data_6NU6
#
_model_server_result.job_id            InnCXfyT-LFBlOpRUYEmpQ 
_model_server_result.datetime_utc      '2025-04-27 11:58:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6nu6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":302}' 
#
_entry.id    6NU6 
#
_exptl.entry_id    6NU6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              276.285 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '4-[(1S,2R)-2-(carboxymethyl)cyclopentane-1-carbonyl]benzoic acid' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6NU6 
_cell.length_a            54.797 
_cell.length_b            105.593 
_cell.length_c            152.523 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6NU6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,J,Q,R 1 1 
C,D,K,L,M,N,O,P,S,T 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 I N N 
? 3 L N N 
? 3 O N N 
#
_chem_comp.formula           'C15 H16 O5' 
_chem_comp.formula_weight    276.285 
_chem_comp.id                L1Y 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4-[(1S,2R)-2-(carboxymethyl)cyclopentane-1-carbonyl]benzoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O17 C09 L1Y doub 210 n n 
O16 C07 L1Y doub 211 n n 
C08 C09 L1Y sing 212 n n 
C08 C11 L1Y sing 213 n n 
C09 O15 L1Y sing 214 n n 
C07 C10 L1Y sing 215 n n 
C07 C05 L1Y sing 216 n n 
C10 C11 L1Y sing 217 n n 
C10 C12 L1Y sing 218 n n 
C06 C05 L1Y doub 219 n y 
C06 C01 L1Y sing 220 n y 
C11 C14 L1Y sing 221 n n 
C12 C13 L1Y sing 222 n n 
C05 C04 L1Y sing 223 n y 
C13 C14 L1Y sing 224 n n 
C01 C02 L1Y doub 225 n y 
C04 C03 L1Y doub 226 n y 
C02 C03 L1Y sing 227 n y 
C02 C18 L1Y sing 228 n n 
O20 C18 L1Y doub 229 n n 
C18 O19 L1Y sing 230 n n 
C10 H1 L1Y sing 231 n n 
C12 H2 L1Y sing 232 n n 
C12 H3 L1Y sing 233 n n 
C14 H4 L1Y sing 234 n n 
C14 H5 L1Y sing 235 n n 
C01 H6 L1Y sing 236 n n 
C03 H7 L1Y sing 237 n n 
C04 H8 L1Y sing 238 n n 
C06 H9 L1Y sing 239 n n 
C08 H10 L1Y sing 240 n n 
C08 H11 L1Y sing 241 n n 
C11 H12 L1Y sing 242 n n 
C13 H13 L1Y sing 243 n n 
C13 H14 L1Y sing 244 n n 
O15 H15 L1Y sing 245 n n 
O19 H16 L1Y sing 246 n n 
#
_atom_sites.entry_id                     6NU6 
_atom_sites.fract_transf_matrix[1][1]    0.018249 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00947 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006556 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 L1V A 1 301 301 L1V 5RS . 
F 3 L1Y A 1 302 401 L1Y 5SR . 
G 4 SO4 A 1 303 2 SO4 SO4 . 
H 2 L1V B 1 301 301 L1V 5RS . 
I 3 L1Y B 1 302 401 L1Y 5SR . 
J 4 SO4 B 1 303 5 SO4 SO4 . 
K 2 L1V C 1 301 301 L1V 5RS . 
L 3 L1Y C 1 302 401 L1Y 5SR . 
M 4 SO4 C 1 303 4 SO4 SO4 . 
N 2 L1V D 1 301 301 L1V 5RS . 
O 3 L1Y D 1 302 401 L1Y 5SR . 
P 4 SO4 D 1 303 3 SO4 SO4 . 
Q 5 HOH A 1 401 73 HOH HOH . 
Q 5 HOH A 2 402 75 HOH HOH . 
Q 5 HOH A 3 403 61 HOH HOH . 
Q 5 HOH A 4 404 131 HOH HOH . 
Q 5 HOH A 5 405 1 HOH HOH . 
Q 5 HOH A 6 406 90 HOH HOH . 
Q 5 HOH A 7 407 32 HOH HOH . 
Q 5 HOH A 8 408 95 HOH HOH . 
Q 5 HOH A 9 409 23 HOH HOH . 
Q 5 HOH A 10 410 149 HOH HOH . 
Q 5 HOH A 11 411 58 HOH HOH . 
Q 5 HOH A 12 412 60 HOH HOH . 
Q 5 HOH A 13 413 145 HOH HOH . 
Q 5 HOH A 14 414 64 HOH HOH . 
Q 5 HOH A 15 415 83 HOH HOH . 
Q 5 HOH A 16 416 156 HOH HOH . 
Q 5 HOH A 17 417 5 HOH HOH . 
Q 5 HOH A 18 418 19 HOH HOH . 
Q 5 HOH A 19 419 7 HOH HOH . 
Q 5 HOH A 20 420 71 HOH HOH . 
Q 5 HOH A 21 421 72 HOH HOH . 
Q 5 HOH A 22 422 10 HOH HOH . 
Q 5 HOH A 23 423 67 HOH HOH . 
Q 5 HOH A 24 424 47 HOH HOH . 
Q 5 HOH A 25 425 8 HOH HOH . 
Q 5 HOH A 26 426 94 HOH HOH . 
Q 5 HOH A 27 427 88 HOH HOH . 
Q 5 HOH A 28 428 174 HOH HOH . 
Q 5 HOH A 29 429 81 HOH HOH . 
Q 5 HOH A 30 430 50 HOH HOH . 
Q 5 HOH A 31 431 89 HOH HOH . 
Q 5 HOH A 32 432 117 HOH HOH . 
Q 5 HOH A 33 433 137 HOH HOH . 
Q 5 HOH A 34 434 21 HOH HOH . 
Q 5 HOH A 35 435 173 HOH HOH . 
Q 5 HOH A 36 436 35 HOH HOH . 
Q 5 HOH A 37 437 66 HOH HOH . 
Q 5 HOH A 38 438 11 HOH HOH . 
Q 5 HOH A 39 439 62 HOH HOH . 
Q 5 HOH A 40 440 4 HOH HOH . 
Q 5 HOH A 41 441 148 HOH HOH . 
Q 5 HOH A 42 442 128 HOH HOH . 
Q 5 HOH A 43 443 147 HOH HOH . 
Q 5 HOH A 44 444 132 HOH HOH . 
Q 5 HOH A 45 445 146 HOH HOH . 
R 5 HOH B 1 401 111 HOH HOH . 
R 5 HOH B 2 402 158 HOH HOH . 
R 5 HOH B 3 403 53 HOH HOH . 
R 5 HOH B 4 404 18 HOH HOH . 
R 5 HOH B 5 405 80 HOH HOH . 
R 5 HOH B 6 406 82 HOH HOH . 
R 5 HOH B 7 407 135 HOH HOH . 
R 5 HOH B 8 408 9 HOH HOH . 
R 5 HOH B 9 409 84 HOH HOH . 
R 5 HOH B 10 410 40 HOH HOH . 
R 5 HOH B 11 411 54 HOH HOH . 
R 5 HOH B 12 412 33 HOH HOH . 
R 5 HOH B 13 413 6 HOH HOH . 
R 5 HOH B 14 414 142 HOH HOH . 
R 5 HOH B 15 415 20 HOH HOH . 
R 5 HOH B 16 416 37 HOH HOH . 
R 5 HOH B 17 417 29 HOH HOH . 
R 5 HOH B 18 418 78 HOH HOH . 
R 5 HOH B 19 419 101 HOH HOH . 
R 5 HOH B 20 420 87 HOH HOH . 
R 5 HOH B 21 421 127 HOH HOH . 
R 5 HOH B 22 422 109 HOH HOH . 
R 5 HOH B 23 423 13 HOH HOH . 
R 5 HOH B 24 424 24 HOH HOH . 
R 5 HOH B 25 425 76 HOH HOH . 
R 5 HOH B 26 426 48 HOH HOH . 
R 5 HOH B 27 427 98 HOH HOH . 
R 5 HOH B 28 428 25 HOH HOH . 
R 5 HOH B 29 429 14 HOH HOH . 
R 5 HOH B 30 430 55 HOH HOH . 
R 5 HOH B 31 431 65 HOH HOH . 
R 5 HOH B 32 432 153 HOH HOH . 
R 5 HOH B 33 433 106 HOH HOH . 
R 5 HOH B 34 434 133 HOH HOH . 
R 5 HOH B 35 435 129 HOH HOH . 
R 5 HOH B 36 436 26 HOH HOH . 
R 5 HOH B 37 437 91 HOH HOH . 
R 5 HOH B 38 438 30 HOH HOH . 
R 5 HOH B 39 439 59 HOH HOH . 
R 5 HOH B 40 440 114 HOH HOH . 
R 5 HOH B 41 441 22 HOH HOH . 
R 5 HOH B 42 442 118 HOH HOH . 
R 5 HOH B 43 443 27 HOH HOH . 
R 5 HOH B 44 444 15 HOH HOH . 
R 5 HOH B 45 445 39 HOH HOH . 
R 5 HOH B 46 446 110 HOH HOH . 
R 5 HOH B 47 447 70 HOH HOH . 
R 5 HOH B 48 448 116 HOH HOH . 
R 5 HOH B 49 449 141 HOH HOH . 
R 5 HOH B 50 450 122 HOH HOH . 
R 5 HOH B 51 451 120 HOH HOH . 
R 5 HOH B 52 452 151 HOH HOH . 
R 5 HOH B 53 453 125 HOH HOH . 
R 5 HOH B 54 454 150 HOH HOH . 
R 5 HOH B 55 455 154 HOH HOH . 
R 5 HOH B 56 456 74 HOH HOH . 
R 5 HOH B 57 457 175 HOH HOH . 
R 5 HOH B 58 458 157 HOH HOH . 
R 5 HOH B 59 459 79 HOH HOH . 
R 5 HOH B 60 460 152 HOH HOH . 
R 5 HOH B 61 461 159 HOH HOH . 
R 5 HOH B 62 462 155 HOH HOH . 
R 5 HOH B 63 463 140 HOH HOH . 
S 5 HOH C 1 401 161 HOH HOH . 
S 5 HOH C 2 402 160 HOH HOH . 
S 5 HOH C 3 403 44 HOH HOH . 
S 5 HOH C 4 404 144 HOH HOH . 
S 5 HOH C 5 405 100 HOH HOH . 
S 5 HOH C 6 406 143 HOH HOH . 
S 5 HOH C 7 407 121 HOH HOH . 
S 5 HOH C 8 408 28 HOH HOH . 
S 5 HOH C 9 409 57 HOH HOH . 
S 5 HOH C 10 410 77 HOH HOH . 
S 5 HOH C 11 411 85 HOH HOH . 
S 5 HOH C 12 412 2 HOH HOH . 
S 5 HOH C 13 413 36 HOH HOH . 
S 5 HOH C 14 414 12 HOH HOH . 
S 5 HOH C 15 415 105 HOH HOH . 
S 5 HOH C 16 416 68 HOH HOH . 
S 5 HOH C 17 417 130 HOH HOH . 
S 5 HOH C 18 418 92 HOH HOH . 
S 5 HOH C 19 419 102 HOH HOH . 
S 5 HOH C 20 420 162 HOH HOH . 
S 5 HOH C 21 421 63 HOH HOH . 
S 5 HOH C 22 422 51 HOH HOH . 
S 5 HOH C 23 423 104 HOH HOH . 
S 5 HOH C 24 424 96 HOH HOH . 
S 5 HOH C 25 425 164 HOH HOH . 
S 5 HOH C 26 426 139 HOH HOH . 
S 5 HOH C 27 427 126 HOH HOH . 
S 5 HOH C 28 428 136 HOH HOH . 
S 5 HOH C 29 429 163 HOH HOH . 
T 5 HOH D 1 401 165 HOH HOH . 
T 5 HOH D 2 402 107 HOH HOH . 
T 5 HOH D 3 403 46 HOH HOH . 
T 5 HOH D 4 404 108 HOH HOH . 
T 5 HOH D 5 405 171 HOH HOH . 
T 5 HOH D 6 406 49 HOH HOH . 
T 5 HOH D 7 407 31 HOH HOH . 
T 5 HOH D 8 408 16 HOH HOH . 
T 5 HOH D 9 409 86 HOH HOH . 
T 5 HOH D 10 410 97 HOH HOH . 
T 5 HOH D 11 411 56 HOH HOH . 
T 5 HOH D 12 412 42 HOH HOH . 
T 5 HOH D 13 413 41 HOH HOH . 
T 5 HOH D 14 414 69 HOH HOH . 
T 5 HOH D 15 415 124 HOH HOH . 
T 5 HOH D 16 416 17 HOH HOH . 
T 5 HOH D 17 417 3 HOH HOH . 
T 5 HOH D 18 418 166 HOH HOH . 
T 5 HOH D 19 419 103 HOH HOH . 
T 5 HOH D 20 420 34 HOH HOH . 
T 5 HOH D 21 421 99 HOH HOH . 
T 5 HOH D 22 422 43 HOH HOH . 
T 5 HOH D 23 423 45 HOH HOH . 
T 5 HOH D 24 424 134 HOH HOH . 
T 5 HOH D 25 425 170 HOH HOH . 
T 5 HOH D 26 426 169 HOH HOH . 
T 5 HOH D 27 427 38 HOH HOH . 
T 5 HOH D 28 428 119 HOH HOH . 
T 5 HOH D 29 429 138 HOH HOH . 
T 5 HOH D 30 430 112 HOH HOH . 
T 5 HOH D 31 431 172 HOH HOH . 
T 5 HOH D 32 432 176 HOH HOH . 
T 5 HOH D 33 433 115 HOH HOH . 
T 5 HOH D 34 434 93 HOH HOH . 
T 5 HOH D 35 435 52 HOH HOH . 
T 5 HOH D 36 436 168 HOH HOH . 
T 5 HOH D 37 437 113 HOH HOH . 
T 5 HOH D 38 438 167 HOH HOH . 
T 5 HOH D 39 439 123 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 L1Y . B . L 3 71.354 94.934 20.401 0.23 62.18 ? C10 L1Y 302 C 1 
HETATM 2 C C12 L1Y . B . L 3 70.051 93.935 19.952 0.23 63.5 ? C12 L1Y 302 C 1 
HETATM 3 C C14 L1Y . B . L 3 72.052 92.655 20.326 0.23 62.31 ? C14 L1Y 302 C 1 
HETATM 4 O O17 L1Y . B . L 3 75.055 96.527 21.016 0.23 58.54 ? O17 L1Y 302 C 1 
HETATM 5 C C01 L1Y . B . L 3 70.29 98.724 16.539 0.23 58.79 ? C01 L1Y 302 C 1 
HETATM 6 C C02 L1Y . B . L 3 70.111 97.678 15.419 0.23 61.22 ? C02 L1Y 302 C 1 
HETATM 7 C C03 L1Y . B . L 3 70.357 96.161 15.718 0.23 61.23 ? C03 L1Y 302 C 1 
HETATM 8 C C04 L1Y . B . L 3 70.782 95.676 17.12 0.23 62.71 ? C04 L1Y 302 C 1 
HETATM 9 C C05 L1Y . B . L 3 70.956 96.716 18.256 0.23 62.58 ? C05 L1Y 302 C 1 
HETATM 10 C C06 L1Y . B . L 3 70.713 98.236 17.95 0.23 60.07 ? C06 L1Y 302 C 1 
HETATM 11 C C07 L1Y . B . L 3 71.396 96.327 19.722 0.23 58.77 ? C07 L1Y 302 C 1 
HETATM 12 C C08 L1Y . B . L 3 73.605 94.619 21.01 0.23 60.57 ? C08 L1Y 302 C 1 
HETATM 13 C C09 L1Y . B . L 3 74.474 95.663 20.306 0.23 61.1 ? C09 L1Y 302 C 1 
HETATM 14 C C11 L1Y . B . L 3 72.447 94.236 20.07 0.23 60.44 ? C11 L1Y 302 C 1 
HETATM 15 C C13 L1Y . B . L 3 70.493 92.603 20.039 0.23 60.7 ? C13 L1Y 302 C 1 
HETATM 16 C C18 L1Y . B . L 3 69.686 98.12 14 0.23 57.45 ? C18 L1Y 302 C 1 
HETATM 17 O O15 L1Y . B . L 3 74.617 95.654 19.029 0.23 56.16 ? O15 L1Y 302 C 1 
HETATM 18 O O16 L1Y . B . L 3 71.833 97.221 20.362 0.23 57.72 ? O16 L1Y 302 C 1 
HETATM 19 O O19 L1Y . B . L 3 70.125 99.208 13.524 0.23 54.28 ? O19 L1Y 302 C 1 
HETATM 20 O O20 L1Y . B . L 3 68.892 97.378 13.324 0.23 56.09 ? O20 L1Y 302 C 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    36 
_model_server_stats.query_time_ms           373 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           20 
#