data_6NEZ
#
_model_server_result.job_id            EfpIse2yav7YgjFUkHz2iA 
_model_server_result.datetime_utc      '2024-12-29 17:28:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6nez 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":201}' 
#
_entry.id    6NEZ 
#
_exptl.entry_id    6NEZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              488.621 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-(3,5-dimethyl-1,2-oxazol-4-yl)-1-[2-(morpholin-4-yl)ethyl]-2-[2-(4-propoxyphenyl)ethyl]-1H-benzimidazole 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6NEZ 
_cell.length_a            58.994 
_cell.length_b            151.493 
_cell.length_c            156.18 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6NEZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,N 1 1 
B,H,I,J,O 2 1 
C,K,L,P 3 1 
D,M,Q 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 H N N 
? 2 K N N 
? 2 M N N 
#
_chem_comp.formula           'C29 H36 N4 O3' 
_chem_comp.formula_weight    488.621 
_chem_comp.id                KJS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-(3,5-dimethyl-1,2-oxazol-4-yl)-1-[2-(morpholin-4-yl)ethyl]-2-[2-(4-propoxyphenyl)ethyl]-1H-benzimidazole 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C20 KJS sing 152 n n 
O1 C19 KJS sing 153 n n 
C20 C21 KJS sing 154 n n 
C21 N2 KJS sing 155 n n 
C19 C18 KJS sing 156 n n 
C18 N2 KJS sing 157 n n 
C8 C7 KJS sing 158 n n 
C8 C9 KJS sing 159 n n 
C7 C6 KJS sing 160 n n 
N2 C17 KJS sing 161 n n 
C5 C6 KJS doub 162 n y 
C5 C4 KJS sing 163 n y 
C17 C16 KJS sing 164 n n 
C6 C27 KJS sing 165 n y 
C4 C3 KJS doub 166 n y 
C9 N KJS doub 167 n y 
C9 N1 KJS sing 168 n y 
N C10 KJS sing 169 n y 
C16 N1 KJS sing 170 n n 
N1 C15 KJS sing 171 n y 
C27 C28 KJS doub 172 n y 
C3 O KJS sing 173 n n 
C3 C28 KJS sing 174 n y 
C10 C15 KJS doub 175 n y 
C10 C11 KJS sing 176 n y 
O C2 KJS sing 177 n n 
C15 C14 KJS sing 178 n y 
C C1 KJS sing 179 n n 
C11 C12 KJS doub 180 n y 
C14 C13 KJS doub 181 n y 
C26 C25 KJS sing 182 n n 
C2 C1 KJS sing 183 n n 
C12 C13 KJS sing 184 n y 
C12 C22 KJS sing 185 n n 
C25 C22 KJS sing 186 n y 
C25 N3 KJS doub 187 n y 
C22 C23 KJS doub 188 n y 
N3 O2 KJS sing 189 n y 
C23 O2 KJS sing 190 n y 
C23 C24 KJS sing 191 n n 
C4 H1 KJS sing 192 n n 
C5 H2 KJS sing 193 n n 
C7 H3 KJS sing 194 n n 
C7 H4 KJS sing 195 n n 
C8 H5 KJS sing 196 n n 
C8 H6 KJS sing 197 n n 
C11 H8 KJS sing 198 n n 
C13 H9 KJS sing 199 n n 
C14 H10 KJS sing 200 n n 
C26 H11 KJS sing 201 n n 
C26 H12 KJS sing 202 n n 
C26 H13 KJS sing 203 n n 
C24 H14 KJS sing 204 n n 
C24 H15 KJS sing 205 n n 
C24 H16 KJS sing 206 n n 
C16 H17 KJS sing 207 n n 
C16 H18 KJS sing 208 n n 
C17 H19 KJS sing 209 n n 
C17 H20 KJS sing 210 n n 
C21 H21 KJS sing 211 n n 
C21 H22 KJS sing 212 n n 
C20 H23 KJS sing 213 n n 
C20 H24 KJS sing 214 n n 
C19 H25 KJS sing 215 n n 
C19 H26 KJS sing 216 n n 
C18 H27 KJS sing 217 n n 
C18 H28 KJS sing 218 n n 
C27 H29 KJS sing 219 n n 
C28 H30 KJS sing 220 n n 
C2 H31 KJS sing 221 n n 
C2 H32 KJS sing 222 n n 
C1 H33 KJS sing 223 n n 
C1 H34 KJS sing 224 n n 
C H35 KJS sing 225 n n 
C H36 KJS sing 226 n n 
C H37 KJS sing 227 n n 
#
_atom_sites.entry_id                     6NEZ 
_atom_sites.fract_transf_matrix[1][1]    0.016951 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006601 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006403 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 KJS A 1 201 1000 KJS XXX . 
F 3 UNX A 1 202 1001 UNX UNX . 
G 3 UNX A 1 203 1005 UNX UNX . 
H 2 KJS B 1 201 1000 KJS XXX . 
I 3 UNX B 1 202 1003 UNX UNX . 
J 3 UNX B 1 203 1004 UNX UNX . 
K 2 KJS C 1 201 1000 KJS XXX . 
L 3 UNX C 1 202 1002 UNX UNX . 
M 2 KJS D 1 201 1000 KJS XXX . 
N 4 HOH A 1 301 25 HOH HOH . 
N 4 HOH A 2 302 111 HOH HOH . 
N 4 HOH A 3 303 16 HOH HOH . 
N 4 HOH A 4 304 74 HOH HOH . 
N 4 HOH A 5 305 18 HOH HOH . 
N 4 HOH A 6 306 83 HOH HOH . 
N 4 HOH A 7 307 62 HOH HOH . 
N 4 HOH A 8 308 22 HOH HOH . 
N 4 HOH A 9 309 67 HOH HOH . 
N 4 HOH A 10 310 51 HOH HOH . 
N 4 HOH A 11 311 1 HOH HOH . 
N 4 HOH A 12 312 3 HOH HOH . 
N 4 HOH A 13 313 102 HOH HOH . 
N 4 HOH A 14 314 39 HOH HOH . 
N 4 HOH A 15 315 57 HOH HOH . 
N 4 HOH A 16 316 109 HOH HOH . 
N 4 HOH A 17 317 69 HOH HOH . 
N 4 HOH A 18 318 27 HOH HOH . 
N 4 HOH A 19 319 38 HOH HOH . 
N 4 HOH A 20 320 76 HOH HOH . 
N 4 HOH A 21 321 4 HOH HOH . 
N 4 HOH A 22 322 112 HOH HOH . 
N 4 HOH A 23 323 46 HOH HOH . 
N 4 HOH A 24 324 68 HOH HOH . 
N 4 HOH A 25 325 48 HOH HOH . 
N 4 HOH A 26 326 110 HOH HOH . 
N 4 HOH A 27 327 52 HOH HOH . 
N 4 HOH A 28 328 64 HOH HOH . 
N 4 HOH A 29 329 7 HOH HOH . 
N 4 HOH A 30 330 114 HOH HOH . 
N 4 HOH A 31 331 75 HOH HOH . 
N 4 HOH A 32 332 77 HOH HOH . 
N 4 HOH A 33 333 8 HOH HOH . 
N 4 HOH A 34 334 40 HOH HOH . 
N 4 HOH A 35 335 72 HOH HOH . 
N 4 HOH A 36 336 94 HOH HOH . 
N 4 HOH A 37 337 113 HOH HOH . 
O 4 HOH B 1 301 2 HOH HOH . 
O 4 HOH B 2 302 44 HOH HOH . 
O 4 HOH B 3 303 80 HOH HOH . 
O 4 HOH B 4 304 70 HOH HOH . 
O 4 HOH B 5 305 21 HOH HOH . 
O 4 HOH B 6 306 84 HOH HOH . 
O 4 HOH B 7 307 78 HOH HOH . 
O 4 HOH B 8 308 31 HOH HOH . 
O 4 HOH B 9 309 79 HOH HOH . 
O 4 HOH B 10 310 108 HOH HOH . 
O 4 HOH B 11 311 58 HOH HOH . 
O 4 HOH B 12 312 85 HOH HOH . 
O 4 HOH B 13 313 29 HOH HOH . 
O 4 HOH B 14 314 43 HOH HOH . 
O 4 HOH B 15 315 41 HOH HOH . 
O 4 HOH B 16 316 10 HOH HOH . 
O 4 HOH B 17 317 60 HOH HOH . 
O 4 HOH B 18 318 116 HOH HOH . 
O 4 HOH B 19 319 65 HOH HOH . 
O 4 HOH B 20 320 61 HOH HOH . 
O 4 HOH B 21 321 19 HOH HOH . 
O 4 HOH B 22 322 15 HOH HOH . 
O 4 HOH B 23 323 30 HOH HOH . 
O 4 HOH B 24 324 82 HOH HOH . 
O 4 HOH B 25 325 13 HOH HOH . 
O 4 HOH B 26 326 118 HOH HOH . 
P 4 HOH C 1 301 120 HOH HOH . 
P 4 HOH C 2 302 88 HOH HOH . 
P 4 HOH C 3 303 87 HOH HOH . 
P 4 HOH C 4 304 55 HOH HOH . 
P 4 HOH C 5 305 47 HOH HOH . 
P 4 HOH C 6 306 66 HOH HOH . 
P 4 HOH C 7 307 35 HOH HOH . 
P 4 HOH C 8 308 23 HOH HOH . 
P 4 HOH C 9 309 86 HOH HOH . 
P 4 HOH C 10 310 49 HOH HOH . 
P 4 HOH C 11 311 9 HOH HOH . 
P 4 HOH C 12 312 103 HOH HOH . 
P 4 HOH C 13 313 37 HOH HOH . 
P 4 HOH C 14 314 101 HOH HOH . 
P 4 HOH C 15 315 104 HOH HOH . 
P 4 HOH C 16 316 73 HOH HOH . 
P 4 HOH C 17 317 91 HOH HOH . 
P 4 HOH C 18 318 121 HOH HOH . 
P 4 HOH C 19 319 59 HOH HOH . 
P 4 HOH C 20 320 115 HOH HOH . 
P 4 HOH C 21 321 50 HOH HOH . 
P 4 HOH C 22 322 90 HOH HOH . 
P 4 HOH C 23 323 89 HOH HOH . 
P 4 HOH C 24 324 56 HOH HOH . 
P 4 HOH C 25 325 119 HOH HOH . 
P 4 HOH C 26 326 100 HOH HOH . 
P 4 HOH C 27 327 63 HOH HOH . 
P 4 HOH C 28 328 81 HOH HOH . 
Q 4 HOH D 1 301 12 HOH HOH . 
Q 4 HOH D 2 302 122 HOH HOH . 
Q 4 HOH D 3 303 95 HOH HOH . 
Q 4 HOH D 4 304 105 HOH HOH . 
Q 4 HOH D 5 305 99 HOH HOH . 
Q 4 HOH D 6 306 98 HOH HOH . 
Q 4 HOH D 7 307 42 HOH HOH . 
Q 4 HOH D 8 308 97 HOH HOH . 
Q 4 HOH D 9 309 33 HOH HOH . 
Q 4 HOH D 10 310 96 HOH HOH . 
Q 4 HOH D 11 311 107 HOH HOH . 
Q 4 HOH D 12 312 17 HOH HOH . 
Q 4 HOH D 13 313 6 HOH HOH . 
Q 4 HOH D 14 314 125 HOH HOH . 
Q 4 HOH D 15 315 124 HOH HOH . 
Q 4 HOH D 16 316 123 HOH HOH . 
Q 4 HOH D 17 317 5 HOH HOH . 
Q 4 HOH D 18 318 71 HOH HOH . 
Q 4 HOH D 19 319 93 HOH HOH . 
Q 4 HOH D 20 320 106 HOH HOH . 
Q 4 HOH D 21 321 92 HOH HOH . 
Q 4 HOH D 22 322 34 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C6 KJS . . . M 2 -7.948 24.51 22.374 1 53.64 ? C6 KJS 201 D 1 
HETATM 2 N N1 KJS . . . M 2 -3.565 23.247 21.368 1 49.16 ? N1 KJS 201 D 1 
HETATM 3 C C7 KJS . . . M 2 -6.802 23.812 21.668 1 60.76 ? C7 KJS 201 D 1 
HETATM 4 C C8 KJS . . . M 2 -5.598 24.729 21.206 1 58.06 ? C8 KJS 201 D 1 
HETATM 5 N N2 KJS . . . M 2 -3.624 22.263 17.704 1 67.71 ? N2 KJS 201 D 1 
HETATM 6 C C9 KJS . . . M 2 -4.287 24.33 21.805 1 53.93 ? C9 KJS 201 D 1 
HETATM 7 C C10 KJS . . . M 2 -2.579 24.193 23.11 1 45.25 ? C10 KJS 201 D 1 
HETATM 8 C C11 KJS . . . M 2 -1.633 24.341 24.131 1 41.16 ? C11 KJS 201 D 1 
HETATM 9 C C12 KJS . . . M 2 -0.585 23.423 24.215 1 38.86 ? C12 KJS 201 D 1 
HETATM 10 N N3 KJS . . . M 2 1.863 24.445 26.769 1 38.88 ? N3 KJS 201 D 1 
HETATM 11 C C13 KJS . . . M 2 -0.491 22.378 23.294 1 41.52 ? C13 KJS 201 D 1 
HETATM 12 C C14 KJS . . . M 2 -1.421 22.227 22.281 1 42.87 ? C14 KJS 201 D 1 
HETATM 13 C C15 KJS . . . M 2 -2.46 23.143 22.211 1 46.02 ? C15 KJS 201 D 1 
HETATM 14 C C26 KJS . . . M 2 1.365 25.982 24.97 1 40.23 ? C26 KJS 201 D 1 
HETATM 15 C C25 KJS . . . M 2 1.203 24.671 25.67 1 39.92 ? C25 KJS 201 D 1 
HETATM 16 O O2 KJS . . . M 2 1.54 23.112 27.152 1 41.14 ? O2 KJS 201 D 1 
HETATM 17 C C23 KJS . . . M 2 0.686 22.605 26.242 1 37.99 ? C23 KJS 201 D 1 
HETATM 18 C C24 KJS . . . M 2 0.302 21.177 26.415 1 37.89 ? C24 KJS 201 D 1 
HETATM 19 C C22 KJS . . . M 2 0.427 23.545 25.295 1 37.17 ? C22 KJS 201 D 1 
HETATM 20 N N KJS . . . M 2 -3.724 24.936 22.83 1 48.68 ? N KJS 201 D 1 
HETATM 21 C C16 KJS . . . M 2 -3.818 22.36 20.229 1 53.76 ? C16 KJS 201 D 1 
HETATM 22 C C17 KJS . . . M 2 -3.156 22.879 18.956 1 59.31 ? C17 KJS 201 D 1 
HETATM 23 C C21 KJS . . . M 2 -3.788 20.808 17.845 1 74.08 ? C21 KJS 201 D 1 
HETATM 24 C C20 KJS . . . M 2 -4.204 20.191 16.529 1 78.6 ? C20 KJS 201 D 1 
HETATM 25 O O1 KJS . . . M 2 -3.263 20.47 15.491 1 78.99 ? O1 KJS 201 D 1 
HETATM 26 C C19 KJS . . . M 2 -3.11 21.885 15.342 1 79.66 ? C19 KJS 201 D 1 
HETATM 27 C C18 KJS . . . M 2 -2.662 22.537 16.629 1 75.96 ? C18 KJS 201 D 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           342 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           27 
#