data_6NF0
#
_model_server_result.job_id            EU4VSZ5PFh2Key25gsHUJw 
_model_server_result.datetime_utc      '2025-01-07 18:38:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6nf0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":502}' 
#
_entry.id    6NF0 
#
_exptl.entry_id    6NF0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          3 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6NF0 
_cell.length_a            62.888 
_cell.length_b            62.888 
_cell.length_c            153.597 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6NF0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 76 A GLU 195 1_555 B CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? 
metalc ? metalc2 B CA CA . A CA 501 1_555 C O2X NDP . A NDP 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.18 ? 
metalc ? metalc3 B CA CA . A CA 501 1_555 C O2B NDP . A NDP 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? 
metalc ? metalc4 B CA CA . A CA 501 1_555 D O HOH . A HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? 
metalc ? metalc5 B CA CA . A CA 501 1_555 D O HOH . A HOH 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                NDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NDP doub 237 n n 
PA O2A NDP sing 238 n n 
PA O5B NDP sing 239 n n 
PA O3 NDP sing 240 n n 
O2A HOA2 NDP sing 241 n n 
O5B C5B NDP sing 242 n n 
C5B C4B NDP sing 243 n n 
C5B H51A NDP sing 244 n n 
C5B H52A NDP sing 245 n n 
C4B O4B NDP sing 246 n n 
C4B C3B NDP sing 247 n n 
C4B H4B NDP sing 248 n n 
O4B C1B NDP sing 249 n n 
C3B O3B NDP sing 250 n n 
C3B C2B NDP sing 251 n n 
C3B H3B NDP sing 252 n n 
O3B HO3A NDP sing 253 n n 
C2B O2B NDP sing 254 n n 
C2B C1B NDP sing 255 n n 
C2B H2B NDP sing 256 n n 
O2B P2B NDP sing 257 n n 
C1B N9A NDP sing 258 n n 
C1B H1B NDP sing 259 n n 
N9A C8A NDP sing 260 n y 
N9A C4A NDP sing 261 n y 
C8A N7A NDP doub 262 n y 
C8A H8A NDP sing 263 n n 
N7A C5A NDP sing 264 n y 
C5A C6A NDP sing 265 n y 
C5A C4A NDP doub 266 n y 
C6A N6A NDP sing 267 n n 
C6A N1A NDP doub 268 n y 
N6A H61A NDP sing 269 n n 
N6A H62A NDP sing 270 n n 
N1A C2A NDP sing 271 n y 
C2A N3A NDP doub 272 n y 
C2A H2A NDP sing 273 n n 
N3A C4A NDP sing 274 n y 
O3 PN NDP sing 275 n n 
PN O1N NDP doub 276 n n 
PN O2N NDP sing 277 n n 
PN O5D NDP sing 278 n n 
O2N H21N NDP sing 279 n n 
O5D C5D NDP sing 280 n n 
C5D C4D NDP sing 281 n n 
C5D H51N NDP sing 282 n n 
C5D H52N NDP sing 283 n n 
C4D O4D NDP sing 284 n n 
C4D C3D NDP sing 285 n n 
C4D H4D NDP sing 286 n n 
O4D C1D NDP sing 287 n n 
C3D O3D NDP sing 288 n n 
C3D C2D NDP sing 289 n n 
C3D H3D NDP sing 290 n n 
O3D HO3N NDP sing 291 n n 
C2D O2D NDP sing 292 n n 
C2D C1D NDP sing 293 n n 
C2D H2D NDP sing 294 n n 
O2D HO2N NDP sing 295 n n 
C1D N1N NDP sing 296 n n 
C1D H1D NDP sing 297 n n 
N1N C2N NDP sing 298 n n 
N1N C6N NDP sing 299 n n 
C2N C3N NDP doub 300 n n 
C2N H2N NDP sing 301 n n 
C3N C7N NDP sing 302 n n 
C3N C4N NDP sing 303 n n 
C7N O7N NDP doub 304 n n 
C7N N7N NDP sing 305 n n 
N7N H71N NDP sing 306 n n 
N7N H72N NDP sing 307 n n 
C4N C5N NDP sing 308 n n 
C4N H41N NDP sing 309 n n 
C4N H42N NDP sing 310 n n 
C5N C6N NDP doub 311 n n 
C5N H5N NDP sing 312 n n 
C6N H6N NDP sing 313 n n 
P2B O1X NDP doub 314 n n 
P2B O2X NDP sing 315 n n 
P2B O3X NDP sing 316 n n 
O2X HOP2 NDP sing 317 n n 
O3X HOP3 NDP sing 318 n n 
#
_atom_sites.entry_id                     6NF0 
_atom_sites.fract_transf_matrix[1][1]    0.015901 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015901 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006511 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA A 1 501 502 CA CA . 
C 3 NDP A 1 502 1 NDP NPH . 
D 4 HOH A 1 601 3 HOH HOH . 
D 4 HOH A 2 602 2 HOH HOH . 
D 4 HOH A 3 603 6 HOH HOH . 
D 4 HOH A 4 604 20 HOH HOH . 
D 4 HOH A 5 605 5 HOH HOH . 
D 4 HOH A 6 606 16 HOH HOH . 
D 4 HOH A 7 607 13 HOH HOH . 
D 4 HOH A 8 608 19 HOH HOH . 
D 4 HOH A 9 609 1 HOH HOH . 
D 4 HOH A 10 610 9 HOH HOH . 
D 4 HOH A 11 611 7 HOH HOH . 
D 4 HOH A 12 612 4 HOH HOH . 
D 4 HOH A 13 613 12 HOH HOH . 
D 4 HOH A 14 614 8 HOH HOH . 
D 4 HOH A 15 615 14 HOH HOH . 
D 4 HOH A 16 616 18 HOH HOH . 
D 4 HOH A 17 617 17 HOH HOH . 
D 4 HOH A 18 618 15 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NDP . . . C 3 -3.23 -28.199 4.486 1 62.64 ? PA NDP 502 A 1 
HETATM 2 O O1A NDP . . . C 3 -2.511 -28.744 5.7 1 59.84 -1 O1A NDP 502 A 1 
HETATM 3 O O2A NDP . . . C 3 -4.228 -29.21 3.97 1 52.56 ? O2A NDP 502 A 1 
HETATM 4 O O5B NDP . . . C 3 -2.122 -27.861 3.311 1 74.11 ? O5B NDP 502 A 1 
HETATM 5 C C5B NDP . . . C 3 -1.303 -26.729 3.486 1 74.05 ? C5B NDP 502 A 1 
HETATM 6 C C4B NDP . . . C 3 -1.365 -25.871 2.189 1 66.56 ? C4B NDP 502 A 1 
HETATM 7 O O4B NDP . . . C 3 0.046 -25.408 1.803 1 58.86 ? O4B NDP 502 A 1 
HETATM 8 C C3B NDP . . . C 3 -1.772 -26.602 1.185 1 69.12 ? C3B NDP 502 A 1 
HETATM 9 O O3B NDP . . . C 3 -2.473 -25.785 0.249 1 68.48 ? O3B NDP 502 A 1 
HETATM 10 C C2B NDP . . . C 3 -0.387 -27.293 0.496 1 72.77 ? C2B NDP 502 A 1 
HETATM 11 O O2B NDP . . . C 3 -0.551 -27.455 -0.954 1 73.35 ? O2B NDP 502 A 1 
HETATM 12 C C1B NDP . . . C 3 0.578 -26.517 0.752 1 71.13 ? C1B NDP 502 A 1 
HETATM 13 N N9A NDP . . . C 3 1.728 -27.257 1.321 1 87.94 ? N9A NDP 502 A 1 
HETATM 14 C C8A NDP . . . C 3 2.096 -28.487 0.995 1 89.38 ? C8A NDP 502 A 1 
HETATM 15 N N7A NDP . . . C 3 3.169 -28.837 1.69 1 93.19 ? N7A NDP 502 A 1 
HETATM 16 C C5A NDP . . . C 3 3.514 -27.811 2.488 1 93.84 ? C5A NDP 502 A 1 
HETATM 17 C C6A NDP . . . C 3 4.528 -27.564 3.436 1 85.76 ? C6A NDP 502 A 1 
HETATM 18 N N6A NDP . . . C 3 5.52 -28.586 3.724 1 84.56 ? N6A NDP 502 A 1 
HETATM 19 N N1A NDP . . . C 3 4.574 -26.394 4.063 1 79.16 ? N1A NDP 502 A 1 
HETATM 20 C C2A NDP . . . C 3 3.672 -25.456 3.803 1 80.9 ? C2A NDP 502 A 1 
HETATM 21 N N3A NDP . . . C 3 2.698 -25.638 2.924 1 89.2 ? N3A NDP 502 A 1 
HETATM 22 C C4A NDP . . . C 3 2.596 -26.802 2.254 1 92.08 ? C4A NDP 502 A 1 
HETATM 23 O O3 NDP . . . C 3 -3.981 -26.763 4.843 1 58.02 ? O3 NDP 502 A 1 
HETATM 24 P PN NDP . . . C 3 -5.321 -26.538 5.787 1 50.93 ? PN NDP 502 A 1 
HETATM 25 O O1N NDP . . . C 3 -6.543 -26.42 4.911 1 47.79 -1 O1N NDP 502 A 1 
HETATM 26 O O2N NDP . . . C 3 -5.505 -27.692 6.742 1 52.73 ? O2N NDP 502 A 1 
HETATM 27 O O5D NDP . . . C 3 -5.127 -25.12 6.619 1 62.71 ? O5D NDP 502 A 1 
HETATM 28 C C5D NDP . . . C 3 -3.991 -24.933 7.434 1 70.76 ? C5D NDP 502 A 1 
HETATM 29 C C4D NDP . . . C 3 -4.497 -24.451 8.835 1 73.38 ? C4D NDP 502 A 1 
HETATM 30 O O4D NDP . . . C 3 -3.9 -23.401 9.266 1 75.64 ? O4D NDP 502 A 1 
HETATM 31 C C3D NDP . . . C 3 -5.998 -24.036 8.724 1 72.03 ? C3D NDP 502 A 1 
HETATM 32 O O3D NDP . . . C 3 -6.789 -24.927 9.377 1 78.84 ? O3D NDP 502 A 1 
HETATM 33 C C2D NDP . . . C 3 -6.069 -22.693 9.42 1 68.02 ? C2D NDP 502 A 1 
HETATM 34 O O2D NDP . . . C 3 -7.347 -22.607 10.206 1 66.25 ? O2D NDP 502 A 1 
HETATM 35 C C1D NDP . . . C 3 -5.042 -22.74 10.213 1 76.67 ? C1D NDP 502 A 1 
HETATM 36 N N1N NDP . . . C 3 -4.719 -21.433 10.744 1 82.17 ? N1N NDP 502 A 1 
HETATM 37 C C2N NDP . . . C 3 -5.476 -20.265 10.352 1 81.42 ? C2N NDP 502 A 1 
HETATM 38 C C3N NDP . . . C 3 -5.83 -19.235 11.424 1 89.43 ? C3N NDP 502 A 1 
HETATM 39 C C7N NDP . . . C 3 -6.91 -18.193 11.125 1 88.86 ? C7N NDP 502 A 1 
HETATM 40 O O7N NDP . . . C 3 -7.015 -17.227 11.805 1 89.34 ? O7N NDP 502 A 1 
HETATM 41 N N7N NDP . . . C 3 -7.811 -18.392 10.001 1 81.27 ? N7N NDP 502 A 1 
HETATM 42 C C4N NDP . . . C 3 -4.943 -19.105 12.671 1 97.2 ? C4N NDP 502 A 1 
HETATM 43 C C5N NDP . . . C 3 -3.803 -20.134 12.757 1 94.08 ? C5N NDP 502 A 1 
HETATM 44 C C6N NDP . . . C 3 -3.677 -21.266 11.734 1 88.1 ? C6N NDP 502 A 1 
HETATM 45 P P2B NDP . . . C 3 -0.7 -28.959 -1.636 1 54.82 ? P2B NDP 502 A 1 
HETATM 46 O O1X NDP . . . C 3 -2.131 -29.421 -1.517 1 49.29 ? O1X NDP 502 A 1 
HETATM 47 O O2X NDP . . . C 3 -0.312 -28.916 -3.092 1 46.92 -1 O2X NDP 502 A 1 
HETATM 48 O O3X NDP . . . C 3 0.214 -29.932 -0.932 1 69.37 ? O3X NDP 502 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           48 
#