data_6NGN # _model_server_result.job_id eZIbUMoV5q4oDdCqF6n13w _model_server_result.datetime_utc '2024-11-23 23:06:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ngn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":804}' # _entry.id 6NGN # _exptl.entry_id 6NGN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6NGN _cell.length_a 52.212 _cell.length_b 111.859 _cell.length_c 165.019 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NGN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 30 A CYS 326 1_555 K ZN ZN . B ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc2 A SG CYS 35 A CYS 331 1_555 K ZN ZN . B ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc3 A SG CYS 119 A CYS 415 1_555 C FE HEM . A HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc4 B SG CYS 30 B CYS 326 1_555 K ZN ZN . B ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc5 B SG CYS 35 B CYS 331 1_555 K ZN ZN . B ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc6 B SG CYS 119 B CYS 415 1_555 G FE HEM . B HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 6NGN _atom_sites.fract_transf_matrix[1][1] 0.019153 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00894 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00606 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 801 750 HEM HEM . D 3 H4B A 1 802 760 H4B BH4 . E 4 KL4 A 1 803 800 KL4 9H1 . F 5 ACT A 1 804 860 ACT ACT . G 2 HEM B 1 801 750 HEM HEM . H 3 H4B B 1 802 760 H4B BH4 . I 4 KL4 B 1 803 800 KL4 9H1 . J 5 ACT B 1 804 860 ACT ACT . K 6 ZN B 1 805 900 ZN ZN . L 7 HOH A 1 901 175 HOH HOH . L 7 HOH A 2 902 188 HOH HOH . L 7 HOH A 3 903 135 HOH HOH . L 7 HOH A 4 904 187 HOH HOH . L 7 HOH A 5 905 184 HOH HOH . L 7 HOH A 6 906 95 HOH HOH . L 7 HOH A 7 907 157 HOH HOH . L 7 HOH A 8 908 75 HOH HOH . L 7 HOH A 9 909 41 HOH HOH . L 7 HOH A 10 910 90 HOH HOH . L 7 HOH A 11 911 28 HOH HOH . L 7 HOH A 12 912 170 HOH HOH . L 7 HOH A 13 913 177 HOH HOH . L 7 HOH A 14 914 134 HOH HOH . L 7 HOH A 15 915 31 HOH HOH . L 7 HOH A 16 916 59 HOH HOH . L 7 HOH A 17 917 167 HOH HOH . L 7 HOH A 18 918 144 HOH HOH . L 7 HOH A 19 919 44 HOH HOH . L 7 HOH A 20 920 43 HOH HOH . L 7 HOH A 21 921 108 HOH HOH . L 7 HOH A 22 922 151 HOH HOH . L 7 HOH A 23 923 162 HOH HOH . L 7 HOH A 24 924 153 HOH HOH . L 7 HOH A 25 925 156 HOH HOH . L 7 HOH A 26 926 49 HOH HOH . L 7 HOH A 27 927 166 HOH HOH . L 7 HOH A 28 928 171 HOH HOH . L 7 HOH A 29 929 62 HOH HOH . L 7 HOH A 30 930 125 HOH HOH . L 7 HOH A 31 931 147 HOH HOH . L 7 HOH A 32 932 179 HOH HOH . L 7 HOH A 33 933 193 HOH HOH . L 7 HOH A 34 934 165 HOH HOH . L 7 HOH A 35 935 150 HOH HOH . L 7 HOH A 36 936 148 HOH HOH . L 7 HOH A 37 937 82 HOH HOH . L 7 HOH A 38 938 98 HOH HOH . L 7 HOH A 39 939 83 HOH HOH . L 7 HOH A 40 940 145 HOH HOH . L 7 HOH A 41 941 11 HOH HOH . L 7 HOH A 42 942 176 HOH HOH . L 7 HOH A 43 943 154 HOH HOH . L 7 HOH A 44 944 47 HOH HOH . L 7 HOH A 45 945 7 HOH HOH . L 7 HOH A 46 946 79 HOH HOH . L 7 HOH A 47 947 68 HOH HOH . L 7 HOH A 48 948 35 HOH HOH . L 7 HOH A 49 949 66 HOH HOH . L 7 HOH A 50 950 194 HOH HOH . L 7 HOH A 51 951 94 HOH HOH . L 7 HOH A 52 952 192 HOH HOH . L 7 HOH A 53 953 158 HOH HOH . L 7 HOH A 54 954 10 HOH HOH . L 7 HOH A 55 955 182 HOH HOH . L 7 HOH A 56 956 54 HOH HOH . L 7 HOH A 57 957 174 HOH HOH . L 7 HOH A 58 958 251 HOH HOH . L 7 HOH A 59 959 173 HOH HOH . L 7 HOH A 60 960 107 HOH HOH . L 7 HOH A 61 961 17 HOH HOH . L 7 HOH A 62 962 137 HOH HOH . L 7 HOH A 63 963 155 HOH HOH . L 7 HOH A 64 964 178 HOH HOH . L 7 HOH A 65 965 51 HOH HOH . L 7 HOH A 66 966 197 HOH HOH . L 7 HOH A 67 967 168 HOH HOH . L 7 HOH A 68 968 132 HOH HOH . L 7 HOH A 69 969 172 HOH HOH . L 7 HOH A 70 970 64 HOH HOH . L 7 HOH A 71 971 180 HOH HOH . L 7 HOH A 72 972 71 HOH HOH . L 7 HOH A 73 973 103 HOH HOH . L 7 HOH A 74 974 53 HOH HOH . L 7 HOH A 75 975 133 HOH HOH . L 7 HOH A 76 976 36 HOH HOH . L 7 HOH A 77 977 183 HOH HOH . L 7 HOH A 78 978 80 HOH HOH . L 7 HOH A 79 979 63 HOH HOH . L 7 HOH A 80 980 32 HOH HOH . L 7 HOH A 81 981 181 HOH HOH . L 7 HOH A 82 982 57 HOH HOH . L 7 HOH A 83 983 129 HOH HOH . L 7 HOH A 84 984 50 HOH HOH . L 7 HOH A 85 985 72 HOH HOH . L 7 HOH A 86 986 33 HOH HOH . L 7 HOH A 87 987 149 HOH HOH . L 7 HOH A 88 988 186 HOH HOH . L 7 HOH A 89 989 87 HOH HOH . L 7 HOH A 90 990 152 HOH HOH . L 7 HOH A 91 991 48 HOH HOH . L 7 HOH A 92 992 130 HOH HOH . L 7 HOH A 93 993 84 HOH HOH . L 7 HOH A 94 994 60 HOH HOH . L 7 HOH A 95 995 104 HOH HOH . L 7 HOH A 96 996 161 HOH HOH . L 7 HOH A 97 997 185 HOH HOH . L 7 HOH A 98 998 196 HOH HOH . L 7 HOH A 99 999 191 HOH HOH . L 7 HOH A 100 1000 131 HOH HOH . L 7 HOH A 101 1001 163 HOH HOH . L 7 HOH A 102 1002 169 HOH HOH . L 7 HOH A 103 1003 195 HOH HOH . L 7 HOH A 104 1004 160 HOH HOH . L 7 HOH A 105 1005 138 HOH HOH . L 7 HOH A 106 1006 164 HOH HOH . L 7 HOH A 107 1007 159 HOH HOH . L 7 HOH A 108 1008 243 HOH HOH . L 7 HOH A 109 1009 189 HOH HOH . L 7 HOH A 110 1010 190 HOH HOH . M 7 HOH B 1 901 202 HOH HOH . M 7 HOH B 2 902 215 HOH HOH . M 7 HOH B 3 903 146 HOH HOH . M 7 HOH B 4 904 247 HOH HOH . M 7 HOH B 5 905 112 HOH HOH . M 7 HOH B 6 906 113 HOH HOH . M 7 HOH B 7 907 244 HOH HOH . M 7 HOH B 8 908 139 HOH HOH . M 7 HOH B 9 909 110 HOH HOH . M 7 HOH B 10 910 116 HOH HOH . M 7 HOH B 11 911 232 HOH HOH . M 7 HOH B 12 912 200 HOH HOH . M 7 HOH B 13 913 127 HOH HOH . M 7 HOH B 14 914 69 HOH HOH . M 7 HOH B 15 915 52 HOH HOH . M 7 HOH B 16 916 224 HOH HOH . M 7 HOH B 17 917 201 HOH HOH . M 7 HOH B 18 918 1 HOH HOH . M 7 HOH B 19 919 209 HOH HOH . M 7 HOH B 20 920 204 HOH HOH . M 7 HOH B 21 921 2 HOH HOH . M 7 HOH B 22 922 128 HOH HOH . M 7 HOH B 23 923 42 HOH HOH . M 7 HOH B 24 924 120 HOH HOH . M 7 HOH B 25 925 18 HOH HOH . M 7 HOH B 26 926 88 HOH HOH . M 7 HOH B 27 927 23 HOH HOH . M 7 HOH B 28 928 142 HOH HOH . M 7 HOH B 29 929 29 HOH HOH . M 7 HOH B 30 930 238 HOH HOH . M 7 HOH B 31 931 26 HOH HOH . M 7 HOH B 32 932 140 HOH HOH . M 7 HOH B 33 933 136 HOH HOH . M 7 HOH B 34 934 15 HOH HOH . M 7 HOH B 35 935 237 HOH HOH . M 7 HOH B 36 936 13 HOH HOH . M 7 HOH B 37 937 211 HOH HOH . M 7 HOH B 38 938 58 HOH HOH . M 7 HOH B 39 939 8 HOH HOH . M 7 HOH B 40 940 89 HOH HOH . M 7 HOH B 41 941 40 HOH HOH . M 7 HOH B 42 942 76 HOH HOH . M 7 HOH B 43 943 55 HOH HOH . M 7 HOH B 44 944 229 HOH HOH . M 7 HOH B 45 945 96 HOH HOH . M 7 HOH B 46 946 5 HOH HOH . M 7 HOH B 47 947 114 HOH HOH . M 7 HOH B 48 948 207 HOH HOH . M 7 HOH B 49 949 246 HOH HOH . M 7 HOH B 50 950 93 HOH HOH . M 7 HOH B 51 951 118 HOH HOH . M 7 HOH B 52 952 19 HOH HOH . M 7 HOH B 53 953 231 HOH HOH . M 7 HOH B 54 954 86 HOH HOH . M 7 HOH B 55 955 25 HOH HOH . M 7 HOH B 56 956 24 HOH HOH . M 7 HOH B 57 957 85 HOH HOH . M 7 HOH B 58 958 141 HOH HOH . M 7 HOH B 59 959 4 HOH HOH . M 7 HOH B 60 960 225 HOH HOH . M 7 HOH B 61 961 77 HOH HOH . M 7 HOH B 62 962 6 HOH HOH . M 7 HOH B 63 963 78 HOH HOH . M 7 HOH B 64 964 20 HOH HOH . M 7 HOH B 65 965 253 HOH HOH . M 7 HOH B 66 966 37 HOH HOH . M 7 HOH B 67 967 92 HOH HOH . M 7 HOH B 68 968 106 HOH HOH . M 7 HOH B 69 969 123 HOH HOH . M 7 HOH B 70 970 21 HOH HOH . M 7 HOH B 71 971 210 HOH HOH . M 7 HOH B 72 972 228 HOH HOH . M 7 HOH B 73 973 91 HOH HOH . M 7 HOH B 74 974 119 HOH HOH . M 7 HOH B 75 975 38 HOH HOH . M 7 HOH B 76 976 56 HOH HOH . M 7 HOH B 77 977 12 HOH HOH . M 7 HOH B 78 978 198 HOH HOH . M 7 HOH B 79 979 46 HOH HOH . M 7 HOH B 80 980 65 HOH HOH . M 7 HOH B 81 981 126 HOH HOH . M 7 HOH B 82 982 235 HOH HOH . M 7 HOH B 83 983 249 HOH HOH . M 7 HOH B 84 984 256 HOH HOH . M 7 HOH B 85 985 73 HOH HOH . M 7 HOH B 86 986 248 HOH HOH . M 7 HOH B 87 987 22 HOH HOH . M 7 HOH B 88 988 34 HOH HOH . M 7 HOH B 89 989 234 HOH HOH . M 7 HOH B 90 990 245 HOH HOH . M 7 HOH B 91 991 97 HOH HOH . M 7 HOH B 92 992 30 HOH HOH . M 7 HOH B 93 993 124 HOH HOH . M 7 HOH B 94 994 236 HOH HOH . M 7 HOH B 95 995 105 HOH HOH . M 7 HOH B 96 996 74 HOH HOH . M 7 HOH B 97 997 14 HOH HOH . M 7 HOH B 98 998 252 HOH HOH . M 7 HOH B 99 999 39 HOH HOH . M 7 HOH B 100 1000 27 HOH HOH . M 7 HOH B 101 1001 16 HOH HOH . M 7 HOH B 102 1002 101 HOH HOH . M 7 HOH B 103 1003 226 HOH HOH . M 7 HOH B 104 1004 3 HOH HOH . M 7 HOH B 105 1005 45 HOH HOH . M 7 HOH B 106 1006 67 HOH HOH . M 7 HOH B 107 1007 214 HOH HOH . M 7 HOH B 108 1008 199 HOH HOH . M 7 HOH B 109 1009 203 HOH HOH . M 7 HOH B 110 1010 117 HOH HOH . M 7 HOH B 111 1011 208 HOH HOH . M 7 HOH B 112 1012 99 HOH HOH . M 7 HOH B 113 1013 223 HOH HOH . M 7 HOH B 114 1014 230 HOH HOH . M 7 HOH B 115 1015 122 HOH HOH . M 7 HOH B 116 1016 109 HOH HOH . M 7 HOH B 117 1017 70 HOH HOH . M 7 HOH B 118 1018 221 HOH HOH . M 7 HOH B 119 1019 206 HOH HOH . M 7 HOH B 120 1020 233 HOH HOH . M 7 HOH B 121 1021 9 HOH HOH . M 7 HOH B 122 1022 240 HOH HOH . M 7 HOH B 123 1023 218 HOH HOH . M 7 HOH B 124 1024 239 HOH HOH . M 7 HOH B 125 1025 111 HOH HOH . M 7 HOH B 126 1026 81 HOH HOH . M 7 HOH B 127 1027 61 HOH HOH . M 7 HOH B 128 1028 115 HOH HOH . M 7 HOH B 129 1029 227 HOH HOH . M 7 HOH B 130 1030 216 HOH HOH . M 7 HOH B 131 1031 213 HOH HOH . M 7 HOH B 132 1032 241 HOH HOH . M 7 HOH B 133 1033 242 HOH HOH . M 7 HOH B 134 1034 102 HOH HOH . M 7 HOH B 135 1035 254 HOH HOH . M 7 HOH B 136 1036 143 HOH HOH . M 7 HOH B 137 1037 121 HOH HOH . M 7 HOH B 138 1038 205 HOH HOH . M 7 HOH B 139 1039 255 HOH HOH . M 7 HOH B 140 1040 220 HOH HOH . M 7 HOH B 141 1041 219 HOH HOH . M 7 HOH B 142 1042 100 HOH HOH . M 7 HOH B 143 1043 212 HOH HOH . M 7 HOH B 144 1044 217 HOH HOH . M 7 HOH B 145 1045 222 HOH HOH . M 7 HOH B 146 1046 250 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . J 5 2.941 -5.043 56.798 1 90.66 ? C ACT 804 B 1 HETATM 2 O O ACT . . . J 5 2.686 -6.021 56.054 1 98.78 ? O ACT 804 B 1 HETATM 3 O OXT ACT . . . J 5 3.515 -5.16 57.909 1 74.31 ? OXT ACT 804 B 1 HETATM 4 C CH3 ACT . . . J 5 2.716 -3.669 56.245 1 95.5 ? CH3 ACT 804 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #