data_6NQF # _model_server_result.job_id N5MZWqcOgEBL4ZxUOHIMFA _model_server_result.datetime_utc '2024-11-24 09:56:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6nqf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6NQF # _exptl.entry_id 6NQF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6NQF _cell.length_a 44.46 _cell.length_b 55.49 _cell.length_c 174.71 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NQF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 116 A ALA 96 1_555 A N SEP 117 A SEP 97 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C ALA 116 A ALA 96 1_555 A N SEP 117 A SEP 97 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C SEP 117 A SEP 97 1_555 A N HIS 118 A HIS 98 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C SEP 117 A SEP 97 1_555 A N HIS 118 A HIS 98 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.331 ? metalc ? metalc1 A OG SEP 117 A SEP 97 1_555 B CA CA . A CA 501 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.723 ? metalc ? metalc2 A OG SEP 117 A SEP 97 1_555 B CA CA . A CA 501 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc3 A O3P SEP 117 A SEP 97 1_555 B CA CA . A CA 501 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc4 A OD2 ASP 257 A ASP 237 1_555 B CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc5 A OD1 ASP 259 A ASP 239 1_555 B CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc6 A OD2 ASP 259 A ASP 239 1_555 B CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.107 ? metalc ? metalc7 A OD1 ASP 261 A ASP 241 1_555 B CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? metalc ? metalc8 B CA CA . A CA 501 1_555 C O HOH . A HOH 655 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.109 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6NQF _atom_sites.fract_transf_matrix[1][1] 0.022492 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018021 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005724 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 501 1 CA CA . C 3 HOH A 1 601 119 HOH HOH . C 3 HOH A 2 602 102 HOH HOH . C 3 HOH A 3 603 22 HOH HOH . C 3 HOH A 4 604 132 HOH HOH . C 3 HOH A 5 605 116 HOH HOH . C 3 HOH A 6 606 23 HOH HOH . C 3 HOH A 7 607 114 HOH HOH . C 3 HOH A 8 608 117 HOH HOH . C 3 HOH A 9 609 18 HOH HOH . C 3 HOH A 10 610 110 HOH HOH . C 3 HOH A 11 611 6 HOH HOH . C 3 HOH A 12 612 79 HOH HOH . C 3 HOH A 13 613 26 HOH HOH . C 3 HOH A 14 614 111 HOH HOH . C 3 HOH A 15 615 15 HOH HOH . C 3 HOH A 16 616 42 HOH HOH . C 3 HOH A 17 617 28 HOH HOH . C 3 HOH A 18 618 12 HOH HOH . C 3 HOH A 19 619 108 HOH HOH . C 3 HOH A 20 620 59 HOH HOH . C 3 HOH A 21 621 54 HOH HOH . C 3 HOH A 22 622 33 HOH HOH . C 3 HOH A 23 623 91 HOH HOH . C 3 HOH A 24 624 90 HOH HOH . C 3 HOH A 25 625 29 HOH HOH . C 3 HOH A 26 626 92 HOH HOH . C 3 HOH A 27 627 47 HOH HOH . C 3 HOH A 28 628 14 HOH HOH . C 3 HOH A 29 629 103 HOH HOH . C 3 HOH A 30 630 3 HOH HOH . C 3 HOH A 31 631 4 HOH HOH . C 3 HOH A 32 632 94 HOH HOH . C 3 HOH A 33 633 5 HOH HOH . C 3 HOH A 34 634 9 HOH HOH . C 3 HOH A 35 635 30 HOH HOH . C 3 HOH A 36 636 10 HOH HOH . C 3 HOH A 37 637 74 HOH HOH . C 3 HOH A 38 638 65 HOH HOH . C 3 HOH A 39 639 118 HOH HOH . C 3 HOH A 40 640 122 HOH HOH . C 3 HOH A 41 641 76 HOH HOH . C 3 HOH A 42 642 46 HOH HOH . C 3 HOH A 43 643 104 HOH HOH . C 3 HOH A 44 644 51 HOH HOH . C 3 HOH A 45 645 13 HOH HOH . C 3 HOH A 46 646 45 HOH HOH . C 3 HOH A 47 647 68 HOH HOH . C 3 HOH A 48 648 2 HOH HOH . C 3 HOH A 49 649 64 HOH HOH . C 3 HOH A 50 650 1 HOH HOH . C 3 HOH A 51 651 69 HOH HOH . C 3 HOH A 52 652 70 HOH HOH . C 3 HOH A 53 653 37 HOH HOH . C 3 HOH A 54 654 53 HOH HOH . C 3 HOH A 55 655 112 HOH HOH . C 3 HOH A 56 656 133 HOH HOH . C 3 HOH A 57 657 32 HOH HOH . C 3 HOH A 58 658 20 HOH HOH . C 3 HOH A 59 659 41 HOH HOH . C 3 HOH A 60 660 95 HOH HOH . C 3 HOH A 61 661 35 HOH HOH . C 3 HOH A 62 662 24 HOH HOH . C 3 HOH A 63 663 85 HOH HOH . C 3 HOH A 64 664 25 HOH HOH . C 3 HOH A 65 665 11 HOH HOH . C 3 HOH A 66 666 48 HOH HOH . C 3 HOH A 67 667 83 HOH HOH . C 3 HOH A 68 668 66 HOH HOH . C 3 HOH A 69 669 62 HOH HOH . C 3 HOH A 70 670 8 HOH HOH . C 3 HOH A 71 671 67 HOH HOH . C 3 HOH A 72 672 105 HOH HOH . C 3 HOH A 73 673 73 HOH HOH . C 3 HOH A 74 674 107 HOH HOH . C 3 HOH A 75 675 7 HOH HOH . C 3 HOH A 76 676 36 HOH HOH . C 3 HOH A 77 677 58 HOH HOH . C 3 HOH A 78 678 44 HOH HOH . C 3 HOH A 79 679 124 HOH HOH . C 3 HOH A 80 680 99 HOH HOH . C 3 HOH A 81 681 49 HOH HOH . C 3 HOH A 82 682 19 HOH HOH . C 3 HOH A 83 683 63 HOH HOH . C 3 HOH A 84 684 39 HOH HOH . C 3 HOH A 85 685 38 HOH HOH . C 3 HOH A 86 686 61 HOH HOH . C 3 HOH A 87 687 16 HOH HOH . C 3 HOH A 88 688 34 HOH HOH . C 3 HOH A 89 689 129 HOH HOH . C 3 HOH A 90 690 52 HOH HOH . C 3 HOH A 91 691 60 HOH HOH . C 3 HOH A 92 692 17 HOH HOH . C 3 HOH A 93 693 43 HOH HOH . C 3 HOH A 94 694 87 HOH HOH . C 3 HOH A 95 695 72 HOH HOH . C 3 HOH A 96 696 50 HOH HOH . C 3 HOH A 97 697 75 HOH HOH . C 3 HOH A 98 698 80 HOH HOH . C 3 HOH A 99 699 101 HOH HOH . C 3 HOH A 100 700 78 HOH HOH . C 3 HOH A 101 701 31 HOH HOH . C 3 HOH A 102 702 97 HOH HOH . C 3 HOH A 103 703 40 HOH HOH . C 3 HOH A 104 704 56 HOH HOH . C 3 HOH A 105 705 131 HOH HOH . C 3 HOH A 106 706 100 HOH HOH . C 3 HOH A 107 707 82 HOH HOH . C 3 HOH A 108 708 115 HOH HOH . C 3 HOH A 109 709 121 HOH HOH . C 3 HOH A 110 710 98 HOH HOH . C 3 HOH A 111 711 71 HOH HOH . C 3 HOH A 112 712 89 HOH HOH . C 3 HOH A 113 713 125 HOH HOH . C 3 HOH A 114 714 77 HOH HOH . C 3 HOH A 115 715 21 HOH HOH . C 3 HOH A 116 716 88 HOH HOH . C 3 HOH A 117 717 126 HOH HOH . C 3 HOH A 118 718 81 HOH HOH . C 3 HOH A 119 719 109 HOH HOH . C 3 HOH A 120 720 96 HOH HOH . C 3 HOH A 121 721 27 HOH HOH . C 3 HOH A 122 722 113 HOH HOH . C 3 HOH A 123 723 57 HOH HOH . C 3 HOH A 124 724 120 HOH HOH . C 3 HOH A 125 725 130 HOH HOH . C 3 HOH A 126 726 127 HOH HOH . C 3 HOH A 127 727 84 HOH HOH . C 3 HOH A 128 728 106 HOH HOH . C 3 HOH A 129 729 86 HOH HOH . C 3 HOH A 130 730 128 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 29.613 _atom_site.Cartn_y 45.146 _atom_site.Cartn_z 23.715 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.96 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #