data_6NPU
#
_model_server_result.job_id            Yg2OHg5xJyGfaNxCmnKldA 
_model_server_result.datetime_utc      '2024-11-26 23:00:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6npu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":604}' 
#
_entry.id    6NPU 
#
_exptl.entry_id    6NPU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6NPU 
_cell.length_a            75.093 
_cell.length_b            95.643 
_cell.length_c            115.535 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6NPU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 G N N 
? 5 H N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 194 n n 
C1 C2 GOL sing 195 n n 
C1 H11 GOL sing 196 n n 
C1 H12 GOL sing 197 n n 
O1 HO1 GOL sing 198 n n 
C2 O2 GOL sing 199 n n 
C2 C3 GOL sing 200 n n 
C2 H2 GOL sing 201 n n 
O2 HO2 GOL sing 202 n n 
C3 O3 GOL sing 203 n n 
C3 H31 GOL sing 204 n n 
C3 H32 GOL sing 205 n n 
O3 HO3 GOL sing 206 n n 
#
_atom_sites.entry_id                     6NPU 
_atom_sites.fract_transf_matrix[1][1]    0.013317 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010456 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008655 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 STI A 1 601 3 STI STI . 
D 3 KWV A 1 602 542 KWV LIG . 
E 4 SO4 B 1 601 3 SO4 SO4 . 
F 2 STI B 1 602 4 STI STI . 
G 5 GOL B 1 603 359 GOL GOL . 
H 5 GOL B 1 604 359 GOL GOL . 
I 3 KWV B 1 605 530 KWV LIG . 
J 6 2PE B 1 606 170 2PE 2PE . 
K 7 HOH A 1 701 33 HOH HOH . 
K 7 HOH A 2 702 70 HOH HOH . 
K 7 HOH A 3 703 2 HOH HOH . 
K 7 HOH A 4 704 24 HOH HOH . 
K 7 HOH A 5 705 73 HOH HOH . 
K 7 HOH A 6 706 64 HOH HOH . 
K 7 HOH A 7 707 48 HOH HOH . 
K 7 HOH A 8 708 8 HOH HOH . 
K 7 HOH A 9 709 38 HOH HOH . 
K 7 HOH A 10 710 4 HOH HOH . 
K 7 HOH A 11 711 20 HOH HOH . 
K 7 HOH A 12 712 67 HOH HOH . 
K 7 HOH A 13 713 58 HOH HOH . 
K 7 HOH A 14 714 51 HOH HOH . 
K 7 HOH A 15 715 68 HOH HOH . 
K 7 HOH A 16 716 50 HOH HOH . 
K 7 HOH A 17 717 25 HOH HOH . 
K 7 HOH A 18 718 75 HOH HOH . 
K 7 HOH A 19 719 39 HOH HOH . 
K 7 HOH A 20 720 29 HOH HOH . 
K 7 HOH A 21 721 37 HOH HOH . 
K 7 HOH A 22 722 65 HOH HOH . 
K 7 HOH A 23 723 14 HOH HOH . 
K 7 HOH A 24 724 30 HOH HOH . 
K 7 HOH A 25 725 19 HOH HOH . 
K 7 HOH A 26 726 45 HOH HOH . 
K 7 HOH A 27 727 31 HOH HOH . 
K 7 HOH A 28 728 53 HOH HOH . 
K 7 HOH A 29 729 35 HOH HOH . 
K 7 HOH A 30 730 15 HOH HOH . 
K 7 HOH A 31 731 26 HOH HOH . 
K 7 HOH A 32 732 34 HOH HOH . 
K 7 HOH A 33 733 60 HOH HOH . 
K 7 HOH A 34 734 3 HOH HOH . 
K 7 HOH A 35 735 13 HOH HOH . 
K 7 HOH A 36 736 55 HOH HOH . 
K 7 HOH A 37 737 22 HOH HOH . 
K 7 HOH A 38 738 6 HOH HOH . 
K 7 HOH A 39 739 17 HOH HOH . 
K 7 HOH A 40 740 7 HOH HOH . 
K 7 HOH A 41 741 61 HOH HOH . 
K 7 HOH A 42 742 62 HOH HOH . 
L 7 HOH B 1 701 49 HOH HOH . 
L 7 HOH B 2 702 27 HOH HOH . 
L 7 HOH B 3 703 5 HOH HOH . 
L 7 HOH B 4 704 56 HOH HOH . 
L 7 HOH B 5 705 74 HOH HOH . 
L 7 HOH B 6 706 21 HOH HOH . 
L 7 HOH B 7 707 44 HOH HOH . 
L 7 HOH B 8 708 69 HOH HOH . 
L 7 HOH B 9 709 59 HOH HOH . 
L 7 HOH B 10 710 23 HOH HOH . 
L 7 HOH B 11 711 10 HOH HOH . 
L 7 HOH B 12 712 12 HOH HOH . 
L 7 HOH B 13 713 41 HOH HOH . 
L 7 HOH B 14 714 43 HOH HOH . 
L 7 HOH B 15 715 16 HOH HOH . 
L 7 HOH B 16 716 46 HOH HOH . 
L 7 HOH B 17 717 11 HOH HOH . 
L 7 HOH B 18 718 47 HOH HOH . 
L 7 HOH B 19 719 54 HOH HOH . 
L 7 HOH B 20 720 36 HOH HOH . 
L 7 HOH B 21 721 32 HOH HOH . 
L 7 HOH B 22 722 57 HOH HOH . 
L 7 HOH B 23 723 40 HOH HOH . 
L 7 HOH B 24 724 42 HOH HOH . 
L 7 HOH B 25 725 66 HOH HOH . 
L 7 HOH B 26 726 52 HOH HOH . 
L 7 HOH B 27 727 71 HOH HOH . 
L 7 HOH B 28 728 63 HOH HOH . 
L 7 HOH B 29 729 72 HOH HOH . 
L 7 HOH B 30 730 28 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 5 -9.335 22.95 -7.147 1 33.51 ? C1 GOL 604 B 1 
HETATM 2 O O1 GOL . . . H 5 -7.923 23.024 -7.203 1 30.57 ? O1 GOL 604 B 1 
HETATM 3 C C2 GOL . . . H 5 -9.759 21.412 -6.997 1 43.17 ? C2 GOL 604 B 1 
HETATM 4 O O2 GOL . . . H 5 -9.135 20.815 -5.911 1 43.56 ? O2 GOL 604 B 1 
HETATM 5 C C3 GOL . . . H 5 -11.353 21.368 -6.839 1 34.15 ? C3 GOL 604 B 1 
HETATM 6 O O3 GOL . . . H 5 -11.905 22.188 -7.876 1 40.39 ? O3 GOL 604 B 1 
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_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           257 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
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