data_6NIN # _model_server_result.job_id 1gJz3s7-Z7x98SsLDc8A0A _model_server_result.datetime_utc '2024-10-15 11:24:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6nin # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"QA","auth_seq_id":1002}' # _entry.id 6NIN # _exptl.entry_id 6NIN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 616.487 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.97 _cell.angle_gamma 90 _cell.entry_id 6NIN _cell.length_a 356.661 _cell.length_b 145.752 _cell.length_c 162.223 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NIN _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA hexameric 6 author_and_software_defined_assembly 1 PISA hexameric 6 author_and_software_defined_assembly 2 PISA hexameric 6 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA 1 1 G,H,I,J,K,L,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA 2 1 M,N,O,P,Q,R,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 S N N ? 4 T N N ? 4 AA N N ? 4 BA N N ? 4 IA N N ? 4 JA N N ? 4 PA N N ? 4 QA N N ? 4 WA N N ? 4 XA N N ? 4 DB N N ? 4 EB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 185 A CYS 185 1_555 F SG CYS 70 G CYS 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 145 B CYS 145 1_555 B SG CYS 169 B CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf3 C SG CYS 70 C CYS 70 1_555 D SG CYS 185 E CYS 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 C SG CYS 134 C CYS 134 1_555 C SG CYS 151 C CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 E SG CYS 145 F CYS 145 1_555 E SG CYS 169 F CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf6 F SG CYS 134 G CYS 134 1_555 F SG CYS 151 G CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf7 G SG CYS 185 K CYS 185 1_555 L SG CYS 70 Q CYS 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf8 H SG CYS 145 L CYS 145 1_555 H SG CYS 169 L CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf9 I SG CYS 70 M CYS 70 1_555 J SG CYS 185 O CYS 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf10 I SG CYS 134 M CYS 134 1_555 I SG CYS 151 M CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf11 K SG CYS 145 P CYS 145 1_555 K SG CYS 169 P CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf12 L SG CYS 134 Q CYS 134 1_555 L SG CYS 151 Q CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf13 M SG CYS 185 S CYS 185 1_555 R SG CYS 70 Y CYS 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf14 N SG CYS 145 T CYS 145 1_555 N SG CYS 169 T CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf15 O SG CYS 70 U CYS 70 1_555 P SG CYS 185 W CYS 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf16 O SG CYS 134 U CYS 134 1_555 O SG CYS 151 U CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf17 Q SG CYS 145 X CYS 145 1_555 Q SG CYS 169 X CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf18 R SG CYS 134 Y CYS 134 1_555 R SG CYS 151 Y CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 B SG CYS 36 B CYS 36 1_555 W CAB HEC . B HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.812 ? covale ? covale2 B SG CYS 39 B CYS 39 1_555 W CAC HEC . B HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.914 ? covale ? covale3 E SG CYS 36 F CYS 36 1_555 EA CAB HEC . F HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.789 ? covale ? covale4 E SG CYS 39 F CYS 39 1_555 EA CAC HEC . F HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.892 ? covale ? covale5 H SG CYS 36 L CYS 36 1_555 LA CAB HEC . L HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.785 ? covale ? covale6 H SG CYS 39 L CYS 39 1_555 LA CAC HEC . L HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.894 ? covale ? covale7 K SG CYS 36 P CYS 36 1_555 SA CAB HEC . P HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale8 K SG CYS 39 P CYS 39 1_555 SA CAC HEC . P HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.898 ? covale ? covale9 N SG CYS 36 T CYS 36 1_555 ZA CAB HEC . T HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.799 ? covale ? covale10 N SG CYS 39 T CYS 39 1_555 ZA CAC HEC . T HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.867 ? covale ? covale11 Q SG CYS 36 X CYS 36 1_555 HB CAB HEC . X HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.774 ? covale ? covale12 Q SG CYS 39 X CYS 39 1_555 HB CAC HEC . X HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.869 ? metalc ? metalc1 A NE2 HIS 97 A HIS 97 1_555 T FE HEM . A HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc2 A NE2 HIS 111 A HIS 111 1_555 S FE HEM . A HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc3 A NE2 HIS 198 A HIS 198 1_555 T FE HEM . A HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc4 A NE2 HIS 212 A HIS 212 1_555 S FE HEM . A HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc5 B OD1 ASP 8 B ASP 8 1_555 X SR SR . B SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? metalc ? metalc6 B O VAL 9 B VAL 9 1_555 X SR SR . B SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc7 B OE1 GLU 14 B GLU 14 1_555 X SR SR . B SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? metalc ? metalc8 B OE2 GLU 14 B GLU 14 1_555 X SR SR . B SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.693 ? metalc ? metalc9 B NE2 HIS 40 B HIS 40 1_555 W FE HEC . B HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc10 B OE2 GLU 129 B GLU 129 1_555 X SR SR . B SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? metalc ? metalc11 B SD MET 185 B MET 185 1_555 W FE HEC . B HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc12 C SG CYS 129 C CYS 129 1_555 Z FE1 FES . C FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc13 C ND1 HIS 131 C HIS 131 1_555 Z FE2 FES . C FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc14 C SG CYS 149 C CYS 149 1_555 Z FE1 FES . C FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc15 C ND1 HIS 152 C HIS 152 1_555 Z FE2 FES . C FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc16 D NE2 HIS 97 E HIS 97 1_555 BA FE HEM . E HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc17 D NE2 HIS 111 E HIS 111 1_555 AA FE HEM . E HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc18 D NE2 HIS 198 E HIS 198 1_555 BA FE HEM . E HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc19 D NE2 HIS 212 E HIS 212 1_555 AA FE HEM . E HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc20 E OD1 ASP 8 F ASP 8 1_555 GA SR SR . F SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? metalc ? metalc21 E O VAL 9 F VAL 9 1_555 GA SR SR . F SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.727 ? metalc ? metalc22 E OE1 GLU 14 F GLU 14 1_555 GA SR SR . F SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc23 E OE2 GLU 14 F GLU 14 1_555 GA SR SR . F SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc24 E NE2 HIS 40 F HIS 40 1_555 EA FE HEC . F HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? metalc ? metalc25 E OE2 GLU 129 F GLU 129 1_555 GA SR SR . F SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? metalc ? metalc26 E SD MET 185 F MET 185 1_555 EA FE HEC . F HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc27 F SG CYS 129 G CYS 129 1_555 HA FE1 FES . G FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc28 F ND1 HIS 131 G HIS 131 1_555 HA FE2 FES . G FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc29 F SG CYS 149 G CYS 149 1_555 HA FE1 FES . G FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc30 F ND1 HIS 152 G HIS 152 1_555 HA FE2 FES . G FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc31 G NE2 HIS 97 K HIS 97 1_555 JA FE HEM . K HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc32 G NE2 HIS 111 K HIS 111 1_555 IA FE HEM . K HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc33 G NE2 HIS 198 K HIS 198 1_555 JA FE HEM . K HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc34 G NE2 HIS 212 K HIS 212 1_555 IA FE HEM . K HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc35 H OD1 ASP 8 L ASP 8 1_555 MA SR SR . L SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? metalc ? metalc36 H O VAL 9 L VAL 9 1_555 MA SR SR . L SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.629 ? metalc ? metalc37 H OE1 GLU 14 L GLU 14 1_555 MA SR SR . L SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.701 ? metalc ? metalc38 H OE2 GLU 14 L GLU 14 1_555 MA SR SR . L SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.652 ? metalc ? metalc39 H NE2 HIS 40 L HIS 40 1_555 LA FE HEC . L HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? metalc ? metalc40 H OE2 GLU 129 L GLU 129 1_555 MA SR SR . L SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.706 ? metalc ? metalc41 H SD MET 185 L MET 185 1_555 LA FE HEC . L HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc42 I SG CYS 129 M CYS 129 1_555 OA FE1 FES . M FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc43 I ND1 HIS 131 M HIS 131 1_555 OA FE2 FES . M FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc44 I SG CYS 149 M CYS 149 1_555 OA FE1 FES . M FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc45 I ND1 HIS 152 M HIS 152 1_555 OA FE2 FES . M FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc46 J NE2 HIS 97 O HIS 97 1_555 QA FE HEM . O HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc47 J NE2 HIS 111 O HIS 111 1_555 PA FE HEM . O HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc48 J NE2 HIS 198 O HIS 198 1_555 QA FE HEM . O HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc49 J NE2 HIS 212 O HIS 212 1_555 PA FE HEM . O HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc50 K OD1 ASP 8 P ASP 8 1_555 UA SR SR . P SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? metalc ? metalc51 K O VAL 9 P VAL 9 1_555 UA SR SR . P SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.708 ? metalc ? metalc52 K OE1 GLU 14 P GLU 14 1_555 UA SR SR . P SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.603 ? metalc ? metalc53 K OE2 GLU 14 P GLU 14 1_555 UA SR SR . P SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? metalc ? metalc54 K NE2 HIS 40 P HIS 40 1_555 SA FE HEC . P HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc55 K OE2 GLU 129 P GLU 129 1_555 UA SR SR . P SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? metalc ? metalc56 K SD MET 185 P MET 185 1_555 SA FE HEC . P HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc57 L SG CYS 129 Q CYS 129 1_555 VA FE1 FES . Q FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc58 L ND1 HIS 131 Q HIS 131 1_555 VA FE2 FES . Q FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc59 L SG CYS 149 Q CYS 149 1_555 VA FE1 FES . Q FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc60 L ND1 HIS 152 Q HIS 152 1_555 VA FE2 FES . Q FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc61 M NE2 HIS 97 S HIS 97 1_555 XA FE HEM . S HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc62 M NE2 HIS 111 S HIS 111 1_555 WA FE HEM . S HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc63 M NE2 HIS 198 S HIS 198 1_555 XA FE HEM . S HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc64 M NE2 HIS 212 S HIS 212 1_555 WA FE HEM . S HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc65 N OD1 ASP 8 T ASP 8 1_555 AB SR SR . T SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? metalc ? metalc66 N O VAL 9 T VAL 9 1_555 AB SR SR . T SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? metalc ? metalc67 N OE1 GLU 14 T GLU 14 1_555 AB SR SR . T SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.674 ? metalc ? metalc68 N OE2 GLU 14 T GLU 14 1_555 AB SR SR . T SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.675 ? metalc ? metalc69 N NE2 HIS 40 T HIS 40 1_555 ZA FE HEC . T HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc70 N OE2 GLU 129 T GLU 129 1_555 AB SR SR . T SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc71 N SD MET 185 T MET 185 1_555 ZA FE HEC . T HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? metalc ? metalc72 O SG CYS 129 U CYS 129 1_555 CB FE1 FES . U FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc73 O ND1 HIS 131 U HIS 131 1_555 CB FE2 FES . U FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc74 O SG CYS 149 U CYS 149 1_555 CB FE1 FES . U FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc75 O ND1 HIS 152 U HIS 152 1_555 CB FE2 FES . U FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc76 P NE2 HIS 97 W HIS 97 1_555 EB FE HEM . W HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc77 P NE2 HIS 111 W HIS 111 1_555 DB FE HEM . W HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc78 P NE2 HIS 198 W HIS 198 1_555 EB FE HEM . W HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc79 P NE2 HIS 212 W HIS 212 1_555 DB FE HEM . W HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc80 Q OD1 ASP 8 X ASP 8 1_555 IB SR SR . X SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? metalc ? metalc81 Q O VAL 9 X VAL 9 1_555 IB SR SR . X SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? metalc ? metalc82 Q OE1 GLU 14 X GLU 14 1_555 IB SR SR . X SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? metalc ? metalc83 Q OE2 GLU 14 X GLU 14 1_555 IB SR SR . X SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc84 Q NE2 HIS 40 X HIS 40 1_555 HB FE HEC . X HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc85 Q OE2 GLU 129 X GLU 129 1_555 IB SR SR . X SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.674 ? metalc ? metalc86 Q SD MET 185 X MET 185 1_555 HB FE HEC . X HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc87 R SG CYS 129 Y CYS 129 1_555 KB FE1 FES . Y FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc88 R ND1 HIS 131 Y HIS 131 1_555 KB FE2 FES . Y FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc89 R SG CYS 149 Y CYS 149 1_555 KB FE1 FES . Y FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc90 R ND1 HIS 152 Y HIS 152 1_555 KB FE2 FES . Y FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 324 n n CHA C4D HEM doub 325 n n CHA HHA HEM sing 326 n n CHB C4A HEM sing 327 n n CHB C1B HEM doub 328 n n CHB HHB HEM sing 329 n n CHC C4B HEM sing 330 n n CHC C1C HEM doub 331 n n CHC HHC HEM sing 332 n n CHD C4C HEM doub 333 n n CHD C1D HEM sing 334 n n CHD HHD HEM sing 335 n n C1A C2A HEM doub 336 n y C1A NA HEM sing 337 n y C2A C3A HEM sing 338 n y C2A CAA HEM sing 339 n n C3A C4A HEM doub 340 n y C3A CMA HEM sing 341 n n C4A NA HEM sing 342 n y CMA HMA HEM sing 343 n n CMA HMAA HEM sing 344 n n CMA HMAB HEM sing 345 n n CAA CBA HEM sing 346 n n CAA HAA HEM sing 347 n n CAA HAAA HEM sing 348 n n CBA CGA HEM sing 349 n n CBA HBA HEM sing 350 n n CBA HBAA HEM sing 351 n n CGA O1A HEM doub 352 n n CGA O2A HEM sing 353 n n C1B C2B HEM sing 354 n n C1B NB HEM sing 355 n n C2B C3B HEM doub 356 n n C2B CMB HEM sing 357 n n C3B C4B HEM sing 358 n n C3B CAB HEM sing 359 n n C4B NB HEM doub 360 n n CMB HMB HEM sing 361 n n CMB HMBA HEM sing 362 n n CMB HMBB HEM sing 363 n n CAB CBB HEM doub 364 n n CAB HAB HEM sing 365 n n CBB HBB HEM sing 366 n n CBB HBBA HEM sing 367 n n C1C C2C HEM sing 368 n y C1C NC HEM sing 369 n y C2C C3C HEM doub 370 n y C2C CMC HEM sing 371 n n C3C C4C HEM sing 372 n y C3C CAC HEM sing 373 n n C4C NC HEM sing 374 n y CMC HMC HEM sing 375 n n CMC HMCA HEM sing 376 n n CMC HMCB HEM sing 377 n n CAC CBC HEM doub 378 n n CAC HAC HEM sing 379 n n CBC HBC HEM sing 380 n n CBC HBCA HEM sing 381 n n C1D C2D HEM sing 382 n n C1D ND HEM doub 383 n n C2D C3D HEM doub 384 n n C2D CMD HEM sing 385 n n C3D C4D HEM sing 386 n n C3D CAD HEM sing 387 n n C4D ND HEM sing 388 n n CMD HMD HEM sing 389 n n CMD HMDA HEM sing 390 n n CMD HMDB HEM sing 391 n n CAD CBD HEM sing 392 n n CAD HAD HEM sing 393 n n CAD HADA HEM sing 394 n n CBD CGD HEM sing 395 n n CBD HBD HEM sing 396 n n CBD HBDA HEM sing 397 n n CGD O1D HEM doub 398 n n CGD O2D HEM sing 399 n n O2A H2A HEM sing 400 n n O2D H2D HEM sing 401 n n FE NA HEM sing 402 n n FE NB HEM sing 403 n n FE NC HEM sing 404 n n FE ND HEM sing 405 n n # _atom_sites.entry_id 6NIN _atom_sites.fract_transf_matrix[1][1] 0.002804 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00075 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006861 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006381 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code S 4 HEM A 1 1001 1001 HEM HEM . T 4 HEM A 1 1002 1002 HEM HEM . U 5 SMA A 1 1003 1101 SMA SMA . V 6 6PE A 1 1004 2001 6PE 6PE . W 7 HEC B 1 1001 1001 HEC HEC . X 8 SR B 1 1002 2001 SR SR . Y 9 BOG B 1 1003 2002 BOG BOG . Z 10 FES C 1 1001 1001 FES FES . AA 4 HEM E 1 1001 1001 HEM HEM . BA 4 HEM E 1 1002 1002 HEM HEM . CA 5 SMA E 1 1003 1101 SMA SMA . DA 6 6PE E 1 1004 2001 6PE 6PE . EA 7 HEC F 1 1001 1001 HEC HEC . FA 9 BOG F 1 1002 2002 BOG BOG . GA 8 SR F 1 1003 2001 SR SR . HA 10 FES G 1 1001 1001 FES FES . IA 4 HEM K 1 1001 1001 HEM HEM . JA 4 HEM K 1 1002 1002 HEM HEM . KA 5 SMA K 1 1003 1101 SMA SMA . LA 7 HEC L 1 1001 1001 HEC HEC . MA 8 SR L 1 1002 2001 SR SR . NA 9 BOG L 1 1003 2002 BOG BOG . OA 10 FES M 1 1001 1001 FES FES . PA 4 HEM O 1 1001 1001 HEM HEM . QA 4 HEM O 1 1002 1002 HEM HEM . RA 5 SMA O 1 1003 1101 SMA SMA . SA 7 HEC P 1 1001 1001 HEC HEC . TA 9 BOG P 1 1002 2002 BOG BOG . UA 8 SR P 1 1003 2001 SR SR . VA 10 FES Q 1 1001 1001 FES FES . WA 4 HEM S 1 1001 1001 HEM HEM . XA 4 HEM S 1 1002 1002 HEM HEM . YA 5 SMA S 1 1003 1101 SMA SMA . ZA 7 HEC T 1 1001 1001 HEC HEC . AB 8 SR T 1 1002 2001 SR SR . BB 9 BOG T 1 1003 2002 BOG BOG . CB 10 FES U 1 1001 1001 FES FES . DB 4 HEM W 1 1001 1001 HEM HEM . EB 4 HEM W 1 1002 1002 HEM HEM . FB 5 SMA W 1 1003 1101 SMA SMA . GB 6 6PE W 1 1004 2001 6PE 6PE . HB 7 HEC X 1 1001 1001 HEC HEC . IB 8 SR X 1 1002 2001 SR SR . JB 9 BOG X 1 1003 2002 BOG BOG . KB 10 FES Y 1 1001 1001 FES FES . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . QA 4 29.546 -8.343 92.845 1 93.46 ? CHA HEM 1002 O 1 HETATM 2 C CHB HEM . . . QA 4 25.231 -7.71 90.7 1 94.29 ? CHB HEM 1002 O 1 HETATM 3 C CHC HEM . . . QA 4 25.795 -2.888 90.88 1 81.84 ? CHC HEM 1002 O 1 HETATM 4 C CHD HEM . . . QA 4 30.275 -3.571 92.582 1 84.96 ? CHD HEM 1002 O 1 HETATM 5 C C1A HEM . . . QA 4 28.305 -8.586 92.3 1 92.32 ? C1A HEM 1002 O 1 HETATM 6 C C2A HEM . . . QA 4 27.644 -9.867 92.282 1 92.64 ? C2A HEM 1002 O 1 HETATM 7 C C3A HEM . . . QA 4 26.456 -9.712 91.686 1 97.44 ? C3A HEM 1002 O 1 HETATM 8 C C4A HEM . . . QA 4 26.311 -8.306 91.325 1 94.6 ? C4A HEM 1002 O 1 HETATM 9 C CMA HEM . . . QA 4 25.422 -10.832 91.442 1 103.97 ? CMA HEM 1002 O 1 HETATM 10 C CAA HEM . . . QA 4 28.298 -11.151 92.837 1 92.21 ? CAA HEM 1002 O 1 HETATM 11 C CBA HEM . . . QA 4 28.219 -11.143 94.36 1 94.67 ? CBA HEM 1002 O 1 HETATM 12 C CGA HEM . . . QA 4 28.772 -12.423 94.937 1 98.29 ? CGA HEM 1002 O 1 HETATM 13 O O1A HEM . . . QA 4 29.101 -12.425 96.153 1 93.91 ? O1A HEM 1002 O 1 HETATM 14 O O2A HEM . . . QA 4 28.916 -13.428 94.193 1 104.05 ? O2A HEM 1002 O 1 HETATM 15 C C1B HEM . . . QA 4 24.994 -6.35 90.571 1 90.7 ? C1B HEM 1002 O 1 HETATM 16 C C2B HEM . . . QA 4 23.814 -5.724 89.998 1 91.12 ? C2B HEM 1002 O 1 HETATM 17 C C3B HEM . . . QA 4 23.972 -4.385 90.068 1 86.44 ? C3B HEM 1002 O 1 HETATM 18 C C4B HEM . . . QA 4 25.264 -4.133 90.651 1 82.69 ? C4B HEM 1002 O 1 HETATM 19 C CMB HEM . . . QA 4 22.608 -6.53 89.46 1 93.98 ? CMB HEM 1002 O 1 HETATM 20 C CAB HEM . . . QA 4 23.066 -3.22 89.599 1 91.19 ? CAB HEM 1002 O 1 HETATM 21 C CBB HEM . . . QA 4 22.026 -3.387 88.776 1 99.8 ? CBB HEM 1002 O 1 HETATM 22 C C1C HEM . . . QA 4 27.083 -2.645 91.291 1 83.12 ? C1C HEM 1002 O 1 HETATM 23 C C2C HEM . . . QA 4 27.762 -1.363 91.294 1 80.46 ? C2C HEM 1002 O 1 HETATM 24 C C3C HEM . . . QA 4 29.01 -1.574 91.749 1 84.78 ? C3C HEM 1002 O 1 HETATM 25 C C4C HEM . . . QA 4 29.14 -2.979 92.07 1 82.86 ? C4C HEM 1002 O 1 HETATM 26 C CMC HEM . . . QA 4 27.124 -0.036 90.823 1 76.97 ? CMC HEM 1002 O 1 HETATM 27 C CAC HEM . . . QA 4 30.182 -0.592 91.991 1 92.01 ? CAC HEM 1002 O 1 HETATM 28 C CBC HEM . . . QA 4 30.064 0.733 92.076 1 96.79 ? CBC HEM 1002 O 1 HETATM 29 C C1D HEM . . . QA 4 30.464 -4.909 92.839 1 90.28 ? C1D HEM 1002 O 1 HETATM 30 C C2D HEM . . . QA 4 31.649 -5.502 93.433 1 90.83 ? C2D HEM 1002 O 1 HETATM 31 C C3D HEM . . . QA 4 31.45 -6.823 93.533 1 91.98 ? C3D HEM 1002 O 1 HETATM 32 C C4D HEM . . . QA 4 30.14 -7.109 92.968 1 93.39 ? C4D HEM 1002 O 1 HETATM 33 C CMD HEM . . . QA 4 32.891 -4.706 93.898 1 88.61 ? CMD HEM 1002 O 1 HETATM 34 C CAD HEM . . . QA 4 32.448 -7.87 94.095 1 90.05 ? CAD HEM 1002 O 1 HETATM 35 C CBD HEM . . . QA 4 32.255 -8.09 95.599 1 88.17 ? CBD HEM 1002 O 1 HETATM 36 C CGD HEM . . . QA 4 31.204 -9.136 95.909 1 91.03 ? CGD HEM 1002 O 1 HETATM 37 O O1D HEM . . . QA 4 30.363 -8.898 96.813 1 92.21 ? O1D HEM 1002 O 1 HETATM 38 O O2D HEM . . . QA 4 31.206 -10.231 95.291 1 93.18 ? O2D HEM 1002 O 1 HETATM 39 N NA HEM . . . QA 4 27.463 -7.655 91.72 1 90.19 ? NA HEM 1002 O 1 HETATM 40 N NB HEM . . . QA 4 25.862 -5.343 90.945 1 85.53 ? NB HEM 1002 O 1 HETATM 41 N NC HEM . . . QA 4 27.95 -3.607 91.775 1 83.62 ? NC HEM 1002 O 1 HETATM 42 N ND HEM . . . QA 4 29.566 -5.92 92.564 1 90.47 ? ND HEM 1002 O 1 HETATM 43 FE FE HEM . . . QA 4 27.711 -5.66 91.75 1 81.35 ? FE HEM 1002 O 1 HETATM 44 H HHB HEM . . . QA 4 24.564 -8.311 90.306 1 113.82 ? HHB HEM 1002 O 1 HETATM 45 H HHC HEM . . . QA 4 25.211 -2.114 90.74 1 98.87 ? HHC HEM 1002 O 1 HETATM 46 H HHD HEM . . . QA 4 31.026 -2.975 92.785 1 102.62 ? HHD HEM 1002 O 1 HETATM 47 H HMA HEM . . . QA 4 25.822 -11.529 90.879 1 125.42 ? HMA HEM 1002 O 1 HETATM 48 H HMAA HEM . . . QA 4 24.636 -10.46 90.991 1 125.42 ? HMAA HEM 1002 O 1 HETATM 49 H HMAB HEM . . . QA 4 25.153 -11.221 92.3 1 125.42 ? HMAB HEM 1002 O 1 HETATM 50 H HAA HEM . . . QA 4 29.228 -11.185 92.561 1 111.31 ? HAA HEM 1002 O 1 HETATM 51 H HAAA HEM . . . QA 4 27.83 -11.928 92.492 1 111.31 ? HAAA HEM 1002 O 1 HETATM 52 H HBA HEM . . . QA 4 27.292 -11.049 94.628 1 114.27 ? HBA HEM 1002 O 1 HETATM 53 H HBAA HEM . . . QA 4 28.733 -10.394 94.7 1 114.27 ? HBAA HEM 1002 O 1 HETATM 54 H HMB HEM . . . QA 4 22.569 -7.391 89.906 1 113.45 ? HMB HEM 1002 O 1 HETATM 55 H HMBA HEM . . . QA 4 22.709 -6.665 88.505 1 113.45 ? HMBA HEM 1002 O 1 HETATM 56 H HMBB HEM . . . QA 4 21.789 -6.04 89.632 1 113.45 ? HMBB HEM 1002 O 1 HETATM 57 H HAB HEM . . . QA 4 23.261 -2.335 89.915 1 110.09 ? HAB HEM 1002 O 1 HETATM 58 H HBB HEM . . . QA 4 21.489 -2.624 88.512 1 120.43 ? HBB HEM 1002 O 1 HETATM 59 H HBBA HEM . . . QA 4 21.809 -4.272 88.443 1 120.43 ? HBBA HEM 1002 O 1 HETATM 60 H HMC HEM . . . QA 4 27.678 0.362 90.133 1 93.02 ? HMC HEM 1002 O 1 HETATM 61 H HMCA HEM . . . QA 4 27.054 0.574 91.573 1 93.02 ? HMCA HEM 1002 O 1 HETATM 62 H HMCB HEM . . . QA 4 26.24 -0.211 90.465 1 93.02 ? HMCB HEM 1002 O 1 HETATM 63 H HAC HEM . . . QA 4 31.061 -0.966 92.087 1 111.07 ? HAC HEM 1002 O 1 HETATM 64 H HBC HEM . . . QA 4 30.85 1.281 92.23 1 116.81 ? HBC HEM 1002 O 1 HETATM 65 H HBCA HEM . . . QA 4 29.193 1.149 91.984 1 116.81 ? HBCA HEM 1002 O 1 HETATM 66 H HMD HEM . . . QA 4 33.131 -4.046 93.216 1 107 ? HMD HEM 1002 O 1 HETATM 67 H HMDA HEM . . . QA 4 33.641 -5.322 94.035 1 107 ? HMDA HEM 1002 O 1 HETATM 68 H HMDB HEM . . . QA 4 32.689 -4.247 94.74 1 107 ? HMDB HEM 1002 O 1 HETATM 69 H HAD HEM . . . QA 4 33.352 -7.557 93.937 1 108.73 ? HAD HEM 1002 O 1 HETATM 70 H HADA HEM . . . QA 4 32.312 -8.712 93.635 1 108.73 ? HADA HEM 1002 O 1 HETATM 71 H HBD HEM . . . QA 4 31.984 -7.25 96.003 1 106.47 ? HBD HEM 1002 O 1 HETATM 72 H HBDA HEM . . . QA 4 33.099 -8.376 95.982 1 106.47 ? HBDA HEM 1002 O 1 HETATM 73 H HHA HEM . . . QA 4 30.05 -9.118 93.173 1 112.81 ? HHA HEM 1002 O 1 # _model_server_stats.io_time_ms 90 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 107 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 73 #