data_6NQM
#
_model_server_result.job_id            A6lc9eLGHgINZz8yktYPNw 
_model_server_result.datetime_utc      '2024-12-23 05:36:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6nqm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":901}' 
#
_entry.id    6NQM 
#
_exptl.entry_id    6NQM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6NQM 
_cell.length_a            189.401 
_cell.length_b            189.401 
_cell.length_c            107.104 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6NQM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     6NQM 
_atom_sites.fract_transf_matrix[1][1]    0.00528 
_atom_sites.fract_transf_matrix[1][2]    0.003048 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006097 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009337 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          B 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           FAD 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      901 
_pdbx_nonpoly_scheme.auth_seq_num     2762 
_pdbx_nonpoly_scheme.pdb_mon_id       FAD 
_pdbx_nonpoly_scheme.auth_mon_id      FAD 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . B 2 22.63 43.611 55.36 1 43.7 ? PA FAD 901 A 1 
HETATM 2 O O1A FAD . . . B 2 23.14 44.785 56.114 1 47.57 ? O1A FAD 901 A 1 
HETATM 3 O O2A FAD . . . B 2 23.717 42.696 54.778 1 53.78 ? O2A FAD 901 A 1 
HETATM 4 O O5B FAD . . . B 2 21.641 42.756 56.229 1 50.24 ? O5B FAD 901 A 1 
HETATM 5 C C5B FAD . . . B 2 21.488 41.338 56.011 1 56.42 ? C5B FAD 901 A 1 
HETATM 6 C C4B FAD . . . B 2 21.675 40.624 57.327 1 45.09 ? C4B FAD 901 A 1 
HETATM 7 O O4B FAD . . . B 2 21.421 39.212 57.149 1 44.46 ? O4B FAD 901 A 1 
HETATM 8 C C3B FAD . . . B 2 23.077 40.744 57.929 1 56.78 ? C3B FAD 901 A 1 
HETATM 9 O O3B FAD . . . B 2 23.011 41.12 59.301 1 64.52 ? O3B FAD 901 A 1 
HETATM 10 C C2B FAD . . . B 2 23.658 39.336 57.763 1 58.83 ? C2B FAD 901 A 1 
HETATM 11 O O2B FAD . . . B 2 24.567 38.98 58.797 1 62.2 ? O2B FAD 901 A 1 
HETATM 12 C C1B FAD . . . B 2 22.392 38.493 57.869 1 59.97 ? C1B FAD 901 A 1 
HETATM 13 N N9A FAD . . . B 2 22.514 37.157 57.302 1 61.48 ? N9A FAD 901 A 1 
HETATM 14 C C8A FAD . . . B 2 23.266 36.773 56.227 1 60.68 ? C8A FAD 901 A 1 
HETATM 15 N N7A FAD . . . B 2 23.19 35.49 55.955 1 57.94 ? N7A FAD 901 A 1 
HETATM 16 C C5A FAD . . . B 2 22.336 35.002 56.922 1 61.34 ? C5A FAD 901 A 1 
HETATM 17 C C6A FAD . . . B 2 21.837 33.706 57.191 1 62.88 ? C6A FAD 901 A 1 
HETATM 18 N N6A FAD . . . B 2 22.154 32.63 56.466 1 72.21 ? N6A FAD 901 A 1 
HETATM 19 N N1A FAD . . . B 2 20.997 33.561 58.237 1 66.49 ? N1A FAD 901 A 1 
HETATM 20 C C2A FAD . . . B 2 20.677 34.632 58.967 1 61.7 ? C2A FAD 901 A 1 
HETATM 21 N N3A FAD . . . B 2 21.082 35.896 58.809 1 54.48 ? N3A FAD 901 A 1 
HETATM 22 C C4A FAD . . . B 2 21.907 36.01 57.77 1 59.89 ? C4A FAD 901 A 1 
HETATM 23 N N1 FAD . . . B 2 25.608 52.39 51.872 1 41.32 ? N1 FAD 901 A 1 
HETATM 24 C C2 FAD . . . B 2 25.414 53.74 51.949 1 39.52 ? C2 FAD 901 A 1 
HETATM 25 O O2 FAD . . . B 2 24.289 54.242 51.848 1 52.38 ? O2 FAD 901 A 1 
HETATM 26 N N3 FAD . . . B 2 26.498 54.579 52.141 1 42.79 ? N3 FAD 901 A 1 
HETATM 27 C C4 FAD . . . B 2 27.815 54.183 52.271 1 44.53 ? C4 FAD 901 A 1 
HETATM 28 O O4 FAD . . . B 2 28.702 55.018 52.439 1 48.63 ? O4 FAD 901 A 1 
HETATM 29 C C4X FAD . . . B 2 28.011 52.751 52.181 1 43.79 ? C4X FAD 901 A 1 
HETATM 30 N N5 FAD . . . B 2 29.228 52.291 52.293 1 49.09 ? N5 FAD 901 A 1 
HETATM 31 C C5X FAD . . . B 2 29.416 50.922 52.221 1 44.69 ? C5X FAD 901 A 1 
HETATM 32 C C6 FAD . . . B 2 30.711 50.415 52.344 1 43.82 ? C6 FAD 901 A 1 
HETATM 33 C C7 FAD . . . B 2 30.956 49.047 52.273 1 43.39 ? C7 FAD 901 A 1 
HETATM 34 C C7M FAD . . . B 2 32.364 48.534 52.411 1 50.51 ? C7M FAD 901 A 1 
HETATM 35 C C8 FAD . . . B 2 29.882 48.165 52.08 1 48.85 ? C8 FAD 901 A 1 
HETATM 36 C C8M FAD . . . B 2 30.108 46.678 52.006 1 54.24 ? C8M FAD 901 A 1 
HETATM 37 C C9 FAD . . . B 2 28.592 48.665 51.961 1 45.29 ? C9 FAD 901 A 1 
HETATM 38 C C9A FAD . . . B 2 28.348 50.034 52.029 1 45.48 ? C9A FAD 901 A 1 
HETATM 39 N N10 FAD . . . B 2 27.045 50.573 51.928 1 44.13 ? N10 FAD 901 A 1 
HETATM 40 C C10 FAD . . . B 2 26.844 51.931 51.987 1 38.88 ? C10 FAD 901 A 1 
HETATM 41 C C1' FAD . . . B 2 25.887 49.698 51.689 1 46.4 ? C1' FAD 901 A 1 
HETATM 42 C C2' FAD . . . B 2 24.959 49.547 52.904 1 51.2 ? C2' FAD 901 A 1 
HETATM 43 O O2' FAD . . . B 2 25.65 48.945 53.999 1 44.69 ? O2' FAD 901 A 1 
HETATM 44 C C3' FAD . . . B 2 23.785 48.651 52.502 1 62.41 ? C3' FAD 901 A 1 
HETATM 45 O O3' FAD . . . B 2 23.07 49.309 51.459 1 49.15 ? O3' FAD 901 A 1 
HETATM 46 C C4' FAD . . . B 2 22.809 48.277 53.618 1 59.03 ? C4' FAD 901 A 1 
HETATM 47 O O4' FAD . . . B 2 23.531 48.03 54.823 1 70.85 ? O4' FAD 901 A 1 
HETATM 48 C C5' FAD . . . B 2 21.99 47.059 53.238 1 52.7 ? C5' FAD 901 A 1 
HETATM 49 O O5' FAD . . . B 2 21.358 46.52 54.418 1 59.82 ? O5' FAD 901 A 1 
HETATM 50 P P FAD . . . B 2 20.553 45.168 54.36 1 64.13 ? P FAD 901 A 1 
HETATM 51 O O1P FAD . . . B 2 19.856 44.884 55.696 1 50.41 ? O1P FAD 901 A 1 
HETATM 52 O O2P FAD . . . B 2 19.655 45.161 53.18 1 52.41 ? O2P FAD 901 A 1 
HETATM 53 O O3P FAD . . . B 2 21.704 44.097 54.169 1 61.43 ? O3P FAD 901 A 1 
HETATM 54 H H51A FAD . . . B 2 20.63 41.161 55.675 1 68.18 ? H51A FAD 901 A 1 
HETATM 55 H H52A FAD . . . B 2 22.133 41.041 55.397 1 68.18 ? H52A FAD 901 A 1 
HETATM 56 H H4B FAD . . . B 2 21.058 40.947 57.959 1 54.58 ? H4B FAD 901 A 1 
HETATM 57 H H3B FAD . . . B 2 23.581 41.359 57.43 1 68.61 ? H3B FAD 901 A 1 
HETATM 58 H HO3A FAD . . . B 2 23.694 40.854 59.695 1 77.9 ? HO3A FAD 901 A 1 
HETATM 59 H H2B FAD . . . B 2 24.068 39.253 56.922 1 71.07 ? H2B FAD 901 A 1 
HETATM 60 H HO2A FAD . . . B 2 25.12 39.592 58.903 1 75.12 ? HO2A FAD 901 A 1 
HETATM 61 H H1B FAD . . . B 2 22.129 38.413 58.766 1 72.45 ? H1B FAD 901 A 1 
HETATM 62 H H8A FAD . . . B 2 23.781 37.366 55.73 1 73.3 ? H8A FAD 901 A 1 
HETATM 63 H H61A FAD . . . B 2 21.834 31.852 56.68 1 87.13 ? H61A FAD 901 A 1 
HETATM 64 H H62A FAD . . . B 2 22.68 32.708 55.78 1 87.13 ? H62A FAD 901 A 1 
HETATM 65 H H2A FAD . . . B 2 20.096 34.482 59.676 1 74.52 ? H2A FAD 901 A 1 
HETATM 66 H HN3 FAD . . . B 2 26.332 55.43 52.182 1 51.83 ? HN3 FAD 901 A 1 
HETATM 67 H H6 FAD . . . B 2 31.313 51.111 52.469 1 53.06 ? H6 FAD 901 A 1 
HETATM 68 H HM71 FAD . . . B 2 32.359 47.733 52.9 1 61.09 ? HM71 FAD 901 A 1 
HETATM 69 H HM72 FAD . . . B 2 32.726 48.379 51.559 1 61.09 ? HM72 FAD 901 A 1 
HETATM 70 H HM73 FAD . . . B 2 32.886 49.172 52.861 1 61.09 ? HM73 FAD 901 A 1 
HETATM 71 H HM81 FAD . . . B 2 30.849 46.501 51.457 1 65.57 ? HM81 FAD 901 A 1 
HETATM 72 H HM82 FAD . . . B 2 30.271 46.343 52.868 1 65.57 ? HM82 FAD 901 A 1 
HETATM 73 H HM83 FAD . . . B 2 29.346 46.263 51.647 1 65.57 ? HM83 FAD 901 A 1 
HETATM 74 H H9 FAD . . . B 2 28.134 47.978 51.536 1 54.82 ? H9 FAD 901 A 1 
HETATM 75 H "H1'1" FAD . . . B 2 26.203 48.846 51.451 1 56.16 ? "H1'1" FAD 901 A 1 
HETATM 76 H "H1'2" FAD . . . B 2 25.388 50.056 50.978 1 56.16 ? "H1'2" FAD 901 A 1 
HETATM 77 H H2' FAD . . . B 2 24.648 50.393 53.169 1 61.92 ? H2' FAD 901 A 1 
HETATM 78 H HO2' FAD . . . B 2 25.134 48.873 54.647 1 54.11 ? HO2' FAD 901 A 1 
HETATM 79 H H3' FAD . . . B 2 24.143 47.844 52.182 1 75.37 ? H3' FAD 901 A 1 
HETATM 80 H HO3' FAD . . . B 2 22.321 48.957 51.373 1 59.46 ? HO3' FAD 901 A 1 
HETATM 81 H H4' FAD . . . B 2 22.235 49.002 53.777 1 71.31 ? H4' FAD 901 A 1 
HETATM 82 H HO4' FAD . . . B 2 23.026 47.672 55.381 1 85.5 ? HO4' FAD 901 A 1 
HETATM 83 H "H5'1" FAD . . . B 2 22.552 46.41 52.859 1 63.71 ? "H5'1" FAD 901 A 1 
HETATM 84 H "H5'2" FAD . . . B 2 21.333 47.306 52.615 1 63.71 ? "H5'2" FAD 901 A 1 
#
_model_server_stats.io_time_ms              55 
_model_server_stats.parse_time_ms           45 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           242 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           84 
#