data_6NWK # _model_server_result.job_id LWkRHgBxOiYwtBHuRQFJ2w _model_server_result.datetime_utc '2024-10-13 14:22:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6nwk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6NWK # _exptl.entry_id 6NWK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 392.461 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DEXAMETHASONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6NWK _cell.length_a 71.787 _cell.length_b 96.407 _cell.length_c 107.903 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NWK _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H29 F O5' _chem_comp.formula_weight 392.461 _chem_comp.id DEX _chem_comp.mon_nstd_flag . _chem_comp.name DEXAMETHASONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 9A-FLUORO-16BETA-METHYLPREDNISOLONE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 DEX doub 89 n n C1 C10 DEX sing 90 n n C1 H1 DEX sing 91 n n C2 C3 DEX sing 92 n n C2 H2 DEX sing 93 n n C3 C4 DEX sing 94 n n C3 O1 DEX doub 95 n n C4 C5 DEX doub 96 n n C4 H4 DEX sing 97 n n C5 C6 DEX sing 98 n n C5 C10 DEX sing 99 n n C6 C7 DEX sing 100 n n C6 H61 DEX sing 101 n n C6 H62 DEX sing 102 n n C7 C8 DEX sing 103 n n C7 H71 DEX sing 104 n n C7 H72 DEX sing 105 n n C8 C9 DEX sing 106 n n C8 C14 DEX sing 107 n n C8 H8 DEX sing 108 n n C9 C10 DEX sing 109 n n C9 C11 DEX sing 110 n n C9 F1 DEX sing 111 n n C10 C19 DEX sing 112 n n C11 C12 DEX sing 113 n n C11 O2 DEX sing 114 n n C11 H11 DEX sing 115 n n C12 C13 DEX sing 116 n n C12 H211 DEX sing 117 n n C12 H221 DEX sing 118 n n C13 C14 DEX sing 119 n n C13 C17 DEX sing 120 n n C13 C18 DEX sing 121 n n C14 C15 DEX sing 122 n n C14 H14 DEX sing 123 n n C15 C16 DEX sing 124 n n C15 H511 DEX sing 125 n n C15 H521 DEX sing 126 n n C16 C17 DEX sing 127 n n C16 C22 DEX sing 128 n n C16 H16 DEX sing 129 n n C17 C20 DEX sing 130 n n C17 O3 DEX sing 131 n n C18 H811 DEX sing 132 n n C18 H821 DEX sing 133 n n C18 H831 DEX sing 134 n n C19 H911 DEX sing 135 n n C19 H921 DEX sing 136 n n C19 H931 DEX sing 137 n n C20 C21 DEX sing 138 n n C20 O4 DEX doub 139 n n C21 O5 DEX sing 140 n n C21 H112 DEX sing 141 n n C21 H122 DEX sing 142 n n C22 H212 DEX sing 143 n n C22 H222 DEX sing 144 n n C22 H232 DEX sing 145 n n O2 HO2 DEX sing 146 n n O3 H3 DEX sing 147 n n O5 H5 DEX sing 148 n n # _atom_sites.entry_id 6NWK _atom_sites.fract_transf_matrix[1][1] 0.01393 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010373 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009268 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 DEX A 1 301 301 DEX DEX . D 4 FMT A 1 302 1 FMT FMT . E 5 ACE A 1 303 2 ACE ACE . F 6 DMS A 1 304 3 DMS DMS . G 6 DMS A 1 305 4 DMS DMS . H 7 GOL A 1 306 5 GOL GOL . I 8 HOH A 1 401 33 HOH HOH . I 8 HOH A 2 402 53 HOH HOH . I 8 HOH A 3 403 81 HOH HOH . I 8 HOH A 4 404 13 HOH HOH . I 8 HOH A 5 405 56 HOH HOH . I 8 HOH A 6 406 39 HOH HOH . I 8 HOH A 7 407 21 HOH HOH . I 8 HOH A 8 408 5 HOH HOH . I 8 HOH A 9 409 23 HOH HOH . I 8 HOH A 10 410 29 HOH HOH . I 8 HOH A 11 411 18 HOH HOH . I 8 HOH A 12 412 46 HOH HOH . I 8 HOH A 13 413 44 HOH HOH . I 8 HOH A 14 414 69 HOH HOH . I 8 HOH A 15 415 45 HOH HOH . I 8 HOH A 16 416 14 HOH HOH . I 8 HOH A 17 417 42 HOH HOH . I 8 HOH A 18 418 84 HOH HOH . I 8 HOH A 19 419 8 HOH HOH . I 8 HOH A 20 420 15 HOH HOH . I 8 HOH A 21 421 41 HOH HOH . I 8 HOH A 22 422 47 HOH HOH . I 8 HOH A 23 423 26 HOH HOH . I 8 HOH A 24 424 36 HOH HOH . I 8 HOH A 25 425 24 HOH HOH . I 8 HOH A 26 426 22 HOH HOH . I 8 HOH A 27 427 4 HOH HOH . I 8 HOH A 28 428 67 HOH HOH . I 8 HOH A 29 429 20 HOH HOH . I 8 HOH A 30 430 2 HOH HOH . I 8 HOH A 31 431 25 HOH HOH . I 8 HOH A 32 432 55 HOH HOH . I 8 HOH A 33 433 77 HOH HOH . I 8 HOH A 34 434 3 HOH HOH . I 8 HOH A 35 435 16 HOH HOH . I 8 HOH A 36 436 11 HOH HOH . I 8 HOH A 37 437 70 HOH HOH . I 8 HOH A 38 438 19 HOH HOH . I 8 HOH A 39 439 51 HOH HOH . I 8 HOH A 40 440 9 HOH HOH . I 8 HOH A 41 441 43 HOH HOH . I 8 HOH A 42 442 32 HOH HOH . I 8 HOH A 43 443 28 HOH HOH . I 8 HOH A 44 444 12 HOH HOH . I 8 HOH A 45 445 85 HOH HOH . I 8 HOH A 46 446 54 HOH HOH . I 8 HOH A 47 447 52 HOH HOH . I 8 HOH A 48 448 76 HOH HOH . I 8 HOH A 49 449 30 HOH HOH . I 8 HOH A 50 450 50 HOH HOH . I 8 HOH A 51 451 73 HOH HOH . I 8 HOH A 52 452 72 HOH HOH . I 8 HOH A 53 453 63 HOH HOH . I 8 HOH A 54 454 48 HOH HOH . I 8 HOH A 55 455 1 HOH HOH . I 8 HOH A 56 456 17 HOH HOH . I 8 HOH A 57 457 37 HOH HOH . I 8 HOH A 58 458 60 HOH HOH . I 8 HOH A 59 459 40 HOH HOH . I 8 HOH A 60 460 64 HOH HOH . I 8 HOH A 61 461 38 HOH HOH . I 8 HOH A 62 462 74 HOH HOH . I 8 HOH A 63 463 31 HOH HOH . I 8 HOH A 64 464 80 HOH HOH . I 8 HOH A 65 465 49 HOH HOH . I 8 HOH A 66 466 65 HOH HOH . I 8 HOH A 67 467 27 HOH HOH . J 8 HOH B 1 201 66 HOH HOH . J 8 HOH B 2 202 75 HOH HOH . J 8 HOH B 3 203 82 HOH HOH . J 8 HOH B 4 204 68 HOH HOH . J 8 HOH B 5 205 59 HOH HOH . J 8 HOH B 6 206 83 HOH HOH . J 8 HOH B 7 207 57 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DEX . . . C 3 70.621 126.067 11.678 1 27.83 ? C1 DEX 301 A 1 HETATM 2 C C2 DEX . . . C 3 71.586 125.664 12.482 1 29.02 ? C2 DEX 301 A 1 HETATM 3 C C3 DEX . . . C 3 71.735 124.28 12.879 1 48.04 ? C3 DEX 301 A 1 HETATM 4 C C4 DEX . . . C 3 70.975 123.323 12.101 1 25.39 ? C4 DEX 301 A 1 HETATM 5 C C5 DEX . . . C 3 70.056 123.709 11.21 1 24.29 ? C5 DEX 301 A 1 HETATM 6 C C6 DEX . . . C 3 69.194 122.689 10.528 1 29.66 ? C6 DEX 301 A 1 HETATM 7 C C7 DEX . . . C 3 67.7 123.055 10.732 1 25.81 ? C7 DEX 301 A 1 HETATM 8 C C8 DEX . . . C 3 67.433 124.417 10.264 1 27.21 ? C8 DEX 301 A 1 HETATM 9 C C9 DEX . . . C 3 68.303 125.427 11.076 1 25.03 ? C9 DEX 301 A 1 HETATM 10 C C10 DEX . . . C 3 69.825 125.126 10.846 1 25.41 ? C10 DEX 301 A 1 HETATM 11 C C11 DEX . . . C 3 67.954 126.956 10.857 1 26.5 ? C11 DEX 301 A 1 HETATM 12 C C12 DEX . . . C 3 66.433 127.205 10.992 1 29.31 ? C12 DEX 301 A 1 HETATM 13 C C13 DEX . . . C 3 65.611 126.281 10.093 1 26.62 ? C13 DEX 301 A 1 HETATM 14 C C14 DEX . . . C 3 65.958 124.815 10.506 1 29.17 ? C14 DEX 301 A 1 HETATM 15 C C15 DEX . . . C 3 64.887 123.99 9.81 1 28.45 ? C15 DEX 301 A 1 HETATM 16 C C16 DEX . . . C 3 63.607 124.898 9.851 1 31.54 ? C16 DEX 301 A 1 HETATM 17 C C17 DEX . . . C 3 64.04 126.281 10.359 1 26.49 ? C17 DEX 301 A 1 HETATM 18 C C18 DEX . . . C 3 65.849 126.586 8.62 1 31.52 ? C18 DEX 301 A 1 HETATM 19 C C19 DEX . . . C 3 70.236 125.285 9.426 1 26.21 ? C19 DEX 301 A 1 HETATM 20 C C20 DEX . . . C 3 63.355 127.457 9.636 1 31.87 ? C20 DEX 301 A 1 HETATM 21 C C21 DEX . . . C 3 63.242 128.79 10.398 1 35.79 ? C21 DEX 301 A 1 HETATM 22 C C22 DEX . . . C 3 62.602 124.265 10.769 1 38.76 ? C22 DEX 301 A 1 HETATM 23 F F1 DEX . . . C 3 68.081 125.22 12.405 1 26.38 ? F1 DEX 301 A 1 HETATM 24 O O1 DEX . . . C 3 72.433 123.945 13.816 1 42.68 ? O1 DEX 301 A 1 HETATM 25 O O2 DEX . . . C 3 68.449 127.45 9.637 1 28.36 ? O2 DEX 301 A 1 HETATM 26 O O3 DEX . . . C 3 63.829 126.395 11.719 1 31.15 ? O3 DEX 301 A 1 HETATM 27 O O4 DEX . . . C 3 62.927 127.361 8.508 1 31.83 ? O4 DEX 301 A 1 HETATM 28 O O5 DEX . . . C 3 63.193 129.777 9.412 1 33.04 ? O5 DEX 301 A 1 HETATM 29 H H1 DEX . . . C 3 70.532 126.972 11.482 1 33.4 ? H1 DEX 301 A 1 HETATM 30 H H2 DEX . . . C 3 72.209 126.264 12.823 1 34.82 ? H2 DEX 301 A 1 HETATM 31 H H4 DEX . . . C 3 71.106 122.424 12.3 1 30.47 ? H4 DEX 301 A 1 HETATM 32 H H61 DEX . . . C 3 69.363 121.797 10.869 1 35.59 ? H61 DEX 301 A 1 HETATM 33 H H62 DEX . . . C 3 69.426 122.626 9.588 1 35.59 ? H62 DEX 301 A 1 HETATM 34 H H71 DEX . . . C 3 67.429 122.947 11.657 1 30.98 ? H71 DEX 301 A 1 HETATM 35 H H72 DEX . . . C 3 67.144 122.418 10.255 1 30.98 ? H72 DEX 301 A 1 HETATM 36 H H8 DEX . . . C 3 67.671 124.473 9.326 1 32.65 ? H8 DEX 301 A 1 HETATM 37 H H11 DEX . . . C 3 68.412 127.468 11.542 1 31.8 ? H11 DEX 301 A 1 HETATM 38 H H211 DEX . . . C 3 66.216 128.129 10.791 1 35.17 ? H211 DEX 301 A 1 HETATM 39 H H221 DEX . . . C 3 66.2 127.101 11.928 1 35.17 ? H221 DEX 301 A 1 HETATM 40 H H14 DEX . . . C 3 65.802 124.723 11.459 1 35 ? H14 DEX 301 A 1 HETATM 41 H H511 DEX . . . C 3 64.74 123.129 10.231 1 34.14 ? H511 DEX 301 A 1 HETATM 42 H H521 DEX . . . C 3 65.141 123.754 8.904 1 34.14 ? H521 DEX 301 A 1 HETATM 43 H H16 DEX . . . C 3 63.232 124.952 8.958 1 37.85 ? H16 DEX 301 A 1 HETATM 44 H H811 DEX . . . C 3 66.729 126.315 8.316 1 37.83 ? H811 DEX 301 A 1 HETATM 45 H H821 DEX . . . C 3 65.264 126.092 8.024 1 37.83 ? H821 DEX 301 A 1 HETATM 46 H H831 DEX . . . C 3 65.768 127.53 8.41 1 37.83 ? H831 DEX 301 A 1 HETATM 47 H H911 DEX . . . C 3 71.054 124.808 9.217 1 31.46 ? H911 DEX 301 A 1 HETATM 48 H H921 DEX . . . C 3 69.558 124.96 8.814 1 31.46 ? H921 DEX 301 A 1 HETATM 49 H H931 DEX . . . C 3 70.381 126.216 9.194 1 31.46 ? H931 DEX 301 A 1 HETATM 50 H H112 DEX . . . C 3 62.453 128.781 10.962 1 42.94 ? H112 DEX 301 A 1 HETATM 51 H H122 DEX . . . C 3 64.004 128.904 10.987 1 42.94 ? H122 DEX 301 A 1 HETATM 52 H H212 DEX . . . C 3 62.341 123.394 10.432 1 46.51 ? H212 DEX 301 A 1 HETATM 53 H H222 DEX . . . C 3 62.945 124.135 11.667 1 46.51 ? H222 DEX 301 A 1 HETATM 54 H H232 DEX . . . C 3 61.791 124.794 10.838 1 46.51 ? H232 DEX 301 A 1 HETATM 55 H HO2 DEX . . . C 3 69.112 127.958 9.791 1 34.03 ? HO2 DEX 301 A 1 HETATM 56 H H3 DEX . . . C 3 64.149 127.144 11.963 1 37.39 ? H3 DEX 301 A 1 HETATM 57 H H5 DEX . . . C 3 62.372 129.967 9.301 1 39.65 ? H5 DEX 301 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 57 #