data_6NIN # _model_server_result.job_id i6eyF2UUdgkqRfKLCgRSPw _model_server_result.datetime_utc '2024-10-15 11:28:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6nin # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"XA","auth_seq_id":1002}' # _entry.id 6NIN # _exptl.entry_id 6NIN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 616.487 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.97 _cell.angle_gamma 90 _cell.entry_id 6NIN _cell.length_a 356.661 _cell.length_b 145.752 _cell.length_c 162.223 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NIN _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA hexameric 6 author_and_software_defined_assembly 1 PISA hexameric 6 author_and_software_defined_assembly 2 PISA hexameric 6 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA 1 1 G,H,I,J,K,L,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA 2 1 M,N,O,P,Q,R,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 S N N ? 4 T N N ? 4 AA N N ? 4 BA N N ? 4 IA N N ? 4 JA N N ? 4 PA N N ? 4 QA N N ? 4 WA N N ? 4 XA N N ? 4 DB N N ? 4 EB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 185 A CYS 185 1_555 F SG CYS 70 G CYS 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 145 B CYS 145 1_555 B SG CYS 169 B CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf3 C SG CYS 70 C CYS 70 1_555 D SG CYS 185 E CYS 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 C SG CYS 134 C CYS 134 1_555 C SG CYS 151 C CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 E SG CYS 145 F CYS 145 1_555 E SG CYS 169 F CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf6 F SG CYS 134 G CYS 134 1_555 F SG CYS 151 G CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf7 G SG CYS 185 K CYS 185 1_555 L SG CYS 70 Q CYS 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf8 H SG CYS 145 L CYS 145 1_555 H SG CYS 169 L CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf9 I SG CYS 70 M CYS 70 1_555 J SG CYS 185 O CYS 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf10 I SG CYS 134 M CYS 134 1_555 I SG CYS 151 M CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf11 K SG CYS 145 P CYS 145 1_555 K SG CYS 169 P CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf12 L SG CYS 134 Q CYS 134 1_555 L SG CYS 151 Q CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf13 M SG CYS 185 S CYS 185 1_555 R SG CYS 70 Y CYS 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf14 N SG CYS 145 T CYS 145 1_555 N SG CYS 169 T CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf15 O SG CYS 70 U CYS 70 1_555 P SG CYS 185 W CYS 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf16 O SG CYS 134 U CYS 134 1_555 O SG CYS 151 U CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf17 Q SG CYS 145 X CYS 145 1_555 Q SG CYS 169 X CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf18 R SG CYS 134 Y CYS 134 1_555 R SG CYS 151 Y CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 B SG CYS 36 B CYS 36 1_555 W CAB HEC . B HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.812 ? covale ? covale2 B SG CYS 39 B CYS 39 1_555 W CAC HEC . B HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.914 ? covale ? covale3 E SG CYS 36 F CYS 36 1_555 EA CAB HEC . F HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.789 ? covale ? covale4 E SG CYS 39 F CYS 39 1_555 EA CAC HEC . F HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.892 ? covale ? covale5 H SG CYS 36 L CYS 36 1_555 LA CAB HEC . L HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.785 ? covale ? covale6 H SG CYS 39 L CYS 39 1_555 LA CAC HEC . L HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.894 ? covale ? covale7 K SG CYS 36 P CYS 36 1_555 SA CAB HEC . P HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale8 K SG CYS 39 P CYS 39 1_555 SA CAC HEC . P HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.898 ? covale ? covale9 N SG CYS 36 T CYS 36 1_555 ZA CAB HEC . T HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.799 ? covale ? covale10 N SG CYS 39 T CYS 39 1_555 ZA CAC HEC . T HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.867 ? covale ? covale11 Q SG CYS 36 X CYS 36 1_555 HB CAB HEC . X HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.774 ? covale ? covale12 Q SG CYS 39 X CYS 39 1_555 HB CAC HEC . X HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.869 ? metalc ? metalc1 A NE2 HIS 97 A HIS 97 1_555 T FE HEM . A HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc2 A NE2 HIS 111 A HIS 111 1_555 S FE HEM . A HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc3 A NE2 HIS 198 A HIS 198 1_555 T FE HEM . A HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc4 A NE2 HIS 212 A HIS 212 1_555 S FE HEM . A HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc5 B OD1 ASP 8 B ASP 8 1_555 X SR SR . B SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? metalc ? metalc6 B O VAL 9 B VAL 9 1_555 X SR SR . B SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc7 B OE1 GLU 14 B GLU 14 1_555 X SR SR . B SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? metalc ? metalc8 B OE2 GLU 14 B GLU 14 1_555 X SR SR . B SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.693 ? metalc ? metalc9 B NE2 HIS 40 B HIS 40 1_555 W FE HEC . B HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc10 B OE2 GLU 129 B GLU 129 1_555 X SR SR . B SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? metalc ? metalc11 B SD MET 185 B MET 185 1_555 W FE HEC . B HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc12 C SG CYS 129 C CYS 129 1_555 Z FE1 FES . C FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc13 C ND1 HIS 131 C HIS 131 1_555 Z FE2 FES . C FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc14 C SG CYS 149 C CYS 149 1_555 Z FE1 FES . C FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc15 C ND1 HIS 152 C HIS 152 1_555 Z FE2 FES . C FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc16 D NE2 HIS 97 E HIS 97 1_555 BA FE HEM . E HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc17 D NE2 HIS 111 E HIS 111 1_555 AA FE HEM . E HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc18 D NE2 HIS 198 E HIS 198 1_555 BA FE HEM . E HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc19 D NE2 HIS 212 E HIS 212 1_555 AA FE HEM . E HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc20 E OD1 ASP 8 F ASP 8 1_555 GA SR SR . F SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? metalc ? metalc21 E O VAL 9 F VAL 9 1_555 GA SR SR . F SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.727 ? metalc ? metalc22 E OE1 GLU 14 F GLU 14 1_555 GA SR SR . F SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc23 E OE2 GLU 14 F GLU 14 1_555 GA SR SR . F SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc24 E NE2 HIS 40 F HIS 40 1_555 EA FE HEC . F HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? metalc ? metalc25 E OE2 GLU 129 F GLU 129 1_555 GA SR SR . F SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? metalc ? metalc26 E SD MET 185 F MET 185 1_555 EA FE HEC . F HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc27 F SG CYS 129 G CYS 129 1_555 HA FE1 FES . G FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc28 F ND1 HIS 131 G HIS 131 1_555 HA FE2 FES . G FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc29 F SG CYS 149 G CYS 149 1_555 HA FE1 FES . G FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc30 F ND1 HIS 152 G HIS 152 1_555 HA FE2 FES . G FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc31 G NE2 HIS 97 K HIS 97 1_555 JA FE HEM . K HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc32 G NE2 HIS 111 K HIS 111 1_555 IA FE HEM . K HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc33 G NE2 HIS 198 K HIS 198 1_555 JA FE HEM . K HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc34 G NE2 HIS 212 K HIS 212 1_555 IA FE HEM . K HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc35 H OD1 ASP 8 L ASP 8 1_555 MA SR SR . L SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? metalc ? metalc36 H O VAL 9 L VAL 9 1_555 MA SR SR . L SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.629 ? metalc ? metalc37 H OE1 GLU 14 L GLU 14 1_555 MA SR SR . L SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.701 ? metalc ? metalc38 H OE2 GLU 14 L GLU 14 1_555 MA SR SR . L SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.652 ? metalc ? metalc39 H NE2 HIS 40 L HIS 40 1_555 LA FE HEC . L HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? metalc ? metalc40 H OE2 GLU 129 L GLU 129 1_555 MA SR SR . L SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.706 ? metalc ? metalc41 H SD MET 185 L MET 185 1_555 LA FE HEC . L HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc42 I SG CYS 129 M CYS 129 1_555 OA FE1 FES . M FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc43 I ND1 HIS 131 M HIS 131 1_555 OA FE2 FES . M FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc44 I SG CYS 149 M CYS 149 1_555 OA FE1 FES . M FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc45 I ND1 HIS 152 M HIS 152 1_555 OA FE2 FES . M FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc46 J NE2 HIS 97 O HIS 97 1_555 QA FE HEM . O HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc47 J NE2 HIS 111 O HIS 111 1_555 PA FE HEM . O HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc48 J NE2 HIS 198 O HIS 198 1_555 QA FE HEM . O HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc49 J NE2 HIS 212 O HIS 212 1_555 PA FE HEM . O HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc50 K OD1 ASP 8 P ASP 8 1_555 UA SR SR . P SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? metalc ? metalc51 K O VAL 9 P VAL 9 1_555 UA SR SR . P SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.708 ? metalc ? metalc52 K OE1 GLU 14 P GLU 14 1_555 UA SR SR . P SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.603 ? metalc ? metalc53 K OE2 GLU 14 P GLU 14 1_555 UA SR SR . P SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? metalc ? metalc54 K NE2 HIS 40 P HIS 40 1_555 SA FE HEC . P HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc55 K OE2 GLU 129 P GLU 129 1_555 UA SR SR . P SR 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? metalc ? metalc56 K SD MET 185 P MET 185 1_555 SA FE HEC . P HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc57 L SG CYS 129 Q CYS 129 1_555 VA FE1 FES . Q FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc58 L ND1 HIS 131 Q HIS 131 1_555 VA FE2 FES . Q FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc59 L SG CYS 149 Q CYS 149 1_555 VA FE1 FES . Q FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc60 L ND1 HIS 152 Q HIS 152 1_555 VA FE2 FES . Q FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc61 M NE2 HIS 97 S HIS 97 1_555 XA FE HEM . S HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc62 M NE2 HIS 111 S HIS 111 1_555 WA FE HEM . S HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc63 M NE2 HIS 198 S HIS 198 1_555 XA FE HEM . S HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc64 M NE2 HIS 212 S HIS 212 1_555 WA FE HEM . S HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc65 N OD1 ASP 8 T ASP 8 1_555 AB SR SR . T SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? metalc ? metalc66 N O VAL 9 T VAL 9 1_555 AB SR SR . T SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? metalc ? metalc67 N OE1 GLU 14 T GLU 14 1_555 AB SR SR . T SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.674 ? metalc ? metalc68 N OE2 GLU 14 T GLU 14 1_555 AB SR SR . T SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.675 ? metalc ? metalc69 N NE2 HIS 40 T HIS 40 1_555 ZA FE HEC . T HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc70 N OE2 GLU 129 T GLU 129 1_555 AB SR SR . T SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc71 N SD MET 185 T MET 185 1_555 ZA FE HEC . T HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? metalc ? metalc72 O SG CYS 129 U CYS 129 1_555 CB FE1 FES . U FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc73 O ND1 HIS 131 U HIS 131 1_555 CB FE2 FES . U FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc74 O SG CYS 149 U CYS 149 1_555 CB FE1 FES . U FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc75 O ND1 HIS 152 U HIS 152 1_555 CB FE2 FES . U FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc76 P NE2 HIS 97 W HIS 97 1_555 EB FE HEM . W HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc77 P NE2 HIS 111 W HIS 111 1_555 DB FE HEM . W HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc78 P NE2 HIS 198 W HIS 198 1_555 EB FE HEM . W HEM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc79 P NE2 HIS 212 W HIS 212 1_555 DB FE HEM . W HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc80 Q OD1 ASP 8 X ASP 8 1_555 IB SR SR . X SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? metalc ? metalc81 Q O VAL 9 X VAL 9 1_555 IB SR SR . X SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? metalc ? metalc82 Q OE1 GLU 14 X GLU 14 1_555 IB SR SR . X SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? metalc ? metalc83 Q OE2 GLU 14 X GLU 14 1_555 IB SR SR . X SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc84 Q NE2 HIS 40 X HIS 40 1_555 HB FE HEC . X HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc85 Q OE2 GLU 129 X GLU 129 1_555 IB SR SR . X SR 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.674 ? metalc ? metalc86 Q SD MET 185 X MET 185 1_555 HB FE HEC . X HEC 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc87 R SG CYS 129 Y CYS 129 1_555 KB FE1 FES . Y FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc88 R ND1 HIS 131 Y HIS 131 1_555 KB FE2 FES . Y FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc89 R SG CYS 149 Y CYS 149 1_555 KB FE1 FES . Y FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc90 R ND1 HIS 152 Y HIS 152 1_555 KB FE2 FES . Y FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 324 n n CHA C4D HEM doub 325 n n CHA HHA HEM sing 326 n n CHB C4A HEM sing 327 n n CHB C1B HEM doub 328 n n CHB HHB HEM sing 329 n n CHC C4B HEM sing 330 n n CHC C1C HEM doub 331 n n CHC HHC HEM sing 332 n n CHD C4C HEM doub 333 n n CHD C1D HEM sing 334 n n CHD HHD HEM sing 335 n n C1A C2A HEM doub 336 n y C1A NA HEM sing 337 n y C2A C3A HEM sing 338 n y C2A CAA HEM sing 339 n n C3A C4A HEM doub 340 n y C3A CMA HEM sing 341 n n C4A NA HEM sing 342 n y CMA HMA HEM sing 343 n n CMA HMAA HEM sing 344 n n CMA HMAB HEM sing 345 n n CAA CBA HEM sing 346 n n CAA HAA HEM sing 347 n n CAA HAAA HEM sing 348 n n CBA CGA HEM sing 349 n n CBA HBA HEM sing 350 n n CBA HBAA HEM sing 351 n n CGA O1A HEM doub 352 n n CGA O2A HEM sing 353 n n C1B C2B HEM sing 354 n n C1B NB HEM sing 355 n n C2B C3B HEM doub 356 n n C2B CMB HEM sing 357 n n C3B C4B HEM sing 358 n n C3B CAB HEM sing 359 n n C4B NB HEM doub 360 n n CMB HMB HEM sing 361 n n CMB HMBA HEM sing 362 n n CMB HMBB HEM sing 363 n n CAB CBB HEM doub 364 n n CAB HAB HEM sing 365 n n CBB HBB HEM sing 366 n n CBB HBBA HEM sing 367 n n C1C C2C HEM sing 368 n y C1C NC HEM sing 369 n y C2C C3C HEM doub 370 n y C2C CMC HEM sing 371 n n C3C C4C HEM sing 372 n y C3C CAC HEM sing 373 n n C4C NC HEM sing 374 n y CMC HMC HEM sing 375 n n CMC HMCA HEM sing 376 n n CMC HMCB HEM sing 377 n n CAC CBC HEM doub 378 n n CAC HAC HEM sing 379 n n CBC HBC HEM sing 380 n n CBC HBCA HEM sing 381 n n C1D C2D HEM sing 382 n n C1D ND HEM doub 383 n n C2D C3D HEM doub 384 n n C2D CMD HEM sing 385 n n C3D C4D HEM sing 386 n n C3D CAD HEM sing 387 n n C4D ND HEM sing 388 n n CMD HMD HEM sing 389 n n CMD HMDA HEM sing 390 n n CMD HMDB HEM sing 391 n n CAD CBD HEM sing 392 n n CAD HAD HEM sing 393 n n CAD HADA HEM sing 394 n n CBD CGD HEM sing 395 n n CBD HBD HEM sing 396 n n CBD HBDA HEM sing 397 n n CGD O1D HEM doub 398 n n CGD O2D HEM sing 399 n n O2A H2A HEM sing 400 n n O2D H2D HEM sing 401 n n FE NA HEM sing 402 n n FE NB HEM sing 403 n n FE NC HEM sing 404 n n FE ND HEM sing 405 n n # _atom_sites.entry_id 6NIN _atom_sites.fract_transf_matrix[1][1] 0.002804 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00075 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006861 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006381 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code S 4 HEM A 1 1001 1001 HEM HEM . T 4 HEM A 1 1002 1002 HEM HEM . U 5 SMA A 1 1003 1101 SMA SMA . V 6 6PE A 1 1004 2001 6PE 6PE . W 7 HEC B 1 1001 1001 HEC HEC . X 8 SR B 1 1002 2001 SR SR . Y 9 BOG B 1 1003 2002 BOG BOG . Z 10 FES C 1 1001 1001 FES FES . AA 4 HEM E 1 1001 1001 HEM HEM . BA 4 HEM E 1 1002 1002 HEM HEM . CA 5 SMA E 1 1003 1101 SMA SMA . DA 6 6PE E 1 1004 2001 6PE 6PE . EA 7 HEC F 1 1001 1001 HEC HEC . FA 9 BOG F 1 1002 2002 BOG BOG . GA 8 SR F 1 1003 2001 SR SR . HA 10 FES G 1 1001 1001 FES FES . IA 4 HEM K 1 1001 1001 HEM HEM . JA 4 HEM K 1 1002 1002 HEM HEM . KA 5 SMA K 1 1003 1101 SMA SMA . LA 7 HEC L 1 1001 1001 HEC HEC . MA 8 SR L 1 1002 2001 SR SR . NA 9 BOG L 1 1003 2002 BOG BOG . OA 10 FES M 1 1001 1001 FES FES . PA 4 HEM O 1 1001 1001 HEM HEM . QA 4 HEM O 1 1002 1002 HEM HEM . RA 5 SMA O 1 1003 1101 SMA SMA . SA 7 HEC P 1 1001 1001 HEC HEC . TA 9 BOG P 1 1002 2002 BOG BOG . UA 8 SR P 1 1003 2001 SR SR . VA 10 FES Q 1 1001 1001 FES FES . WA 4 HEM S 1 1001 1001 HEM HEM . XA 4 HEM S 1 1002 1002 HEM HEM . YA 5 SMA S 1 1003 1101 SMA SMA . ZA 7 HEC T 1 1001 1001 HEC HEC . AB 8 SR T 1 1002 2001 SR SR . BB 9 BOG T 1 1003 2002 BOG BOG . CB 10 FES U 1 1001 1001 FES FES . DB 4 HEM W 1 1001 1001 HEM HEM . EB 4 HEM W 1 1002 1002 HEM HEM . FB 5 SMA W 1 1003 1101 SMA SMA . GB 6 6PE W 1 1004 2001 6PE 6PE . HB 7 HEC X 1 1001 1001 HEC HEC . IB 8 SR X 1 1002 2001 SR SR . JB 9 BOG X 1 1003 2002 BOG BOG . KB 10 FES Y 1 1001 1001 FES FES . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . XA 4 -1.215 -64.6 33.974 1 106.51 ? CHA HEM 1002 S 1 HETATM 2 C CHB HEM . . . XA 4 -3.368 -60.279 34.504 1 113.36 ? CHB HEM 1002 S 1 HETATM 3 C CHC HEM . . . XA 4 -7.596 -62.18 33.123 1 101.03 ? CHC HEM 1002 S 1 HETATM 4 C CHD HEM . . . XA 4 -5.571 -66.574 33.342 1 98.62 ? CHD HEM 1002 S 1 HETATM 5 C C1A HEM . . . XA 4 -1.413 -63.252 34.168 1 107.47 ? C1A HEM 1002 S 1 HETATM 6 C C2A HEM . . . XA 4 -0.378 -62.262 34.368 1 107.36 ? C2A HEM 1002 S 1 HETATM 7 C C3A HEM . . . XA 4 -0.966 -61.07 34.515 1 109.84 ? C3A HEM 1002 S 1 HETATM 8 C C4A HEM . . . XA 4 -2.402 -61.26 34.41 1 110.51 ? C4A HEM 1002 S 1 HETATM 9 C CMA HEM . . . XA 4 -0.244 -59.726 34.753 1 114.1 ? CMA HEM 1002 S 1 HETATM 10 C CAA HEM . . . XA 4 1.132 -62.576 34.404 1 107.25 ? CAA HEM 1002 S 1 HETATM 11 C CBA HEM . . . XA 4 1.631 -62.773 32.978 1 110.74 ? CBA HEM 1002 S 1 HETATM 12 C CGA HEM . . . XA 4 3.119 -62.986 32.986 1 121.43 ? CGA HEM 1002 S 1 HETATM 13 O O1A HEM . . . XA 4 3.746 -62.881 34.072 1 126.97 ? O1A HEM 1002 S 1 HETATM 14 O O2A HEM . . . XA 4 3.678 -63.269 31.896 1 125.19 ? O2A HEM 1002 S 1 HETATM 15 C C1B HEM . . . XA 4 -4.694 -60.397 34.138 1 109.13 ? C1B HEM 1002 S 1 HETATM 16 C C2B HEM . . . XA 4 -5.669 -59.324 34.068 1 109.61 ? C2B HEM 1002 S 1 HETATM 17 C C3B HEM . . . XA 4 -6.837 -59.86 33.675 1 107.62 ? C3B HEM 1002 S 1 HETATM 18 C C4B HEM . . . XA 4 -6.636 -61.279 33.511 1 101.89 ? C4B HEM 1002 S 1 HETATM 19 C CMB HEM . . . XA 4 -5.338 -57.845 34.381 1 113.35 ? CMB HEM 1002 S 1 HETATM 20 C CAB HEM . . . XA 4 -8.22 -59.207 33.438 1 116.87 ? CAB HEM 1002 S 1 HETATM 21 C CBB HEM . . . XA 4 -8.538 -57.975 33.85 1 125.51 ? CBB HEM 1002 S 1 HETATM 22 C C1C HEM . . . XA 4 -7.447 -63.546 33.144 1 101.83 ? C1C HEM 1002 S 1 HETATM 23 C C2C HEM . . . XA 4 -8.502 -64.533 33.034 1 100.15 ? C2C HEM 1002 S 1 HETATM 24 C C3C HEM . . . XA 4 -7.926 -65.746 33.116 1 100.37 ? C3C HEM 1002 S 1 HETATM 25 C C4C HEM . . . XA 4 -6.498 -65.559 33.247 1 100.27 ? C4C HEM 1002 S 1 HETATM 26 C CMC HEM . . . XA 4 -10 -64.182 32.882 1 101.04 ? CMC HEM 1002 S 1 HETATM 27 C CAC HEM . . . XA 4 -8.526 -67.168 33.049 1 101.82 ? CAC HEM 1002 S 1 HETATM 28 C CBC HEM . . . XA 4 -9.726 -67.458 32.556 1 103.23 ? CBC HEM 1002 S 1 HETATM 29 C C1D HEM . . . XA 4 -4.214 -66.428 33.478 1 98.11 ? C1D HEM 1002 S 1 HETATM 30 C C2D HEM . . . XA 4 -3.243 -67.502 33.441 1 98.65 ? C2D HEM 1002 S 1 HETATM 31 C C3D HEM . . . XA 4 -2.028 -66.963 33.603 1 101.16 ? C3D HEM 1002 S 1 HETATM 32 C C4D HEM . . . XA 4 -2.204 -65.531 33.768 1 101.1 ? C4D HEM 1002 S 1 HETATM 33 C CMD HEM . . . XA 4 -3.591 -68.995 33.224 1 96.11 ? CMD HEM 1002 S 1 HETATM 34 C CAD HEM . . . XA 4 -0.678 -67.722 33.638 1 105.73 ? CAD HEM 1002 S 1 HETATM 35 C CBD HEM . . . XA 4 -0.072 -67.813 32.233 1 108.83 ? CBD HEM 1002 S 1 HETATM 36 C CGD HEM . . . XA 4 0.767 -66.606 31.876 1 113.65 ? CGD HEM 1002 S 1 HETATM 37 O O1D HEM . . . XA 4 0.606 -66.083 30.743 1 114.64 ? O1D HEM 1002 S 1 HETATM 38 O O2D HEM . . . XA 4 1.609 -66.161 32.7 1 116.01 ? O2D HEM 1002 S 1 HETATM 39 N NA HEM . . . XA 4 -2.637 -62.608 34.205 1 103.85 ? NA HEM 1002 S 1 HETATM 40 N NB HEM . . . XA 4 -5.323 -61.58 33.803 1 99.92 ? NB HEM 1002 S 1 HETATM 41 N NC HEM . . . XA 4 -6.237 -64.206 33.265 1 98.78 ? NC HEM 1002 S 1 HETATM 42 N ND HEM . . . XA 4 -3.548 -65.241 33.677 1 94.3 ? ND HEM 1002 S 1 HETATM 43 FE FE HEM . . . XA 4 -4.418 -63.436 33.739 1 94.09 ? FE HEM 1002 S 1 HETATM 44 H HHB HEM . . . XA 4 -3.085 -59.413 34.865 1 136.69 ? HHB HEM 1002 S 1 HETATM 45 H HHC HEM . . . XA 4 -8.453 -61.822 32.808 1 121.91 ? HHC HEM 1002 S 1 HETATM 46 H HHD HEM . . . XA 4 -5.915 -67.491 33.309 1 119.01 ? HHD HEM 1002 S 1 HETATM 47 H HMA HEM . . . XA 4 0.286 -59.78 35.576 1 137.58 ? HMA HEM 1002 S 1 HETATM 48 H HMAA HEM . . . XA 4 -0.907 -59.009 34.839 1 137.58 ? HMAA HEM 1002 S 1 HETATM 49 H HMAB HEM . . . XA 4 0.348 -59.534 33.996 1 137.58 ? HMAB HEM 1002 S 1 HETATM 50 H HAA HEM . . . XA 4 1.284 -63.385 34.916 1 129.36 ? HAA HEM 1002 S 1 HETATM 51 H HAAA HEM . . . XA 4 1.608 -61.838 34.816 1 129.36 ? HAAA HEM 1002 S 1 HETATM 52 H HBA HEM . . . XA 4 1.421 -61.986 32.452 1 133.56 ? HBA HEM 1002 S 1 HETATM 53 H HBAA HEM . . . XA 4 1.196 -63.548 32.589 1 133.56 ? HBAA HEM 1002 S 1 HETATM 54 H HMB HEM . . . XA 4 -4.391 -57.689 34.242 1 136.68 ? HMB HEM 1002 S 1 HETATM 55 H HMBA HEM . . . XA 4 -5.566 -57.651 35.304 1 136.68 ? HMBA HEM 1002 S 1 HETATM 56 H HMBB HEM . . . XA 4 -5.851 -57.267 33.794 1 136.68 ? HMBB HEM 1002 S 1 HETATM 57 H HAB HEM . . . XA 4 -8.887 -59.715 32.97 1 140.91 ? HAB HEM 1002 S 1 HETATM 58 H HBB HEM . . . XA 4 -9.422 -57.618 33.673 1 151.28 ? HBB HEM 1002 S 1 HETATM 59 H HBBA HEM . . . XA 4 -7.885 -57.439 34.326 1 151.28 ? HBBA HEM 1002 S 1 HETATM 60 H HMC HEM . . . XA 4 -10.314 -64.473 32.012 1 121.92 ? HMC HEM 1002 S 1 HETATM 61 H HMCA HEM . . . XA 4 -10.118 -63.222 32.963 1 121.92 ? HMCA HEM 1002 S 1 HETATM 62 H HMCB HEM . . . XA 4 -10.51 -64.629 33.575 1 121.92 ? HMCB HEM 1002 S 1 HETATM 63 H HAC HEM . . . XA 4 -7.995 -67.892 33.388 1 122.85 ? HAC HEM 1002 S 1 HETATM 64 H HBC HEM . . . XA 4 -10.037 -68.377 32.547 1 124.54 ? HBC HEM 1002 S 1 HETATM 65 H HBCA HEM . . . XA 4 -10.29 -66.751 32.205 1 124.54 ? HBCA HEM 1002 S 1 HETATM 66 H HMD HEM . . . XA 4 -4.308 -69.256 33.839 1 116 ? HMD HEM 1002 S 1 HETATM 67 H HMDA HEM . . . XA 4 -2.797 -69.544 33.395 1 116 ? HMDA HEM 1002 S 1 HETATM 68 H HMDB HEM . . . XA 4 -3.888 -69.13 32.3 1 116 ? HMDB HEM 1002 S 1 HETATM 69 H HAD HEM . . . XA 4 -0.824 -68.617 33.981 1 127.54 ? HAD HEM 1002 S 1 HETATM 70 H HADA HEM . . . XA 4 -0.062 -67.249 34.22 1 127.54 ? HADA HEM 1002 S 1 HETATM 71 H HBD HEM . . . XA 4 -0.794 -67.89 31.589 1 131.26 ? HBD HEM 1002 S 1 HETATM 72 H HBDA HEM . . . XA 4 0.487 -68.604 32.188 1 131.26 ? HBDA HEM 1002 S 1 HETATM 73 H HHA HEM . . . XA 4 -0.29 -64.923 33.983 1 128.48 ? HHA HEM 1002 S 1 # _model_server_stats.io_time_ms 87 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 389 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 73 #