data_6NCP
#
_model_server_result.job_id            YbuSoCSCRfLjRbkkQhUPXA 
_model_server_result.datetime_utc      '2024-11-22 08:21:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ncp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":301}' 
#
_entry.id    6NCP 
#
_exptl.entry_id    6NCP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6NCP 
_cell.length_a            78.444 
_cell.length_b            78.444 
_cell.length_c            340.854 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6NCP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? trimeric 3 author_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,F,G,H,K,L,O 1 1 
C,D,E,I,J,M,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 G N N 
? 5 I N N 
? 5 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 97 A CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
disulf ? disulf2 A SG CYS 159 A CYS 140 1_555 A SG CYS 215 A CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf3 B SG CYS 23 B CYS 23 1_555 B SG CYS 88 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf4 B SG CYS 134 B CYS 134 1_555 B SG CYS 194 B CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf5 C SG CYS 22 C CYS 22 1_555 C SG CYS 97 C CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf6 C SG CYS 159 C CYS 140 1_555 C SG CYS 215 C CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? 
disulf ? disulf7 D SG CYS 23 D CYS 23 1_555 D SG CYS 88 D CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf8 D SG CYS 134 D CYS 134 1_555 D SG CYS 194 D CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 290 n n 
S O2 SO4 doub 291 n n 
S O3 SO4 sing 292 n n 
S O4 SO4 sing 293 n n 
#
_atom_sites.entry_id                     6NCP 
_atom_sites.fract_transf_matrix[1][1]    0.012748 
_atom_sites.fract_transf_matrix[1][2]    0.00736 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01472 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002934 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 5 SO4 A 1 301 2 SO4 SO4 . 
H 6 GLY B 1 301 1 GLY GLY . 
I 5 SO4 C 1 301 3 SO4 SO4 . 
J 5 SO4 D 1 301 1 SO4 SO4 . 
K 7 HOH A 1 401 30 HOH HOH . 
K 7 HOH A 2 402 2 HOH HOH . 
K 7 HOH A 3 403 42 HOH HOH . 
K 7 HOH A 4 404 32 HOH HOH . 
K 7 HOH A 5 405 56 HOH HOH . 
K 7 HOH A 6 406 26 HOH HOH . 
K 7 HOH A 7 407 6 HOH HOH . 
K 7 HOH A 8 408 4 HOH HOH . 
K 7 HOH A 9 409 48 HOH HOH . 
K 7 HOH A 10 410 36 HOH HOH . 
L 7 HOH B 1 401 14 HOH HOH . 
L 7 HOH B 2 402 46 HOH HOH . 
L 7 HOH B 3 403 57 HOH HOH . 
L 7 HOH B 4 404 29 HOH HOH . 
L 7 HOH B 5 405 51 HOH HOH . 
L 7 HOH B 6 406 11 HOH HOH . 
L 7 HOH B 7 407 45 HOH HOH . 
L 7 HOH B 8 408 35 HOH HOH . 
L 7 HOH B 9 409 24 HOH HOH . 
L 7 HOH B 10 410 53 HOH HOH . 
L 7 HOH B 11 411 9 HOH HOH . 
L 7 HOH B 12 412 25 HOH HOH . 
L 7 HOH B 13 413 44 HOH HOH . 
L 7 HOH B 14 414 31 HOH HOH . 
M 7 HOH C 1 401 17 HOH HOH . 
M 7 HOH C 2 402 27 HOH HOH . 
M 7 HOH C 3 403 50 HOH HOH . 
M 7 HOH C 4 404 52 HOH HOH . 
M 7 HOH C 5 405 37 HOH HOH . 
M 7 HOH C 6 406 54 HOH HOH . 
M 7 HOH C 7 407 15 HOH HOH . 
M 7 HOH C 8 408 20 HOH HOH . 
M 7 HOH C 9 409 49 HOH HOH . 
M 7 HOH C 10 410 38 HOH HOH . 
M 7 HOH C 11 411 41 HOH HOH . 
M 7 HOH C 12 412 23 HOH HOH . 
M 7 HOH C 13 413 13 HOH HOH . 
M 7 HOH C 14 414 16 HOH HOH . 
M 7 HOH C 15 415 8 HOH HOH . 
M 7 HOH C 16 416 22 HOH HOH . 
N 7 HOH D 1 401 33 HOH HOH . 
N 7 HOH D 2 402 58 HOH HOH . 
N 7 HOH D 3 403 21 HOH HOH . 
N 7 HOH D 4 404 19 HOH HOH . 
N 7 HOH D 5 405 55 HOH HOH . 
N 7 HOH D 6 406 12 HOH HOH . 
N 7 HOH D 7 407 39 HOH HOH . 
N 7 HOH D 8 408 34 HOH HOH . 
N 7 HOH D 9 409 43 HOH HOH . 
N 7 HOH D 10 410 28 HOH HOH . 
N 7 HOH D 11 411 10 HOH HOH . 
N 7 HOH D 12 412 3 HOH HOH . 
N 7 HOH D 13 413 47 HOH HOH . 
N 7 HOH D 14 414 1 HOH HOH . 
N 7 HOH D 15 415 5 HOH HOH . 
N 7 HOH D 16 416 7 HOH HOH . 
N 7 HOH D 17 417 40 HOH HOH . 
N 7 HOH D 18 418 59 HOH HOH . 
N 7 HOH D 19 419 60 HOH HOH . 
O 7 HOH F 1 101 18 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . I 5 88.604 73.034 44.074 1 111.92 ? S SO4 301 C 1 
HETATM 2 O O1 SO4 . . . I 5 89.234 72.029 43.221 1 112.09 ? O1 SO4 301 C 1 
HETATM 3 O O2 SO4 . . . I 5 87.506 73.668 43.349 1 111.92 ? O2 SO4 301 C 1 
HETATM 4 O O3 SO4 . . . I 5 88.087 72.386 45.274 1 111.85 ? O3 SO4 301 C 1 
HETATM 5 O O4 SO4 . . . I 5 89.588 74.046 44.453 1 111.8 ? O4 SO4 301 C 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           5 
#