data_6NF4 # _model_server_result.job_id TMuJrcql7HSH3FSWl9av8w _model_server_result.datetime_utc '2025-09-03 22:03:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6nf4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":603}' # _entry.id 6NF4 # _exptl.entry_id 6NF4 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 486.726 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLESTEROL HEMISUCCINATE' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6NF4 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NF4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 I N N ? 2 J N N # _chem_comp.formula 'C31 H50 O4' _chem_comp.formula_weight 486.726 _chem_comp.id Y01 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLESTEROL HEMISUCCINATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CBA Y01 sing 451 n n CBA CAB Y01 sing 452 n n CBA CAN Y01 sing 453 n n CAN CAJ Y01 sing 454 n n CAJ CAO Y01 sing 455 n n CAO CBB Y01 sing 456 n n CBB CAC Y01 sing 457 n n CBB CBE Y01 sing 458 n n CBE CAP Y01 sing 459 n n CBE CBI Y01 sing 460 n n CAP CAQ Y01 sing 461 n n CAQ CBG Y01 sing 462 n n CBG CBI Y01 sing 463 n n CBG CBD Y01 sing 464 n n CBI CAE Y01 sing 465 n n CBI CAU Y01 sing 466 n n CAU CAS Y01 sing 467 n n CAS CBF Y01 sing 468 n n CBF CBD Y01 sing 469 n n CBF CBH Y01 sing 470 n n CBD CAK Y01 sing 471 n n CAK CAI Y01 sing 472 n n CAI CAZ Y01 doub 473 n n CAZ CAV Y01 sing 474 n n CAZ CBH Y01 sing 475 n n CAV CBC Y01 sing 476 n n CBH CAD Y01 sing 477 n n CBH CAT Y01 sing 478 n n CAT CAR Y01 sing 479 n n CAR CBC Y01 sing 480 n n CBC OAW Y01 sing 481 n n OAW CAY Y01 sing 482 n n CAY OAG Y01 doub 483 n n CAY CAM Y01 sing 484 n n CAM CAL Y01 sing 485 n n CAL CAX Y01 sing 486 n n CAX OAH Y01 sing 487 n n CAX OAF Y01 doub 488 n n CAA HAA1 Y01 sing 489 n n CAA HAA2 Y01 sing 490 n n CAA HAA3 Y01 sing 491 n n CBA HBA Y01 sing 492 n n CAB HAB1 Y01 sing 493 n n CAB HAB2 Y01 sing 494 n n CAB HAB3 Y01 sing 495 n n CAN HAN1 Y01 sing 496 n n CAN HAN2 Y01 sing 497 n n CAJ HAJ1 Y01 sing 498 n n CAJ HAJ2 Y01 sing 499 n n CAO HAO1 Y01 sing 500 n n CAO HAO2 Y01 sing 501 n n CBB HBB Y01 sing 502 n n CAC HAC1 Y01 sing 503 n n CAC HAC2 Y01 sing 504 n n CAC HAC3 Y01 sing 505 n n CBE HBE Y01 sing 506 n n CAP HAP1 Y01 sing 507 n n CAP HAP2 Y01 sing 508 n n CAQ HAQ1 Y01 sing 509 n n CAQ HAQ2 Y01 sing 510 n n CBG HBG Y01 sing 511 n n CBD HBD Y01 sing 512 n n CAE HAE1 Y01 sing 513 n n CAE HAE2 Y01 sing 514 n n CAE HAE3 Y01 sing 515 n n CAU HAU1 Y01 sing 516 n n CAU HAU2 Y01 sing 517 n n CAS HAS1 Y01 sing 518 n n CAS HAS2 Y01 sing 519 n n CBF HBF Y01 sing 520 n n CAK HAK1 Y01 sing 521 n n CAK HAK2 Y01 sing 522 n n CAI HAI Y01 sing 523 n n CAV HAV1 Y01 sing 524 n n CAV HAV2 Y01 sing 525 n n CBC HBC Y01 sing 526 n n CAD HAD1 Y01 sing 527 n n CAD HAD2 Y01 sing 528 n n CAD HAD3 Y01 sing 529 n n CAT HAT1 Y01 sing 530 n n CAT HAT2 Y01 sing 531 n n CAR HAR1 Y01 sing 532 n n CAR HAR2 Y01 sing 533 n n CAM HAM1 Y01 sing 534 n n CAM HAM2 Y01 sing 535 n n CAL HAL1 Y01 sing 536 n n CAL HAL2 Y01 sing 537 n n OAH HAH Y01 sing 538 n n # _atom_sites.entry_id 6NF4 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 Y01 A 1 601 7 Y01 LIG . D 3 CLR A 1 602 2 CLR CLR . E 2 Y01 A 1 603 5 Y01 LIG . F 2 Y01 A 1 604 1 Y01 LIG . G 2 Y01 B 1 601 7 Y01 LIG . H 3 CLR B 1 602 2 CLR CLR . I 2 Y01 B 1 603 1 Y01 LIG . J 2 Y01 B 1 604 5 Y01 LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Y01 . . . E 2 104.893 100.808 100.701 1 75.82 ? CAA Y01 603 A 1 HETATM 2 C CBA Y01 . . . E 2 106.335 100.293 100.73 1 75.82 ? CBA Y01 603 A 1 HETATM 3 C CAB Y01 . . . E 2 107.174 101.262 99.903 1 75.82 ? CAB Y01 603 A 1 HETATM 4 C CAN Y01 . . . E 2 106.907 100.324 102.147 1 75.82 ? CAN Y01 603 A 1 HETATM 5 C CAJ Y01 . . . E 2 105.947 99.686 103.145 1 75.82 ? CAJ Y01 603 A 1 HETATM 6 C CAO Y01 . . . E 2 106.065 100.475 104.446 1 75.82 ? CAO Y01 603 A 1 HETATM 7 C CBB Y01 . . . E 2 106.14 99.535 105.654 1 75.82 ? CBB Y01 603 A 1 HETATM 8 C CAC Y01 . . . E 2 107.327 98.604 105.413 1 75.82 ? CAC Y01 603 A 1 HETATM 9 C CBE Y01 . . . E 2 106.304 100.313 106.986 1 75.82 ? CBE Y01 603 A 1 HETATM 10 C CAP Y01 . . . E 2 105.481 101.634 106.941 1 75.82 ? CAP Y01 603 A 1 HETATM 11 C CAQ Y01 . . . E 2 104.485 101.579 108.12 1 75.82 ? CAQ Y01 603 A 1 HETATM 12 C CBG Y01 . . . E 2 105.352 100.817 109.119 1 75.82 ? CBG Y01 603 A 1 HETATM 13 C CBI Y01 . . . E 2 105.82 99.598 108.266 1 75.82 ? CBI Y01 603 A 1 HETATM 14 C CAE Y01 . . . E 2 104.675 98.64 107.939 1 75.82 ? CAE Y01 603 A 1 HETATM 15 C CAU Y01 . . . E 2 106.837 98.868 109.129 1 75.82 ? CAU Y01 603 A 1 HETATM 16 C CAS Y01 . . . E 2 106.198 98.43 110.468 1 75.82 ? CAS Y01 603 A 1 HETATM 17 C CBF Y01 . . . E 2 105.659 99.614 111.273 1 75.82 ? CBF Y01 603 A 1 HETATM 18 C CBD Y01 . . . E 2 104.659 100.383 110.4 1 75.82 ? CBD Y01 603 A 1 HETATM 19 C CAK Y01 . . . E 2 104.235 101.671 111.115 1 75.82 ? CAK Y01 603 A 1 HETATM 20 C CAI Y01 . . . E 2 103.915 101.43 112.558 1 75.82 ? CAI Y01 603 A 1 HETATM 21 C CAZ Y01 . . . E 2 104.25 100.354 113.193 1 75.82 ? CAZ Y01 603 A 1 HETATM 22 C CAV Y01 . . . E 2 103.65 100.18 114.568 1 75.82 ? CAV Y01 603 A 1 HETATM 23 C CBH Y01 . . . E 2 104.958 99.195 112.556 1 75.82 ? CBH Y01 603 A 1 HETATM 24 C CAD Y01 . . . E 2 103.925 98.125 112.214 1 75.82 ? CAD Y01 603 A 1 HETATM 25 C CAT Y01 . . . E 2 105.93 98.574 113.56 1 75.82 ? CAT Y01 603 A 1 HETATM 26 C CAR Y01 . . . E 2 105.293 98.387 114.942 1 75.82 ? CAR Y01 603 A 1 HETATM 27 C CBC Y01 . . . E 2 104.754 99.705 115.501 1 75.82 ? CBC Y01 603 A 1 HETATM 28 O OAW Y01 . . . E 2 104.192 99.484 116.822 1 75.82 ? OAW Y01 603 A 1 HETATM 29 C CAY Y01 . . . E 2 103.529 100.494 117.411 1 75.82 ? CAY Y01 603 A 1 HETATM 30 O OAG Y01 . . . E 2 104.054 101.573 117.54 1 75.82 ? OAG Y01 603 A 1 HETATM 31 C CAM Y01 . . . E 2 102.128 100.289 117.922 1 75.82 ? CAM Y01 603 A 1 HETATM 32 C CAL Y01 . . . E 2 101.945 101.074 119.22 1 75.82 ? CAL Y01 603 A 1 HETATM 33 C CAX Y01 . . . E 2 102.622 100.327 120.337 1 75.82 ? CAX Y01 603 A 1 HETATM 34 O OAH Y01 . . . E 2 101.947 99.398 121.031 1 75.82 ? OAH Y01 603 A 1 HETATM 35 O OAF Y01 . . . E 2 103.776 100.562 120.601 1 75.82 ? OAF Y01 603 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 35 #