C2D H2D NAP sing 293 n n 
O2D HO2N NAP sing 294 n n 
C1D N1N NAP sing 295 n n 
C1D H1D NAP sing 296 n n 
N1N C2N NAP sing 297 n y 
N1N C6N NAP doub 298 n y 
C2N C3N NAP doub 299 n y 
C2N H2N NAP sing 300 n n 
C3N C7N NAP sing 301 n n 
C3N C4N NAP sing 302 n y 
C7N O7N NAP doub 303 n n 
C7N N7N NAP sing 304 n n 
N7N H71N NAP sing 305 n n 
N7N H72N NAP sing 306 n n 
C4N C5N NAP doub 307 n y 
C4N H4N NAP sing 308 n n 
C5N C6N NAP sing 309 n y 
C5N H5N NAP sing 310 n n 
C6N H6N NAP sing 311 n n 
P2B O1X NAP doub 312 n n 
P2B O2X NAP sing 313 n n 
P2B O3X NAP sing 314 n n 
O2X HOP2 NAP sing 315 n n 
O3X HOP3 NAP sing 316 n n 
#
_atom_sites.entry_id                     6NBR 
_atom_sites.fract_transf_matrix[1][1]    0.015818 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015813 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002996 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NAP A 1 401 401 NAP NAP . 
F 2 NAP B 1 401 401 NAP NAP . 
G 2 NAP C 1 401 401 NAP NAP . 
H 2 NAP D 1 401 401 NAP NAP . 
I 3 HOH A 1 501 13 HOH HOH . 
I 3 HOH A 2 502 1 HOH HOH . 
I 3 HOH A 3 503 2 HOH HOH . 
I 3 HOH A 4 504 40 HOH HOH . 
I 3 HOH A 5 505 14 HOH HOH . 
I 3 HOH A 6 506 46 HOH HOH . 
I 3 HOH A 7 507 12 HOH HOH . 
I 3 HOH A 8 508 18 HOH HOH . 
I 3 HOH A 9 509 3 HOH HOH . 
I 3 HOH A 10 510 22 HOH HOH . 
I 3 HOH A 11 511 41 HOH HOH . 
I 3 HOH A 12 512 9 HOH HOH . 
J 3 HOH B 1 501 36 HOH HOH . 
J 3 HOH B 2 502 42 HOH HOH . 
J 3 HOH B 3 503 20 HOH HOH . 
J 3 HOH B 4 504 47 HOH HOH . 
J 3 HOH B 5 505 17 HOH HOH . 
J 3 HOH B 6 506 35 HOH HOH . 
J 3 HOH B 7 507 43 HOH HOH . 
J 3 HOH B 8 508 16 HOH HOH . 
J 3 HOH B 9 509 15 HOH HOH . 
K 3 HOH C 1 501 5 HOH HOH . 
K 3 HOH C 2 502 6 HOH HOH . 
K 3 HOH C 3 503 32 HOH HOH . 
K 3 HOH C 4 504 31 HOH HOH . 
K 3 HOH C 5 505 30 HOH HOH . 
K 3 HOH C 6 506 34 HOH HOH . 
K 3 HOH C 7 507 19 HOH HOH . 
K 3 HOH C 8 508 21 HOH HOH . 
K 3 HOH C 9 509 39 HOH HOH . 
K 3 HOH C 10 510 7 HOH HOH . 
K 3 HOH C 11 511 44 HOH HOH . 
K 3 HOH C 12 512 49 HOH HOH . 
K 3 HOH C 13 513 48 HOH HOH . 
K 3 HOH C 14 514 33 HOH HOH . 
L 3 HOH D 1 501 29 HOH HOH . 
L 3 HOH D 2 502 11 HOH HOH . 
L 3 HOH D 3 503 37 HOH HOH . 
L 3 HOH D 4 504 50 HOH HOH . 
L 3 HOH D 5 505 25 HOH HOH . 
L 3 HOH D 6 506 24 HOH HOH . 
L 3 HOH D 7 507 38 HOH HOH . 
L 3 HOH D 8 508 27 HOH HOH . 
L 3 HOH D 9 509 23 HOH HOH . 
L 3 HOH D 10 510 45 HOH HOH . 
L 3 HOH D 11 511 28 HOH HOH . 
L 3 HOH D 12 512 8 HOH HOH . 
L 3 HOH D 13 513 10 HOH HOH . 
L 3 HOH D 14 514 26 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . H 2 46.52 -17.13 13.266 1 33.64 ? PA NAP 401 D 1 
HETATM 2 O O1A NAP . . . H 2 47.934 -17.551 12.92 1 46.32 ? O1A NAP 401 D 1 
HETATM 3 O O2A NAP . . . H 2 45.513 -18.064 12.634 1 38.94 ? O2A NAP 401 D 1 
HETATM 4 O O5B NAP . . . H 2 46.259 -15.559 12.804 1 39.36 ? O5B NAP 401 D 1 
HETATM 5 C C5B NAP . . . H 2 47.35 -14.682 12.989 1 46.25 ? C5B NAP 401 D 1 
HETATM 6 C C4B NAP . . . H 2 47.265 -13.557 11.918 1 57.96 ? C4B NAP 401 D 1 
HETATM 7 O O4B NAP . . . H 2 48.258 -12.721 12.066 1 61.56 ? O4B NAP 401 D 1 
HETATM 8 C C3B NAP . . . H 2 47.431 -14.179 10.512 1 61.47 ? C3B NAP 401 D 1 
HETATM 9 O O3B NAP . . . H 2 46.306 -13.992 9.772 1 58.67 ? O3B NAP 401 D 1 
HETATM 10 C C2B NAP . . . H 2 48.641 -13.441 9.898 1 70.55 ? C2B NAP 401 D 1 
HETATM 11 O O2B NAP . . . H 2 48.398 -13.152 8.453 1 78.11 ? O2B NAP 401 D 1 
HETATM 12 C C1B NAP . . . H 2 48.732 -12.334 10.573 1 63.69 ? C1B NAP 401 D 1 
HETATM 13 N N9A NAP . . . H 2 50.099 -11.892 10.596 1 65.51 ? N9A NAP 401 D 1 
HETATM 14 C C8A NAP . . . H 2 51.236 -12.338 11.137 1 68.72 ? C8A NAP 401 D 1 
HETATM 15 N N7A NAP . . . H 2 52.215 -11.487 10.807 1 68.48 ? N7A NAP 401 D 1 
HETATM 16 C C5A NAP . . . H 2 51.674 -10.518 10.06 1 69.86 ? C5A NAP 401 D 1 
HETATM 17 C C6A NAP . . . H 2 52.222 -9.409 9.464 1 68.02 ? C6A NAP 401 D 1 
HETATM 18 N N6A NAP . . . H 2 53.613 -8.998 9.51 1 69.62 ? N6A NAP 401 D 1 
HETATM 19 N N1A NAP . . . H 2 51.454 -8.59 8.762 1 66.51 ? N1A NAP 401 D 1 
HETATM 20 C C2A NAP . . . H 2 50.127 -8.844 8.627 1 66.55 ? C2A NAP 401 D 1 
HETATM 21 N N3A NAP . . . H 2 49.586 -9.937 9.211 1 66.89 ? N3A NAP 401 D 1 
HETATM 22 C C4A NAP . . . H 2 50.366 -10.767 9.926 1 69.75 ? C4A NAP 401 D 1 
HETATM 23 O O3 NAP . . . H 2 46.355 -17.167 14.916 1 53.11 ? O3 NAP 401 D 1 
HETATM 24 P PN NAP . . . H 2 45.039 -16.463 15.64 1 45.44 ? PN NAP 401 D 1 
HETATM 25 O O1N NAP . . . H 2 44.577 -17.393 16.734 1 53.8 ? O1N NAP 401 D 1 
HETATM 26 O O2N NAP . . . H 2 43.954 -16.284 14.599 1 47.65 ? O2N NAP 401 D 1 
HETATM 27 O O5D NAP . . . H 2 45.429 -14.975 16.278 1 49.19 ? O5D NAP 401 D 1 
HETATM 28 C C5D NAP . . . H 2 44.353 -14.066 16.443 1 53.81 ? C5D NAP 401 D 1 
HETATM 29 C C4D NAP . . . H 2 44.659 -13.023 17.568 1 55.02 ? C4D NAP 401 D 1 
HETATM 30 O O4D NAP . . . H 2 44.142 -13.385 18.72 1 60.52 ? O4D NAP 401 D 1 
HETATM 31 C C3D NAP . . . H 2 46.171 -12.9 17.789 1 54.6 ? C3D NAP 401 D 1 
HETATM 32 O O3D NAP . . . H 2 46.487 -11.595 17.945 1 56.81 ? O3D NAP 401 D 1 
HETATM 33 C C2D NAP . . . H 2 46.421 -13.668 19.103 1 61.8 ? C2D NAP 401 D 1 
HETATM 34 O O2D NAP . . . H 2 47.608 -13.084 19.8 1 65.75 ? O2D NAP 401 D 1 
HETATM 35 C C1D NAP . . . H 2 45.332 -13.546 19.807 1 66.09 ? C1D NAP 401 D 1 
HETATM 36 N N1N NAP . . . H 2 45.113 -14.727 20.63 1 68.65 ? N1N NAP 401 D 1 
HETATM 37 C C2N NAP . . . H 2 45.045 -15.954 20.053 1 71.25 ? C2N NAP 401 D 1 
HETATM 38 C C3N NAP . . . H 2 44.837 -17.084 20.835 1 73.38 ? C3N NAP 401 D 1 
HETATM 39 C C7N NAP . . . H 2 44.757 -18.468 20.185 1 75.54 ? C7N NAP 401 D 1 
HETATM 40 O O7N NAP . . . H 2 44.464 -19.402 20.851 1 78.56 ? O7N NAP 401 D 1 
HETATM 41 N N7N NAP . . . H 2 45.036 -18.641 18.763 1 68.29 ? N7N NAP 401 D 1 
HETATM 42 C C4N NAP . . . H 2 44.702 -16.967 22.18 1 70.54 ? C4N NAP 401 D 1 
HETATM 43 C C5N NAP . . . H 2 44.767 -15.74 22.757 1 69.81 ? C5N NAP 401 D 1 
HETATM 44 C C6N NAP . . . H 2 44.975 -14.612 21.975 1 67.34 ? C6N NAP 401 D 1 
HETATM 45 P P2B NAP . . . H 2 48.686 -14.388 7.402 1 83.07 ? P2B NAP 401 D 1 
HETATM 46 O O1X NAP . . . H 2 47.667 -15.484 7.613 1 71.72 ? O1X NAP 401 D 1 
HETATM 47 O O2X NAP . . . H 2 48.586 -13.842 5.994 1 90.35 ? O2X NAP 401 D 1 
HETATM 48 O O3X NAP . . . H 2 50.067 -14.952 7.641 1 64.01 ? O3X NAP 401 D 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           48 
#