data_6NHG # _model_server_result.job_id 47TVXLo8925bTEDo9C3TBw _model_server_result.datetime_utc '2024-11-23 11:51:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6nhg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":1001}' # _entry.id 6NHG # _exptl.entry_id 6NHG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 175.82 _entity.id 18 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE2/S2 (INORGANIC) CLUSTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6NHG _cell.length_a 154.181 _cell.length_b 154.181 _cell.length_c 598.18 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NHG _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 22-meric _pdbx_struct_assembly.oligomeric_count 22 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 154.181 154.181 0 # _struct_asym.details ? _struct_asym.entity_id 18 _struct_asym.id T _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 144 E CYS 144 1_555 E SG CYS 160 E CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 H SG CYS 24 H CYS 24 1_555 H SG CYS 68 H CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 H SG CYS 40 H CYS 40 1_555 H SG CYS 54 H CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 D SG CYS 37 D CYS 37 1_555 R CAB HEC . D HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.798 ? covale ? covale2 D SG CYS 40 D CYS 40 1_555 R CAC HEC . D HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.859 ? metalc ? metalc1 C NE2 HIS 83 C HIS 83 1_555 N FE HEM . C HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc2 C NE2 HIS 97 C HIS 97 1_555 O FE HEM . C HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc3 C NE2 HIS 182 C HIS 182 1_555 N FE HEM . C HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc4 C NE2 HIS 196 C HIS 196 1_555 O FE HEM . C HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc5 D NE2 HIS 41 D HIS 41 1_555 R FE HEC . D HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc6 D SD MET 160 D MET 160 1_555 R FE HEC . D HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc7 E SG CYS 139 E CYS 139 1_555 T FE1 FES . E FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc8 E ND1 HIS 141 E HIS 141 1_555 T FE2 FES . E FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc9 E SG CYS 158 E CYS 158 1_555 T FE1 FES . E FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc10 E ND1 HIS 161 E HIS 161 1_555 T FE2 FES . E FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? # _chem_comp.formula 'Fe2 S2' _chem_comp.formula_weight 175.82 _chem_comp.id FES _chem_comp.mon_nstd_flag . _chem_comp.name 'FE2/S2 (INORGANIC) CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S1 FES sing 566 n n FE1 S2 FES sing 567 n n FE2 S1 FES sing 568 n n FE2 S2 FES sing 569 n n # _atom_sites.entry_id 6NHG _atom_sites.fract_transf_matrix[1][1] 0.006486 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006486 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.001672 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code L 12 6PE A 1 501 2 6PE 6PE . M 13 CDL A 1 502 8 CDL CDL . N 14 HEM C 1 1001 1001 HEM HEM . O 14 HEM C 1 1002 1002 HEM HEM . P 15 AZO C 1 1003 1101 AZO AZO . Q 16 8PE C 1 1004 3 8PE 8PE . R 17 HEC D 1 1001 1001 HEC HEC . S 13 CDL D 1 1002 7 CDL CDL . T 18 FES E 1 1001 1001 FES FES . U 13 CDL G 1 101 6 CDL CDL . V 19 MC3 J 1 101 5 MC3 PX4 . W 12 6PE K 1 101 1 6PE 6PE . X 20 HOH A 1 601 1 HOH HOH . Y 20 HOH B 1 501 22 HOH HOH . Y 20 HOH B 2 502 2 HOH HOH . Y 20 HOH B 3 503 15 HOH HOH . Y 20 HOH B 4 504 9 HOH HOH . Y 20 HOH B 5 505 11 HOH HOH . Y 20 HOH B 6 506 4 HOH HOH . Y 20 HOH B 7 507 21 HOH HOH . Y 20 HOH B 8 508 10 HOH HOH . Y 20 HOH B 9 509 24 HOH HOH . Y 20 HOH B 10 510 16 HOH HOH . Y 20 HOH B 11 511 14 HOH HOH . Y 20 HOH B 12 512 20 HOH HOH . Y 20 HOH B 13 513 17 HOH HOH . Y 20 HOH B 14 514 12 HOH HOH . Y 20 HOH B 15 515 3 HOH HOH . Y 20 HOH B 16 516 23 HOH HOH . Y 20 HOH B 17 517 5 HOH HOH . Y 20 HOH B 18 518 8 HOH HOH . Y 20 HOH B 19 519 18 HOH HOH . Y 20 HOH B 20 520 7 HOH HOH . Y 20 HOH B 21 521 13 HOH HOH . Y 20 HOH B 22 522 6 HOH HOH . Y 20 HOH B 23 523 19 HOH HOH . Z 20 HOH C 1 1101 25 HOH HOH . AA 20 HOH F 1 201 26 HOH HOH . AA 20 HOH F 2 202 30 HOH HOH . AA 20 HOH F 3 203 28 HOH HOH . AA 20 HOH F 4 204 32 HOH HOH . AA 20 HOH F 5 205 27 HOH HOH . AA 20 HOH F 6 206 31 HOH HOH . BA 20 HOH G 1 201 33 HOH HOH . BA 20 HOH G 2 202 29 HOH HOH . CA 20 HOH I 1 101 34 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 FES . . . T 18 73.351 44.769 179.95 0.25 75.83 ? FE1 FES 1001 E 1 HETATM 2 FE FE2 FES . . . T 18 71.829 44.131 177.361 0.25 76.86 ? FE2 FES 1001 E 1 HETATM 3 S S1 FES . . . T 18 72.27 43.012 179.198 0.25 76.65 ? S1 FES 1001 E 1 HETATM 4 S S2 FES . . . T 18 72.694 45.956 178.223 0.25 76.1 ? S2 FES 1001 E 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 67 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #