data_6NVQ
#
_model_server_result.job_id            uIlE6aGmJAUh5e7BttpYrw 
_model_server_result.datetime_utc      '2024-11-08 07:39:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6nvq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    6NVQ 
#
_exptl.entry_id    6NVQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6NVQ 
_cell.length_a            70.453 
_cell.length_b            128.929 
_cell.length_c            45.222 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6NVQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     6NVQ 
_atom_sites.fract_transf_matrix[1][1]    0.014194 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007756 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022113 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GOL C 1 401 401 GOL GOL . 
D 3 GOL C 1 402 501 GOL GOL . 
E 4 HOH C 1 501 42 HOH HOH . 
E 4 HOH C 2 502 127 HOH HOH . 
E 4 HOH C 3 503 34 HOH HOH . 
E 4 HOH C 4 504 18 HOH HOH . 
E 4 HOH C 5 505 72 HOH HOH . 
E 4 HOH C 6 506 113 HOH HOH . 
E 4 HOH C 7 507 4 HOH HOH . 
E 4 HOH C 8 508 197 HOH HOH . 
E 4 HOH C 9 509 21 HOH HOH . 
E 4 HOH C 10 510 192 HOH HOH . 
E 4 HOH C 11 511 181 HOH HOH . 
E 4 HOH C 12 512 10 HOH HOH . 
E 4 HOH C 13 513 35 HOH HOH . 
E 4 HOH C 14 514 38 HOH HOH . 
E 4 HOH C 15 515 5 HOH HOH . 
E 4 HOH C 16 516 2 HOH HOH . 
E 4 HOH C 17 517 134 HOH HOH . 
E 4 HOH C 18 518 168 HOH HOH . 
E 4 HOH C 19 519 133 HOH HOH . 
E 4 HOH C 20 520 76 HOH HOH . 
E 4 HOH C 21 521 13 HOH HOH . 
E 4 HOH C 22 522 95 HOH HOH . 
E 4 HOH C 23 523 175 HOH HOH . 
E 4 HOH C 24 524 43 HOH HOH . 
E 4 HOH C 25 525 64 HOH HOH . 
E 4 HOH C 26 526 163 HOH HOH . 
E 4 HOH C 27 527 118 HOH HOH . 
E 4 HOH C 28 528 22 HOH HOH . 
E 4 HOH C 29 529 26 HOH HOH . 
E 4 HOH C 30 530 24 HOH HOH . 
E 4 HOH C 31 531 32 HOH HOH . 
E 4 HOH C 32 532 33 HOH HOH . 
E 4 HOH C 33 533 20 HOH HOH . 
E 4 HOH C 34 534 98 HOH HOH . 
E 4 HOH C 35 535 101 HOH HOH . 
E 4 HOH C 36 536 30 HOH HOH . 
E 4 HOH C 37 537 196 HOH HOH . 
E 4 HOH C 38 538 40 HOH HOH . 
E 4 HOH C 39 539 117 HOH HOH . 
E 4 HOH C 40 540 125 HOH HOH . 
E 4 HOH C 41 541 27 HOH HOH . 
E 4 HOH C 42 542 39 HOH HOH . 
E 4 HOH C 43 543 184 HOH HOH . 
E 4 HOH C 44 544 119 HOH HOH . 
E 4 HOH C 45 545 176 HOH HOH . 
E 4 HOH C 46 546 100 HOH HOH . 
E 4 HOH C 47 547 70 HOH HOH . 
E 4 HOH C 48 548 3 HOH HOH . 
E 4 HOH C 49 549 7 HOH HOH . 
E 4 HOH C 50 550 158 HOH HOH . 
E 4 HOH C 51 551 147 HOH HOH . 
E 4 HOH C 52 552 198 HOH HOH . 
E 4 HOH C 53 553 62 HOH HOH . 
E 4 HOH C 54 554 31 HOH HOH . 
E 4 HOH C 55 555 179 HOH HOH . 
E 4 HOH C 56 556 82 HOH HOH . 
E 4 HOH C 57 557 170 HOH HOH . 
E 4 HOH C 58 558 194 HOH HOH . 
E 4 HOH C 59 559 8 HOH HOH . 
E 4 HOH C 60 560 104 HOH HOH . 
E 4 HOH C 61 561 16 HOH HOH . 
E 4 HOH C 62 562 11 HOH HOH . 
E 4 HOH C 63 563 185 HOH HOH . 
E 4 HOH C 64 564 86 HOH HOH . 
E 4 HOH C 65 565 29 HOH HOH . 
E 4 HOH C 66 566 139 HOH HOH . 
E 4 HOH C 67 567 66 HOH HOH . 
F 4 HOH B 1 101 195 HOH HOH . 
F 4 HOH B 2 102 199 HOH HOH . 
F 4 HOH B 3 103 77 HOH HOH . 
F 4 HOH B 4 104 17 HOH HOH . 
F 4 HOH B 5 105 9 HOH HOH . 
F 4 HOH B 6 106 105 HOH HOH . 
F 4 HOH B 7 107 60 HOH HOH . 
F 4 HOH B 8 108 85 HOH HOH . 
F 4 HOH B 9 109 79 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 10.389 0.307 21.552 1 91.33 ? C1 GOL 401 C 1 
HETATM 2 O O1 GOL . . . C 3 9.373 0.077 22.524 1 92.12 ? O1 GOL 401 C 1 
HETATM 3 C C2 GOL . . . C 3 10.022 1.45 20.627 1 90.61 ? C2 GOL 401 C 1 
HETATM 4 O O2 GOL . . . C 3 10.623 1.249 19.347 1 71.46 ? O2 GOL 401 C 1 
HETATM 5 C C3 GOL . . . C 3 10.412 2.806 21.179 1 88.62 ? C3 GOL 401 C 1 
HETATM 6 O O3 GOL . . . C 3 9.488 3.819 20.787 1 76.84 ? O3 GOL 401 C 1 
#
_model_server_stats.io_time_ms              122 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#