data_6NVU # _model_server_result.job_id MzhNnT-9mC_xN12N8GZ4-A _model_server_result.datetime_utc '2024-12-13 00:04:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6nvu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":305}' # _entry.id 6NVU # _exptl.entry_id 6NVU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 157.167 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(2-HYDROXY-4-OXO-BUTYL)-N-(3-OXO-TRANSPROPENYL)AMINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6NVU _cell.length_a 98.64 _cell.length_b 98.64 _cell.length_c 100.4 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NVU _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 46 A SER 70 1_555 F C7 TEM . A TEM 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.378 ? metalc ? metalc1 A OG SER 46 A SER 70 1_555 J NA NA . A NA 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.149 ? metalc ? metalc2 A OG SER 110 A SER 130 1_555 J NA NA . A NA 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc3 F O8 TEM . A TEM 305 1_555 J NA NA . A NA 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.187 ? metalc ? metalc4 I O1 L4A . A L4A 308 1_555 J NA NA . A NA 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? # _chem_comp.formula 'C7 H11 N O3' _chem_comp.formula_weight 157.167 _chem_comp.id TEM _chem_comp.mon_nstd_flag . _chem_comp.name N-(2-HYDROXY-4-OXO-BUTYL)-N-(3-OXO-TRANSPROPENYL)AMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 TEM sing 349 n n O1 HO1 TEM sing 350 n n C2 C3 TEM sing 351 n n C2 C9 TEM sing 352 n n C2 H2 TEM sing 353 n n C3 N4 TEM sing 354 n n C3 H31 TEM sing 355 n n C3 H32 TEM sing 356 n n N4 C5 TEM sing 357 n n N4 HN4 TEM sing 358 n n C5 C6 TEM doub 359 e n C5 H5 TEM sing 360 n n C6 C7 TEM sing 361 n n C6 H6 TEM sing 362 n n C7 O8 TEM doub 363 n n C7 H7 TEM sing 364 n n C9 C10 TEM sing 365 n n C9 H91 TEM sing 366 n n C9 H92 TEM sing 367 n n C10 O11 TEM doub 368 n n C10 H10 TEM sing 369 n n # _atom_sites.entry_id 6NVU _atom_sites.fract_transf_matrix[1][1] 0.010138 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010138 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00996 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 301 1 SO4 SO4 . C 3 ACT A 1 302 1 ACT ACT . D 3 ACT A 1 303 2 ACT ACT . E 3 ACT A 1 304 3 ACT ACT . F 4 TEM A 1 305 1 TEM TEM . G 5 CL A 1 306 1 CL CL . H 5 CL A 1 307 2 CL CL . I 6 L4A A 1 308 1 L4A HCA . J 7 NA A 1 309 1 NA NA . K 8 J01 A 1 310 1 J01 CLA . L 8 J01 A 1 311 2 J01 CLA . M 9 HOH A 1 401 92 HOH HOH . M 9 HOH A 2 402 110 HOH HOH . M 9 HOH A 3 403 58 HOH HOH . M 9 HOH A 4 404 61 HOH HOH . M 9 HOH A 5 405 59 HOH HOH . M 9 HOH A 6 406 47 HOH HOH . M 9 HOH A 7 407 54 HOH HOH . M 9 HOH A 8 408 161 HOH HOH . M 9 HOH A 9 409 76 HOH HOH . M 9 HOH A 10 410 33 HOH HOH . M 9 HOH A 11 411 72 HOH HOH . M 9 HOH A 12 412 89 HOH HOH . M 9 HOH A 13 413 155 HOH HOH . M 9 HOH A 14 414 2 HOH HOH . M 9 HOH A 15 415 29 HOH HOH . M 9 HOH A 16 416 81 HOH HOH . M 9 HOH A 17 417 44 HOH HOH . M 9 HOH A 18 418 97 HOH HOH . M 9 HOH A 19 419 37 HOH HOH . M 9 HOH A 20 420 91 HOH HOH . M 9 HOH A 21 421 6 HOH HOH . M 9 HOH A 22 422 18 HOH HOH . M 9 HOH A 23 423 3 HOH HOH . M 9 HOH A 24 424 162 HOH HOH . M 9 HOH A 25 425 7 HOH HOH . M 9 HOH A 26 426 112 HOH HOH . M 9 HOH A 27 427 85 HOH HOH . M 9 HOH A 28 428 34 HOH HOH . M 9 HOH A 29 429 27 HOH HOH . M 9 HOH A 30 430 42 HOH HOH . M 9 HOH A 31 431 90 HOH HOH . M 9 HOH A 32 432 12 HOH HOH . M 9 HOH A 33 433 30 HOH HOH . M 9 HOH A 34 434 98 HOH HOH . M 9 HOH A 35 435 49 HOH HOH . M 9 HOH A 36 436 114 HOH HOH . M 9 HOH A 37 437 17 HOH HOH . M 9 HOH A 38 438 67 HOH HOH . M 9 HOH A 39 439 105 HOH HOH . M 9 HOH A 40 440 32 HOH HOH . M 9 HOH A 41 441 84 HOH HOH . M 9 HOH A 42 442 118 HOH HOH . M 9 HOH A 43 443 159 HOH HOH . M 9 HOH A 44 444 134 HOH HOH . M 9 HOH A 45 445 5 HOH HOH . M 9 HOH A 46 446 55 HOH HOH . M 9 HOH A 47 447 106 HOH HOH . M 9 HOH A 48 448 115 HOH HOH . M 9 HOH A 49 449 63 HOH HOH . M 9 HOH A 50 450 35 HOH HOH . M 9 HOH A 51 451 113 HOH HOH . M 9 HOH A 52 452 128 HOH HOH . M 9 HOH A 53 453 139 HOH HOH . M 9 HOH A 54 454 41 HOH HOH . M 9 HOH A 55 455 22 HOH HOH . M 9 HOH A 56 456 11 HOH HOH . M 9 HOH A 57 457 140 HOH HOH . M 9 HOH A 58 458 65 HOH HOH . M 9 HOH A 59 459 31 HOH HOH . M 9 HOH A 60 460 14 HOH HOH . M 9 HOH A 61 461 70 HOH HOH . M 9 HOH A 62 462 51 HOH HOH . M 9 HOH A 63 463 8 HOH HOH . M 9 HOH A 64 464 28 HOH HOH . M 9 HOH A 65 465 24 HOH HOH . M 9 HOH A 66 466 120 HOH HOH . M 9 HOH A 67 467 56 HOH HOH . M 9 HOH A 68 468 9 HOH HOH . M 9 HOH A 69 469 15 HOH HOH . M 9 HOH A 70 470 46 HOH HOH . M 9 HOH A 71 471 71 HOH HOH . M 9 HOH A 72 472 20 HOH HOH . M 9 HOH A 73 473 100 HOH HOH . M 9 HOH A 74 474 38 HOH HOH . M 9 HOH A 75 475 62 HOH HOH . M 9 HOH A 76 476 104 HOH HOH . M 9 HOH A 77 477 36 HOH HOH . M 9 HOH A 78 478 53 HOH HOH . M 9 HOH A 79 479 83 HOH HOH . M 9 HOH A 80 480 79 HOH HOH . M 9 HOH A 81 481 10 HOH HOH . M 9 HOH A 82 482 43 HOH HOH . M 9 HOH A 83 483 108 HOH HOH . M 9 HOH A 84 484 130 HOH HOH . M 9 HOH A 85 485 40 HOH HOH . M 9 HOH A 86 486 123 HOH HOH . M 9 HOH A 87 487 99 HOH HOH . M 9 HOH A 88 488 132 HOH HOH . M 9 HOH A 89 489 109 HOH HOH . M 9 HOH A 90 490 1 HOH HOH . M 9 HOH A 91 491 16 HOH HOH . M 9 HOH A 92 492 13 HOH HOH . M 9 HOH A 93 493 116 HOH HOH . M 9 HOH A 94 494 57 HOH HOH . M 9 HOH A 95 495 143 HOH HOH . M 9 HOH A 96 496 107 HOH HOH . M 9 HOH A 97 497 4 HOH HOH . M 9 HOH A 98 498 138 HOH HOH . M 9 HOH A 99 499 21 HOH HOH . M 9 HOH A 100 500 52 HOH HOH . M 9 HOH A 101 501 124 HOH HOH . M 9 HOH A 102 502 73 HOH HOH . M 9 HOH A 103 503 151 HOH HOH . M 9 HOH A 104 504 77 HOH HOH . M 9 HOH A 105 505 75 HOH HOH . M 9 HOH A 106 506 154 HOH HOH . M 9 HOH A 107 507 68 HOH HOH . M 9 HOH A 108 508 148 HOH HOH . M 9 HOH A 109 509 122 HOH HOH . M 9 HOH A 110 510 87 HOH HOH . M 9 HOH A 111 511 131 HOH HOH . M 9 HOH A 112 512 125 HOH HOH . M 9 HOH A 113 513 156 HOH HOH . M 9 HOH A 114 514 64 HOH HOH . M 9 HOH A 115 515 93 HOH HOH . M 9 HOH A 116 516 69 HOH HOH . M 9 HOH A 117 517 78 HOH HOH . M 9 HOH A 118 518 74 HOH HOH . M 9 HOH A 119 519 137 HOH HOH . M 9 HOH A 120 520 39 HOH HOH . M 9 HOH A 121 521 88 HOH HOH . M 9 HOH A 122 522 145 HOH HOH . M 9 HOH A 123 523 153 HOH HOH . M 9 HOH A 124 524 26 HOH HOH . M 9 HOH A 125 525 119 HOH HOH . M 9 HOH A 126 526 48 HOH HOH . M 9 HOH A 127 527 146 HOH HOH . M 9 HOH A 128 528 19 HOH HOH . M 9 HOH A 129 529 160 HOH HOH . M 9 HOH A 130 530 45 HOH HOH . M 9 HOH A 131 531 102 HOH HOH . M 9 HOH A 132 532 66 HOH HOH . M 9 HOH A 133 533 152 HOH HOH . M 9 HOH A 134 534 157 HOH HOH . M 9 HOH A 135 535 111 HOH HOH . M 9 HOH A 136 536 117 HOH HOH . M 9 HOH A 137 537 60 HOH HOH . M 9 HOH A 138 538 103 HOH HOH . M 9 HOH A 139 539 144 HOH HOH . M 9 HOH A 140 540 86 HOH HOH . M 9 HOH A 141 541 101 HOH HOH . M 9 HOH A 142 542 23 HOH HOH . M 9 HOH A 143 543 96 HOH HOH . M 9 HOH A 144 544 94 HOH HOH . M 9 HOH A 145 545 95 HOH HOH . M 9 HOH A 146 546 147 HOH HOH . M 9 HOH A 147 547 80 HOH HOH . M 9 HOH A 148 548 133 HOH HOH . M 9 HOH A 149 549 136 HOH HOH . M 9 HOH A 150 550 158 HOH HOH . M 9 HOH A 151 551 121 HOH HOH . M 9 HOH A 152 552 127 HOH HOH . M 9 HOH A 153 553 150 HOH HOH . M 9 HOH A 154 554 50 HOH HOH . M 9 HOH A 155 555 149 HOH HOH . M 9 HOH A 156 556 135 HOH HOH . M 9 HOH A 157 557 142 HOH HOH . M 9 HOH A 158 558 25 HOH HOH . M 9 HOH A 159 559 82 HOH HOH . M 9 HOH A 160 560 126 HOH HOH . M 9 HOH A 161 561 141 HOH HOH . M 9 HOH A 162 562 129 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 TEM . . . F 4 8.831 35.694 21.272 1 48.82 ? O1 TEM 305 A 1 HETATM 2 C C2 TEM . . . F 4 8.227 34.699 21.5 1 48.7 ? C2 TEM 305 A 1 HETATM 3 C C3 TEM . . . F 4 7.913 33.675 20.38 1 53.89 ? C3 TEM 305 A 1 HETATM 4 N N4 TEM . . . F 4 8.631 33.903 19.113 1 53.97 ? N4 TEM 305 A 1 HETATM 5 C C5 TEM . . . F 4 8.874 32.875 18.092 1 41.4 ? C5 TEM 305 A 1 HETATM 6 C C6 TEM . . . F 4 8.131 31.786 17.964 1 42.87 ? C6 TEM 305 A 1 HETATM 7 C C7 TEM . . . F 4 8.429 30.715 16.894 1 45.44 ? C7 TEM 305 A 1 HETATM 8 O O8 TEM . . . F 4 9.433 29.865 17.407 1 40.19 ? O8 TEM 305 A 1 HETATM 9 C C9 TEM . . . F 4 7.778 34.466 22.947 1 46.4 ? C9 TEM 305 A 1 HETATM 10 C C10 TEM . . . F 4 8.967 34.332 23.914 1 49.73 ? C10 TEM 305 A 1 HETATM 11 O O11 TEM . . . F 4 8.711 35.052 25.094 1 47.45 ? O11 TEM 305 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 11 #