data_6NOK # _model_server_result.job_id PaRZplldnqSPiam-iHruwA _model_server_result.datetime_utc '2024-11-14 05:12:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6nok # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 6NOK # _exptl.entry_id 6NOK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.75 _cell.angle_gamma 90 _cell.entry_id 6NOK _cell.length_a 37.556 _cell.length_b 66.324 _cell.length_c 46.953 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NOK _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O THR 256 A THR 222 1_555 C NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc2 A O GLY 259 A GLY 225 1_555 C NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc3 C NA NA . A NA 402 1_555 D O HOH . A HOH 717 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6NOK _atom_sites.fract_transf_matrix[1][1] 0.026627 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002681 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015077 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021406 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MYR A 1 401 401 MYR MYR . C 3 NA A 1 402 1 NA NA . D 4 HOH A 1 501 168 HOH HOH . D 4 HOH A 2 502 276 HOH HOH . D 4 HOH A 3 503 340 HOH HOH . D 4 HOH A 4 504 62 HOH HOH . D 4 HOH A 5 505 334 HOH HOH . D 4 HOH A 6 506 97 HOH HOH . D 4 HOH A 7 507 148 HOH HOH . D 4 HOH A 8 508 358 HOH HOH . D 4 HOH A 9 509 279 HOH HOH . D 4 HOH A 10 510 289 HOH HOH . D 4 HOH A 11 511 6 HOH HOH . D 4 HOH A 12 512 135 HOH HOH . D 4 HOH A 13 513 248 HOH HOH . D 4 HOH A 14 514 36 HOH HOH . D 4 HOH A 15 515 4 HOH HOH . D 4 HOH A 16 516 80 HOH HOH . D 4 HOH A 17 517 7 HOH HOH . D 4 HOH A 18 518 76 HOH HOH . D 4 HOH A 19 519 48 HOH HOH . D 4 HOH A 20 520 21 HOH HOH . D 4 HOH A 21 521 293 HOH HOH . D 4 HOH A 22 522 123 HOH HOH . D 4 HOH A 23 523 8 HOH HOH . D 4 HOH A 24 524 60 HOH HOH . D 4 HOH A 25 525 204 HOH HOH . D 4 HOH A 26 526 59 HOH HOH . D 4 HOH A 27 527 33 HOH HOH . D 4 HOH A 28 528 299 HOH HOH . D 4 HOH A 29 529 68 HOH HOH . D 4 HOH A 30 530 12 HOH HOH . D 4 HOH A 31 531 346 HOH HOH . D 4 HOH A 32 532 164 HOH HOH . D 4 HOH A 33 533 253 HOH HOH . D 4 HOH A 34 534 95 HOH HOH . D 4 HOH A 35 535 38 HOH HOH . D 4 HOH A 36 536 272 HOH HOH . D 4 HOH A 37 537 14 HOH HOH . D 4 HOH A 38 538 51 HOH HOH . D 4 HOH A 39 539 113 HOH HOH . D 4 HOH A 40 540 18 HOH HOH . D 4 HOH A 41 541 42 HOH HOH . D 4 HOH A 42 542 24 HOH HOH . D 4 HOH A 43 543 112 HOH HOH . D 4 HOH A 44 544 47 HOH HOH . D 4 HOH A 45 545 61 HOH HOH . D 4 HOH A 46 546 88 HOH HOH . D 4 HOH A 47 547 20 HOH HOH . D 4 HOH A 48 548 122 HOH HOH . D 4 HOH A 49 549 49 HOH HOH . D 4 HOH A 50 550 27 HOH HOH . D 4 HOH A 51 551 126 HOH HOH . D 4 HOH A 52 552 17 HOH HOH . D 4 HOH A 53 553 333 HOH HOH . D 4 HOH A 54 554 15 HOH HOH . D 4 HOH A 55 555 73 HOH HOH . D 4 HOH A 56 556 66 HOH HOH . D 4 HOH A 57 557 22 HOH HOH . D 4 HOH A 58 558 227 HOH HOH . D 4 HOH A 59 559 18 HOH HOH . D 4 HOH A 60 560 62 HOH HOH . D 4 HOH A 61 561 314 HOH HOH . D 4 HOH A 62 562 11 HOH HOH . D 4 HOH A 63 563 9 HOH HOH . D 4 HOH A 64 564 117 HOH HOH . D 4 HOH A 65 565 119 HOH HOH . D 4 HOH A 66 566 25 HOH HOH . D 4 HOH A 67 567 52 HOH HOH . D 4 HOH A 68 568 2 HOH HOH . D 4 HOH A 69 569 140 HOH HOH . D 4 HOH A 70 570 71 HOH HOH . D 4 HOH A 71 571 183 HOH HOH . D 4 HOH A 72 572 305 HOH HOH . D 4 HOH A 73 573 206 HOH HOH . D 4 HOH A 74 574 13 HOH HOH . D 4 HOH A 75 575 329 HOH HOH . D 4 HOH A 76 576 4 HOH HOH . D 4 HOH A 77 577 45 HOH HOH . D 4 HOH A 78 578 35 HOH HOH . D 4 HOH A 79 579 284 HOH HOH . D 4 HOH A 80 580 302 HOH HOH . D 4 HOH A 81 581 43 HOH HOH . D 4 HOH A 82 582 220 HOH HOH . D 4 HOH A 83 583 12 HOH HOH . D 4 HOH A 84 584 104 HOH HOH . D 4 HOH A 85 585 61 HOH HOH . D 4 HOH A 86 586 157 HOH HOH . D 4 HOH A 87 587 99 HOH HOH . D 4 HOH A 88 588 242 HOH HOH . D 4 HOH A 89 589 219 HOH HOH . D 4 HOH A 90 590 34 HOH HOH . D 4 HOH A 91 591 17 HOH HOH . D 4 HOH A 92 592 8 HOH HOH . D 4 HOH A 93 593 72 HOH HOH . D 4 HOH A 94 594 280 HOH HOH . D 4 HOH A 95 595 53 HOH HOH . D 4 HOH A 96 596 357 HOH HOH . D 4 HOH A 97 597 341 HOH HOH . D 4 HOH A 98 598 232 HOH HOH . D 4 HOH A 99 599 65 HOH HOH . D 4 HOH A 100 600 344 HOH HOH . D 4 HOH A 101 601 34 HOH HOH . D 4 HOH A 102 602 156 HOH HOH . D 4 HOH A 103 603 46 HOH HOH . D 4 HOH A 104 604 13 HOH HOH . D 4 HOH A 105 605 160 HOH HOH . D 4 HOH A 106 606 52 HOH HOH . D 4 HOH A 107 607 116 HOH HOH . D 4 HOH A 108 608 29 HOH HOH . D 4 HOH A 109 609 33 HOH HOH . D 4 HOH A 110 610 30 HOH HOH . D 4 HOH A 111 611 108 HOH HOH . D 4 HOH A 112 612 94 HOH HOH . D 4 HOH A 113 613 352 HOH HOH . D 4 HOH A 114 614 159 HOH HOH . D 4 HOH A 115 615 35 HOH HOH . D 4 HOH A 116 616 84 HOH HOH . D 4 HOH A 117 617 31 HOH HOH . D 4 HOH A 118 618 275 HOH HOH . D 4 HOH A 119 619 46 HOH HOH . D 4 HOH A 120 620 3 HOH HOH . D 4 HOH A 121 621 244 HOH HOH . D 4 HOH A 122 622 41 HOH HOH . D 4 HOH A 123 623 151 HOH HOH . D 4 HOH A 124 624 32 HOH HOH . D 4 HOH A 125 625 37 HOH HOH . D 4 HOH A 126 626 10 HOH HOH . D 4 HOH A 127 627 20 HOH HOH . D 4 HOH A 128 628 354 HOH HOH . D 4 HOH A 129 629 54 HOH HOH . D 4 HOH A 130 630 109 HOH HOH . D 4 HOH A 131 631 173 HOH HOH . D 4 HOH A 132 632 24 HOH HOH . D 4 HOH A 133 633 131 HOH HOH . D 4 HOH A 134 634 70 HOH HOH . D 4 HOH A 135 635 90 HOH HOH . D 4 HOH A 136 636 9 HOH HOH . D 4 HOH A 137 637 114 HOH HOH . D 4 HOH A 138 638 83 HOH HOH . D 4 HOH A 139 639 229 HOH HOH . D 4 HOH A 140 640 23 HOH HOH . D 4 HOH A 141 641 245 HOH HOH . D 4 HOH A 142 642 183 HOH HOH . D 4 HOH A 143 643 50 HOH HOH . D 4 HOH A 144 644 118 HOH HOH . D 4 HOH A 145 645 152 HOH HOH . D 4 HOH A 146 646 274 HOH HOH . D 4 HOH A 147 647 226 HOH HOH . D 4 HOH A 148 648 22 HOH HOH . D 4 HOH A 149 649 86 HOH HOH . D 4 HOH A 150 650 58 HOH HOH . D 4 HOH A 151 651 101 HOH HOH . D 4 HOH A 152 652 142 HOH HOH . D 4 HOH A 153 653 315 HOH HOH . D 4 HOH A 154 654 27 HOH HOH . D 4 HOH A 155 655 259 HOH HOH . D 4 HOH A 156 656 335 HOH HOH . D 4 HOH A 157 657 361 HOH HOH . D 4 HOH A 158 658 125 HOH HOH . D 4 HOH A 159 659 42 HOH HOH . D 4 HOH A 160 660 67 HOH HOH . D 4 HOH A 161 661 110 HOH HOH . D 4 HOH A 162 662 337 HOH HOH . D 4 HOH A 163 663 3 HOH HOH . D 4 HOH A 164 664 338 HOH HOH . D 4 HOH A 165 665 263 HOH HOH . D 4 HOH A 166 666 36 HOH HOH . D 4 HOH A 167 667 217 HOH HOH . D 4 HOH A 168 668 55 HOH HOH . D 4 HOH A 169 669 137 HOH HOH . D 4 HOH A 170 670 149 HOH HOH . D 4 HOH A 171 671 2 HOH HOH . D 4 HOH A 172 672 30 HOH HOH . D 4 HOH A 173 673 121 HOH HOH . D 4 HOH A 174 674 356 HOH HOH . D 4 HOH A 175 675 273 HOH HOH . D 4 HOH A 176 676 28 HOH HOH . D 4 HOH A 177 677 14 HOH HOH . D 4 HOH A 178 678 339 HOH HOH . D 4 HOH A 179 679 178 HOH HOH . D 4 HOH A 180 680 107 HOH HOH . D 4 HOH A 181 681 180 HOH HOH . D 4 HOH A 182 682 60 HOH HOH . D 4 HOH A 183 683 316 HOH HOH . D 4 HOH A 184 684 188 HOH HOH . D 4 HOH A 185 685 19 HOH HOH . D 4 HOH A 186 686 355 HOH HOH . D 4 HOH A 187 687 236 HOH HOH . D 4 HOH A 188 688 271 HOH HOH . D 4 HOH A 189 689 238 HOH HOH . D 4 HOH A 190 690 89 HOH HOH . D 4 HOH A 191 691 7 HOH HOH . D 4 HOH A 192 692 364 HOH HOH . D 4 HOH A 193 693 317 HOH HOH . D 4 HOH A 194 694 291 HOH HOH . D 4 HOH A 195 695 296 HOH HOH . D 4 HOH A 196 696 320 HOH HOH . D 4 HOH A 197 697 24 HOH HOH . D 4 HOH A 198 698 313 HOH HOH . D 4 HOH A 199 699 182 HOH HOH . D 4 HOH A 200 700 230 HOH HOH . D 4 HOH A 201 701 336 HOH HOH . D 4 HOH A 202 702 63 HOH HOH . D 4 HOH A 203 703 21 HOH HOH . D 4 HOH A 204 704 37 HOH HOH . D 4 HOH A 205 705 53 HOH HOH . D 4 HOH A 206 706 345 HOH HOH . D 4 HOH A 207 707 303 HOH HOH . D 4 HOH A 208 708 349 HOH HOH . D 4 HOH A 209 709 139 HOH HOH . D 4 HOH A 210 710 304 HOH HOH . D 4 HOH A 211 711 212 HOH HOH . D 4 HOH A 212 712 353 HOH HOH . D 4 HOH A 213 713 72 HOH HOH . D 4 HOH A 214 714 330 HOH HOH . D 4 HOH A 215 715 328 HOH HOH . D 4 HOH A 216 716 48 HOH HOH . D 4 HOH A 217 717 362 HOH HOH . D 4 HOH A 218 718 26 HOH HOH . D 4 HOH A 219 719 82 HOH HOH . D 4 HOH A 220 720 332 HOH HOH . D 4 HOH A 221 721 342 HOH HOH . D 4 HOH A 222 722 179 HOH HOH . D 4 HOH A 223 723 120 HOH HOH . D 4 HOH A 224 724 102 HOH HOH . D 4 HOH A 225 725 209 HOH HOH . D 4 HOH A 226 726 286 HOH HOH . D 4 HOH A 227 727 318 HOH HOH . D 4 HOH A 228 728 348 HOH HOH . D 4 HOH A 229 729 79 HOH HOH . D 4 HOH A 230 730 347 HOH HOH . D 4 HOH A 231 731 324 HOH HOH . D 4 HOH A 232 732 252 HOH HOH . D 4 HOH A 233 733 228 HOH HOH . D 4 HOH A 234 734 185 HOH HOH . D 4 HOH A 235 735 257 HOH HOH . D 4 HOH A 236 736 154 HOH HOH . D 4 HOH A 237 737 294 HOH HOH . D 4 HOH A 238 738 40 HOH HOH . D 4 HOH A 239 739 287 HOH HOH . D 4 HOH A 240 740 105 HOH HOH . D 4 HOH A 241 741 143 HOH HOH . D 4 HOH A 242 742 300 HOH HOH . D 4 HOH A 243 743 283 HOH HOH . D 4 HOH A 244 744 239 HOH HOH . D 4 HOH A 245 745 343 HOH HOH . D 4 HOH A 246 746 295 HOH HOH . D 4 HOH A 247 747 278 HOH HOH . D 4 HOH A 248 748 350 HOH HOH . D 4 HOH A 249 749 65 HOH HOH . D 4 HOH A 250 750 183 HOH HOH . D 4 HOH A 251 751 298 HOH HOH . D 4 HOH A 252 752 237 HOH HOH . D 4 HOH A 253 753 235 HOH HOH . D 4 HOH A 254 754 282 HOH HOH . D 4 HOH A 255 755 213 HOH HOH . D 4 HOH A 256 756 306 HOH HOH . D 4 HOH A 257 757 288 HOH HOH . D 4 HOH A 258 758 260 HOH HOH . D 4 HOH A 259 759 310 HOH HOH . D 4 HOH A 260 760 258 HOH HOH . D 4 HOH A 261 761 202 HOH HOH . D 4 HOH A 262 762 211 HOH HOH . D 4 HOH A 263 763 277 HOH HOH . D 4 HOH A 264 764 359 HOH HOH . D 4 HOH A 265 765 87 HOH HOH . D 4 HOH A 266 766 360 HOH HOH . D 4 HOH A 267 767 321 HOH HOH . D 4 HOH A 268 768 301 HOH HOH . D 4 HOH A 269 769 281 HOH HOH . D 4 HOH A 270 770 351 HOH HOH . D 4 HOH A 271 771 234 HOH HOH . D 4 HOH A 272 772 331 HOH HOH . D 4 HOH A 273 773 363 HOH HOH . D 4 HOH A 274 774 297 HOH HOH . D 4 HOH A 275 775 250 HOH HOH . D 4 HOH A 276 776 311 HOH HOH . D 4 HOH A 277 777 312 HOH HOH . D 4 HOH A 278 778 322 HOH HOH . D 4 HOH A 279 779 190 HOH HOH . D 4 HOH A 280 780 308 HOH HOH . D 4 HOH A 281 781 285 HOH HOH . D 4 HOH A 282 782 326 HOH HOH . D 4 HOH A 283 783 325 HOH HOH . D 4 HOH A 284 784 319 HOH HOH . D 4 HOH A 285 785 323 HOH HOH . D 4 HOH A 286 786 307 HOH HOH . D 4 HOH A 287 787 327 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 2.353 _atom_site.Cartn_y 18.841 _atom_site.Cartn_z 15.406 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 46.31 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #