data_6NF1
#
_model_server_result.job_id            0j7IRwp7_k0paDlQ3VcdLQ 
_model_server_result.datetime_utc      '2025-05-23 04:18:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6nf1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":601}' 
#
_entry.id    6NF1 
#
_exptl.entry_id    6NF1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              457.589 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2S)-3-[(3S)-1-(ethylsulfonyl)piperidin-3-yl]-2-{[3-(4-methylphenyl)imidazo[1,2-a]pyrazin-8-yl]amino}propan-1-ol 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.06 
_cell.angle_gamma         90 
_cell.entry_id            6NF1 
_cell.length_a            67.134 
_cell.length_b            57.742 
_cell.length_c            89.419 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6NF1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A ND1 HIS 519 A HIS 516 1_555 E ZN ZN . A ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? 
metalc ? metalc2 A SG CYS 532 A CYS 529 1_555 D ZN ZN . A ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? 
metalc ? metalc3 A SG CYS 535 A CYS 532 1_555 D ZN ZN . A ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? 
metalc ? metalc4 A SG CYS 549 A CYS 546 1_555 E ZN ZN . A ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? 
metalc ? metalc5 A SG CYS 552 A CYS 549 1_555 E ZN ZN . A ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? 
metalc ? metalc6 A ND1 HIS 557 A HIS 554 1_555 D ZN ZN . A ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? 
metalc ? metalc7 A SG CYS 560 A CYS 557 1_555 D ZN ZN . A ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? 
metalc ? metalc8 A SG CYS 567 A CYS 564 1_555 E ZN ZN . A ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? 
#
_chem_comp.formula           'C23 H31 N5 O3 S' 
_chem_comp.formula_weight    457.589 
_chem_comp.id                9JY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2S)-3-[(3S)-1-(ethylsulfonyl)piperidin-3-yl]-2-{[3-(4-methylphenyl)imidazo[1,2-a]pyrazin-8-yl]amino}propan-1-ol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O2 C8 9JY sing 1 n n 
C8 C7 9JY sing 2 n n 
C7 C6 9JY sing 3 n n 
C7 N1 9JY sing 4 n n 
C6 C5 9JY sing 5 n n 
N1 C9 9JY sing 6 n n 
C5 C4 9JY sing 7 n n 
C5 C22 9JY sing 8 n n 
C4 C3 9JY sing 9 n n 
N4 C14 9JY doub 10 n y 
N4 C13 9JY sing 11 n y 
C9 C14 9JY sing 12 n y 
C9 N2 9JY doub 13 n y 
C14 N3 9JY sing 14 n y 
N2 C10 9JY sing 15 n y 
C22 N 9JY sing 16 n n 
C13 C12 9JY doub 17 n y 
C3 C2 9JY sing 18 n n 
N3 C12 9JY sing 19 n y 
N3 C11 9JY sing 20 n y 
C10 C11 9JY doub 21 n y 
C12 C15 9JY sing 22 n n 
N C2 9JY sing 23 n n 
N S 9JY sing 24 n n 
C C1 9JY sing 25 n n 
O S 9JY doub 26 n n 
C15 C21 9JY doub 27 n y 
C15 C16 9JY sing 28 n y 
C1 S 9JY sing 29 n n 
S O1 9JY doub 30 n n 
C21 C20 9JY sing 31 n y 
C16 C17 9JY doub 32 n y 
C20 C18 9JY doub 33 n y 
C17 C18 9JY sing 34 n y 
C18 C19 9JY sing 35 n n 
C1 H1 9JY sing 36 n n 
C1 H2 9JY sing 37 n n 
C2 H3 9JY sing 38 n n 
C2 H4 9JY sing 39 n n 
C3 H5 9JY sing 40 n n 
C3 H6 9JY sing 41 n n 
O2 H7 9JY sing 42 n n 
C11 H8 9JY sing 43 n n 
C13 H9 9JY sing 44 n n 
C16 H10 9JY sing 45 n n 
C17 H11 9JY sing 46 n n 
C19 H12 9JY sing 47 n n 
C19 H13 9JY sing 48 n n 
C19 H14 9JY sing 49 n n 
C20 H15 9JY sing 50 n n 
C21 H16 9JY sing 51 n n 
C22 H17 9JY sing 52 n n 
C22 H18 9JY sing 53 n n 
C H19 9JY sing 54 n n 
C H20 9JY sing 55 n n 
C H21 9JY sing 56 n n 
C5 H22 9JY sing 57 n n 
C4 H23 9JY sing 58 n n 
C4 H24 9JY sing 59 n n 
C6 H25 9JY sing 60 n n 
C6 H26 9JY sing 61 n n 
C7 H27 9JY sing 62 n n 
C8 H28 9JY sing 63 n n 
C8 H29 9JY sing 64 n n 
N1 H30 9JY sing 65 n n 
C10 H31 9JY sing 66 n n 
#
_atom_sites.entry_id                     6NF1 
_atom_sites.fract_transf_matrix[1][1]    0.014896 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003455 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017318 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01148 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 9JY A 1 601 1 9JY LI1 . 
C 3 MES A 1 602 1 MES MES . 
D 4 ZN A 1 603 2 ZN ZN . 
E 4 ZN A 1 604 3 ZN ZN . 
F 5 HOH A 1 701 25 HOH HOH . 
F 5 HOH A 2 702 33 HOH HOH . 
F 5 HOH A 3 703 36 HOH HOH . 
F 5 HOH A 4 704 37 HOH HOH . 
F 5 HOH A 5 705 27 HOH HOH . 
F 5 HOH A 6 706 39 HOH HOH . 
F 5 HOH A 7 707 42 HOH HOH . 
F 5 HOH A 8 708 3 HOH HOH . 
F 5 HOH A 9 709 22 HOH HOH . 
F 5 HOH A 10 710 40 HOH HOH . 
F 5 HOH A 11 711 31 HOH HOH . 
F 5 HOH A 12 712 46 HOH HOH . 
F 5 HOH A 13 713 2 HOH HOH . 
F 5 HOH A 14 714 21 HOH HOH . 
F 5 HOH A 15 715 1 HOH HOH . 
F 5 HOH A 16 716 5 HOH HOH . 
F 5 HOH A 17 717 16 HOH HOH . 
F 5 HOH A 18 718 44 HOH HOH . 
F 5 HOH A 19 719 8 HOH HOH . 
F 5 HOH A 20 720 13 HOH HOH . 
F 5 HOH A 21 721 18 HOH HOH . 
F 5 HOH A 22 722 38 HOH HOH . 
F 5 HOH A 23 723 54 HOH HOH . 
F 5 HOH A 24 724 51 HOH HOH . 
F 5 HOH A 25 725 10 HOH HOH . 
F 5 HOH A 26 726 55 HOH HOH . 
F 5 HOH A 27 727 45 HOH HOH . 
F 5 HOH A 28 728 23 HOH HOH . 
F 5 HOH A 29 729 17 HOH HOH . 
F 5 HOH A 30 730 11 HOH HOH . 
F 5 HOH A 31 731 24 HOH HOH . 
F 5 HOH A 32 732 50 HOH HOH . 
F 5 HOH A 33 733 43 HOH HOH . 
F 5 HOH A 34 734 30 HOH HOH . 
F 5 HOH A 35 735 7 HOH HOH . 
F 5 HOH A 36 736 12 HOH HOH . 
F 5 HOH A 37 737 28 HOH HOH . 
F 5 HOH A 38 738 6 HOH HOH . 
F 5 HOH A 39 739 14 HOH HOH . 
F 5 HOH A 40 740 53 HOH HOH . 
F 5 HOH A 41 741 4 HOH HOH . 
F 5 HOH A 42 742 47 HOH HOH . 
F 5 HOH A 43 743 35 HOH HOH . 
F 5 HOH A 44 744 49 HOH HOH . 
F 5 HOH A 45 745 48 HOH HOH . 
F 5 HOH A 46 746 41 HOH HOH . 
F 5 HOH A 47 747 32 HOH HOH . 
F 5 HOH A 48 748 9 HOH HOH . 
F 5 HOH A 49 749 19 HOH HOH . 
F 5 HOH A 50 750 52 HOH HOH . 
F 5 HOH A 51 751 15 HOH HOH . 
F 5 HOH A 52 752 26 HOH HOH . 
F 5 HOH A 53 753 34 HOH HOH . 
F 5 HOH A 54 754 20 HOH HOH . 
F 5 HOH A 55 755 29 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 9JY . . . B 2 27.159 -15.474 21.505 1 55.76 ? C1 9JY 601 A 1 
HETATM 2 C C2 9JY . . . B 2 24.987 -12.613 20.507 1 39.71 ? C2 9JY 601 A 1 
HETATM 3 C C3 9JY . . . B 2 24.103 -12.313 19.304 1 35.49 ? C3 9JY 601 A 1 
HETATM 4 O O1 9JY . . . B 2 26.43 -13.265 22.656 1 50.06 ? O1 9JY 601 A 1 
HETATM 5 O O2 9JY . . . B 2 30.219 -11.87 14.932 1 45.52 ? O2 9JY 601 A 1 
HETATM 6 C C11 9JY . . . B 2 31.157 -10.244 20.563 1 52.3 ? C11 9JY 601 A 1 
HETATM 7 C C12 9JY . . . B 2 30.981 -7.764 20.102 1 53.13 ? C12 9JY 601 A 1 
HETATM 8 C C13 9JY . . . B 2 30.369 -7.115 19.055 1 53.02 ? C13 9JY 601 A 1 
HETATM 9 C C14 9JY . . . B 2 29.995 -9.205 18.705 1 53.53 ? C14 9JY 601 A 1 
HETATM 10 C C15 9JY . . . B 2 31.701 -7.221 21.272 1 52.92 ? C15 9JY 601 A 1 
HETATM 11 C C16 9JY . . . B 2 31.156 -6.171 22.008 1 53.45 ? C16 9JY 601 A 1 
HETATM 12 C C17 9JY . . . B 2 31.886 -5.565 23.019 1 53.73 ? C17 9JY 601 A 1 
HETATM 13 C C18 9JY . . . B 2 33.173 -5.987 23.333 1 50.41 ? C18 9JY 601 A 1 
HETATM 14 C C19 9JY . . . B 2 33.96 -5.323 24.432 1 47.92 ? C19 9JY 601 A 1 
HETATM 15 C C20 9JY . . . B 2 33.705 -7.046 22.609 1 50.55 ? C20 9JY 601 A 1 
HETATM 16 C C21 9JY . . . B 2 32.982 -7.666 21.602 1 52.09 ? C21 9JY 601 A 1 
HETATM 17 C C22 9JY . . . B 2 27.002 -12.604 19.073 1 39.65 ? C22 9JY 601 A 1 
HETATM 18 S S 9JY . . . B 2 27.157 -13.697 21.506 1 51.94 ? S 9JY 601 A 1 
HETATM 19 O O 9JY . . . B 2 28.494 -13.23 21.322 1 53.46 ? O 9JY 601 A 1 
HETATM 20 C C 9JY . . . B 2 27.896 -16.116 20.357 1 57.97 ? C 9JY 601 A 1 
HETATM 21 N N 9JY . . . B 2 26.295 -13.239 20.205 1 46.11 ? N 9JY 601 A 1 
HETATM 22 C C5 9JY . . . B 2 26.127 -12.415 17.836 1 37.17 ? C5 9JY 601 A 1 
HETATM 23 C C4 9JY . . . B 2 24.899 -11.608 18.216 1 34 ? C4 9JY 601 A 1 
HETATM 24 C C6 9JY . . . B 2 26.839 -11.823 16.619 1 38.8 ? C6 9JY 601 A 1 
HETATM 25 C C7 9JY . . . B 2 28.356 -11.835 16.501 1 44.93 ? C7 9JY 601 A 1 
HETATM 26 C C8 9JY . . . B 2 28.797 -11.896 15.048 1 44.75 ? C8 9JY 601 A 1 
HETATM 27 N N1 9JY . . . B 2 28.902 -10.651 17.159 1 48.45 ? N1 9JY 601 A 1 
HETATM 28 C C9 9JY . . . B 2 29.656 -10.579 18.272 1 51.02 ? C9 9JY 601 A 1 
HETATM 29 N N3 9JY . . . B 2 30.748 -9.118 19.869 1 53.19 ? N3 9JY 601 A 1 
HETATM 30 C C10 9JY . . . B 2 30.818 -11.455 20.093 1 49.91 ? C10 9JY 601 A 1 
HETATM 31 N N2 9JY . . . B 2 30.077 -11.65 18.965 1 49.71 ? N2 9JY 601 A 1 
HETATM 32 N N4 9JY . . . B 2 29.755 -8.002 18.204 1 54.73 ? N4 9JY 601 A 1 
#
_model_server_stats.io_time_ms              131 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           32 
#