data_6NVL # _model_server_result.job_id A3X24SkSv-04uIVxzt8ONA _model_server_result.datetime_utc '2024-10-11 01:20:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6nvl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":801}' # _entry.id 6NVL # _exptl.entry_id 6NVL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.6 _cell.angle_gamma 90 _cell.entry_id 6NVL _cell.length_a 93.331 _cell.length_b 83.701 _cell.length_c 102.604 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NVL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,N 1 1 B,G,H,O 2 1 C,I,P 3 1 D,J,K,L,M,Q 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 J N N ? 2 K N N ? 2 L N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 32 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 488 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id F _struct_conn.ptnr2_label_atom_id C23 _struct_conn.ptnr2_label_comp_id XL6 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id XL6 _struct_conn.ptnr2_auth_seq_id 802 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.828 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 6NVL _atom_sites.fract_transf_matrix[1][1] 0.010715 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004681 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011947 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010636 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SO4 A 1 801 802 SO4 SO4 . F 3 XL6 A 1 802 1 XL6 XL6 . G 2 SO4 B 1 801 802 SO4 SO4 . H 3 XL6 B 1 802 3 XL6 XL6 . I 3 XL6 C 1 801 2 XL6 XL6 . J 2 SO4 D 1 801 802 SO4 SO4 . K 2 SO4 D 1 802 803 SO4 SO4 . L 2 SO4 D 1 803 804 SO4 SO4 . M 3 XL6 D 1 804 4 XL6 XL6 . N 4 HOH A 1 901 901 HOH HOH . N 4 HOH A 2 902 903 HOH HOH . N 4 HOH A 3 903 902 HOH HOH . N 4 HOH A 4 904 905 HOH HOH . N 4 HOH A 5 905 904 HOH HOH . N 4 HOH A 6 906 907 HOH HOH . N 4 HOH A 7 907 906 HOH HOH . N 4 HOH A 8 908 908 HOH HOH . N 4 HOH A 9 909 909 HOH HOH . N 4 HOH A 10 910 910 HOH HOH . N 4 HOH A 11 911 911 HOH HOH . O 4 HOH B 1 901 911 HOH HOH . O 4 HOH B 2 902 909 HOH HOH . O 4 HOH B 3 903 901 HOH HOH . O 4 HOH B 4 904 902 HOH HOH . O 4 HOH B 5 905 905 HOH HOH . O 4 HOH B 6 906 904 HOH HOH . O 4 HOH B 7 907 907 HOH HOH . O 4 HOH B 8 908 903 HOH HOH . O 4 HOH B 9 909 906 HOH HOH . O 4 HOH B 10 910 908 HOH HOH . O 4 HOH B 11 911 910 HOH HOH . O 4 HOH B 12 912 912 HOH HOH . O 4 HOH B 13 913 915 HOH HOH . O 4 HOH B 14 914 913 HOH HOH . O 4 HOH B 15 915 914 HOH HOH . O 4 HOH B 16 916 916 HOH HOH . P 4 HOH C 1 901 901 HOH HOH . P 4 HOH C 2 902 902 HOH HOH . P 4 HOH C 3 903 904 HOH HOH . P 4 HOH C 4 904 905 HOH HOH . P 4 HOH C 5 905 903 HOH HOH . Q 4 HOH D 1 901 901 HOH HOH . Q 4 HOH D 2 902 902 HOH HOH . Q 4 HOH D 3 903 904 HOH HOH . Q 4 HOH D 4 904 903 HOH HOH . Q 4 HOH D 5 905 905 HOH HOH . Q 4 HOH D 6 906 907 HOH HOH . Q 4 HOH D 7 907 908 HOH HOH . Q 4 HOH D 8 908 906 HOH HOH . Q 4 HOH D 9 909 909 HOH HOH . Q 4 HOH D 10 910 910 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . J 2 90.301 8.167 93.312 1 51.19 ? S SO4 801 D 1 HETATM 2 O O1 SO4 . . . J 2 90.726 9.108 92.306 1 48.68 ? O1 SO4 801 D 1 HETATM 3 O O2 SO4 . . . J 2 90.969 6.911 93.102 1 52.11 ? O2 SO4 801 D 1 HETATM 4 O O3 SO4 . . . J 2 88.883 7.975 93.217 1 51.45 ? O3 SO4 801 D 1 HETATM 5 O O4 SO4 . . . J 2 90.621 8.661 94.627 1 49.21 ? O4 SO4 801 D 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #