data_6NFQ # _model_server_result.job_id uDIHE3P-1MPuoBefMpaAcg _model_server_result.datetime_utc '2024-10-19 12:41:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6nfq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 6NFQ # _exptl.entry_id 6NFQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6NFQ _cell.length_a 77.73 _cell.length_b 111.319 _cell.length_c 82.222 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NFQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,H 1 1 B,F,I 2 1 C,G,J 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A N HIS 25 A HIS 25 1_555 D CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc2 A ND1 HIS 25 A HIS 25 1_555 D CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc3 A OE1 GLU 68 A GLU 68 1_555 E Y YT3 . A YT3 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc4 A OE2 GLU 68 A GLU 68 1_555 E Y YT3 . A YT3 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc5 A OE1 GLU 68 A GLU 68 1_555 E Y YT3 . A YT3 202 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc6 A OE2 GLU 68 A GLU 68 1_555 E Y YT3 . A YT3 202 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc7 A OD2 ASP 107 A ASP 107 1_555 D CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.621 ? metalc ? metalc8 A ND1 HIS 109 A HIS 109 1_555 D CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.832 ? metalc ? metalc9 E Y YT3 . A YT3 202 1_555 H O HOH . A HOH 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc10 E Y YT3 . A YT3 202 1_555 H O HOH . A HOH 312 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc11 B N HIS 25 B HIS 25 1_555 F CU CU . B CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc12 B ND1 HIS 25 B HIS 25 1_555 F CU CU . B CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc13 B OD2 ASP 107 B ASP 107 1_555 F CU CU . B CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc14 B ND1 HIS 109 B HIS 109 1_555 F CU CU . B CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc15 C N HIS 25 C HIS 25 1_555 G CU CU . C CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc16 C ND1 HIS 25 C HIS 25 1_555 G CU CU . C CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? metalc ? metalc17 C OD2 ASP 107 C ASP 107 1_555 G CU CU . C CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc18 C ND1 HIS 109 C HIS 109 1_555 G CU CU . C CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6NFQ _atom_sites.fract_transf_matrix[1][1] 0.012865 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008983 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012162 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 CU A 1 201 201 CU CU . E 3 YT3 A 1 202 301 YT3 YT3 . F 2 CU B 1 201 201 CU CU . G 2 CU C 1 201 201 CU CU . H 4 HOH A 1 301 18 HOH HOH . H 4 HOH A 2 302 20 HOH HOH . H 4 HOH A 3 303 73 HOH HOH . H 4 HOH A 4 304 81 HOH HOH . H 4 HOH A 5 305 48 HOH HOH . H 4 HOH A 6 306 19 HOH HOH . H 4 HOH A 7 307 1 HOH HOH . H 4 HOH A 8 308 42 HOH HOH . H 4 HOH A 9 309 30 HOH HOH . H 4 HOH A 10 310 61 HOH HOH . H 4 HOH A 11 311 51 HOH HOH . H 4 HOH A 12 312 5 HOH HOH . H 4 HOH A 13 313 38 HOH HOH . H 4 HOH A 14 314 103 HOH HOH . H 4 HOH A 15 315 74 HOH HOH . H 4 HOH A 16 316 11 HOH HOH . H 4 HOH A 17 317 40 HOH HOH . H 4 HOH A 18 318 34 HOH HOH . H 4 HOH A 19 319 31 HOH HOH . H 4 HOH A 20 320 108 HOH HOH . H 4 HOH A 21 321 46 HOH HOH . H 4 HOH A 22 322 75 HOH HOH . H 4 HOH A 23 323 12 HOH HOH . H 4 HOH A 24 324 96 HOH HOH . H 4 HOH A 25 325 33 HOH HOH . H 4 HOH A 26 326 23 HOH HOH . H 4 HOH A 27 327 52 HOH HOH . H 4 HOH A 28 328 64 HOH HOH . H 4 HOH A 29 329 37 HOH HOH . H 4 HOH A 30 330 99 HOH HOH . H 4 HOH A 31 331 105 HOH HOH . H 4 HOH A 32 332 90 HOH HOH . H 4 HOH A 33 333 82 HOH HOH . H 4 HOH A 34 334 104 HOH HOH . H 4 HOH A 35 335 107 HOH HOH . H 4 HOH A 36 336 47 HOH HOH . I 4 HOH B 1 301 70 HOH HOH . I 4 HOH B 2 302 101 HOH HOH . I 4 HOH B 3 303 9 HOH HOH . I 4 HOH B 4 304 7 HOH HOH . I 4 HOH B 5 305 3 HOH HOH . I 4 HOH B 6 306 6 HOH HOH . I 4 HOH B 7 307 24 HOH HOH . I 4 HOH B 8 308 45 HOH HOH . I 4 HOH B 9 309 21 HOH HOH . I 4 HOH B 10 310 17 HOH HOH . I 4 HOH B 11 311 100 HOH HOH . I 4 HOH B 12 312 10 HOH HOH . I 4 HOH B 13 313 56 HOH HOH . I 4 HOH B 14 314 28 HOH HOH . I 4 HOH B 15 315 26 HOH HOH . I 4 HOH B 16 316 71 HOH HOH . I 4 HOH B 17 317 80 HOH HOH . I 4 HOH B 18 318 106 HOH HOH . I 4 HOH B 19 319 29 HOH HOH . I 4 HOH B 20 320 27 HOH HOH . I 4 HOH B 21 321 55 HOH HOH . I 4 HOH B 22 322 89 HOH HOH . I 4 HOH B 23 323 57 HOH HOH . I 4 HOH B 24 324 79 HOH HOH . I 4 HOH B 25 325 2 HOH HOH . I 4 HOH B 26 326 63 HOH HOH . I 4 HOH B 27 327 94 HOH HOH . I 4 HOH B 28 328 91 HOH HOH . I 4 HOH B 29 329 44 HOH HOH . I 4 HOH B 30 330 53 HOH HOH . I 4 HOH B 31 331 16 HOH HOH . I 4 HOH B 32 332 36 HOH HOH . I 4 HOH B 33 333 102 HOH HOH . I 4 HOH B 34 334 22 HOH HOH . I 4 HOH B 35 335 92 HOH HOH . I 4 HOH B 36 336 60 HOH HOH . J 4 HOH C 1 301 83 HOH HOH . J 4 HOH C 2 302 84 HOH HOH . J 4 HOH C 3 303 72 HOH HOH . J 4 HOH C 4 304 65 HOH HOH . J 4 HOH C 5 305 14 HOH HOH . J 4 HOH C 6 306 4 HOH HOH . J 4 HOH C 7 307 76 HOH HOH . J 4 HOH C 8 308 39 HOH HOH . J 4 HOH C 9 309 59 HOH HOH . J 4 HOH C 10 310 41 HOH HOH . J 4 HOH C 11 311 58 HOH HOH . J 4 HOH C 12 312 50 HOH HOH . J 4 HOH C 13 313 69 HOH HOH . J 4 HOH C 14 314 8 HOH HOH . J 4 HOH C 15 315 32 HOH HOH . J 4 HOH C 16 316 77 HOH HOH . J 4 HOH C 17 317 43 HOH HOH . J 4 HOH C 18 318 87 HOH HOH . J 4 HOH C 19 319 54 HOH HOH . J 4 HOH C 20 320 98 HOH HOH . J 4 HOH C 21 321 97 HOH HOH . J 4 HOH C 22 322 35 HOH HOH . J 4 HOH C 23 323 93 HOH HOH . J 4 HOH C 24 324 95 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 9.472 _atom_site.Cartn_y 2.228 _atom_site.Cartn_z 1.967 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.44 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #