data_6NFK # _model_server_result.job_id mlRqdi-XfZXjCvdE_Tph0w _model_server_result.datetime_utc '2024-10-19 13:19:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6nfk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":404}' # _entry.id 6NFK # _exptl.entry_id 6NFK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6NFK _cell.length_a 50.6 _cell.length_b 50.6 _cell.length_c 149.3 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NFK _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 91 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 284 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 96 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 289 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.44 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6NFK _atom_sites.fract_transf_matrix[1][1] 0.019763 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019763 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006698 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 401 401 EDO EDO . C 2 EDO A 1 402 402 EDO EDO . D 2 EDO A 1 403 403 EDO EDO . E 3 IOD A 1 404 404 IOD IOD . F 4 HOH A 1 501 502 HOH HOH . F 4 HOH A 2 502 501 HOH HOH . F 4 HOH A 3 503 503 HOH HOH . F 4 HOH A 4 504 505 HOH HOH . F 4 HOH A 5 505 506 HOH HOH . F 4 HOH A 6 506 508 HOH HOH . F 4 HOH A 7 507 513 HOH HOH . F 4 HOH A 8 508 509 HOH HOH . F 4 HOH A 9 509 507 HOH HOH . F 4 HOH A 10 510 504 HOH HOH . F 4 HOH A 11 511 512 HOH HOH . F 4 HOH A 12 512 514 HOH HOH . F 4 HOH A 13 513 524 HOH HOH . F 4 HOH A 14 514 525 HOH HOH . F 4 HOH A 15 515 519 HOH HOH . F 4 HOH A 16 516 522 HOH HOH . F 4 HOH A 17 517 510 HOH HOH . F 4 HOH A 18 518 520 HOH HOH . F 4 HOH A 19 519 511 HOH HOH . F 4 HOH A 20 520 521 HOH HOH . F 4 HOH A 21 521 517 HOH HOH . F 4 HOH A 22 522 516 HOH HOH . F 4 HOH A 23 523 523 HOH HOH . F 4 HOH A 24 524 534 HOH HOH . F 4 HOH A 25 525 538 HOH HOH . F 4 HOH A 26 526 529 HOH HOH . F 4 HOH A 27 527 515 HOH HOH . F 4 HOH A 28 528 518 HOH HOH . F 4 HOH A 29 529 533 HOH HOH . F 4 HOH A 30 530 532 HOH HOH . F 4 HOH A 31 531 527 HOH HOH . F 4 HOH A 32 532 526 HOH HOH . F 4 HOH A 33 533 530 HOH HOH . F 4 HOH A 34 534 536 HOH HOH . F 4 HOH A 35 535 528 HOH HOH . F 4 HOH A 36 536 535 HOH HOH . F 4 HOH A 37 537 531 HOH HOH . F 4 HOH A 38 538 543 HOH HOH . F 4 HOH A 39 539 539 HOH HOH . F 4 HOH A 40 540 540 HOH HOH . F 4 HOH A 41 541 545 HOH HOH . F 4 HOH A 42 542 537 HOH HOH . F 4 HOH A 43 543 542 HOH HOH . F 4 HOH A 44 544 548 HOH HOH . F 4 HOH A 45 545 544 HOH HOH . F 4 HOH A 46 546 547 HOH HOH . F 4 HOH A 47 547 558 HOH HOH . F 4 HOH A 48 548 550 HOH HOH . F 4 HOH A 49 549 546 HOH HOH . F 4 HOH A 50 550 541 HOH HOH . F 4 HOH A 51 551 556 HOH HOH . F 4 HOH A 52 552 555 HOH HOH . F 4 HOH A 53 553 557 HOH HOH . F 4 HOH A 54 554 551 HOH HOH . F 4 HOH A 55 555 552 HOH HOH . F 4 HOH A 56 556 553 HOH HOH . F 4 HOH A 57 557 554 HOH HOH . F 4 HOH A 58 558 549 HOH HOH . F 4 HOH A 59 559 559 HOH HOH . F 4 HOH A 60 560 562 HOH HOH . F 4 HOH A 61 561 560 HOH HOH . F 4 HOH A 62 562 565 HOH HOH . F 4 HOH A 63 563 564 HOH HOH . F 4 HOH A 64 564 561 HOH HOH . F 4 HOH A 65 565 563 HOH HOH . F 4 HOH A 66 566 566 HOH HOH . F 4 HOH A 67 567 568 HOH HOH . F 4 HOH A 68 568 569 HOH HOH . F 4 HOH A 69 569 567 HOH HOH . F 4 HOH A 70 570 571 HOH HOH . F 4 HOH A 71 571 570 HOH HOH . F 4 HOH A 72 572 572 HOH HOH . F 4 HOH A 73 573 573 HOH HOH . F 4 HOH A 74 574 574 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -9.795 _atom_site.Cartn_y -24.806 _atom_site.Cartn_z -11.517 _atom_site.occupancy 0.82 _atom_site.B_iso_or_equiv 46.49 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 404 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #