data_6NWK # _model_server_result.job_id lySavkIZQySwOLd04_iCWg _model_server_result.datetime_utc '2024-11-26 18:25:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6nwk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":304}' # _entry.id 6NWK # _exptl.entry_id 6NWK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6NWK _cell.length_a 71.787 _cell.length_b 96.407 _cell.length_c 107.903 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NWK _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 149 n n S C1 DMS sing 150 n n S C2 DMS sing 151 n n C1 H11 DMS sing 152 n n C1 H12 DMS sing 153 n n C1 H13 DMS sing 154 n n C2 H21 DMS sing 155 n n C2 H22 DMS sing 156 n n C2 H23 DMS sing 157 n n # _atom_sites.entry_id 6NWK _atom_sites.fract_transf_matrix[1][1] 0.01393 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010373 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009268 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 DEX A 1 301 301 DEX DEX . D 4 FMT A 1 302 1 FMT FMT . E 5 ACE A 1 303 2 ACE ACE . F 6 DMS A 1 304 3 DMS DMS . G 6 DMS A 1 305 4 DMS DMS . H 7 GOL A 1 306 5 GOL GOL . I 8 HOH A 1 401 33 HOH HOH . I 8 HOH A 2 402 53 HOH HOH . I 8 HOH A 3 403 81 HOH HOH . I 8 HOH A 4 404 13 HOH HOH . I 8 HOH A 5 405 56 HOH HOH . I 8 HOH A 6 406 39 HOH HOH . I 8 HOH A 7 407 21 HOH HOH . I 8 HOH A 8 408 5 HOH HOH . I 8 HOH A 9 409 23 HOH HOH . I 8 HOH A 10 410 29 HOH HOH . I 8 HOH A 11 411 18 HOH HOH . I 8 HOH A 12 412 46 HOH HOH . I 8 HOH A 13 413 44 HOH HOH . I 8 HOH A 14 414 69 HOH HOH . I 8 HOH A 15 415 45 HOH HOH . I 8 HOH A 16 416 14 HOH HOH . I 8 HOH A 17 417 42 HOH HOH . I 8 HOH A 18 418 84 HOH HOH . I 8 HOH A 19 419 8 HOH HOH . I 8 HOH A 20 420 15 HOH HOH . I 8 HOH A 21 421 41 HOH HOH . I 8 HOH A 22 422 47 HOH HOH . I 8 HOH A 23 423 26 HOH HOH . I 8 HOH A 24 424 36 HOH HOH . I 8 HOH A 25 425 24 HOH HOH . I 8 HOH A 26 426 22 HOH HOH . I 8 HOH A 27 427 4 HOH HOH . I 8 HOH A 28 428 67 HOH HOH . I 8 HOH A 29 429 20 HOH HOH . I 8 HOH A 30 430 2 HOH HOH . I 8 HOH A 31 431 25 HOH HOH . I 8 HOH A 32 432 55 HOH HOH . I 8 HOH A 33 433 77 HOH HOH . I 8 HOH A 34 434 3 HOH HOH . I 8 HOH A 35 435 16 HOH HOH . I 8 HOH A 36 436 11 HOH HOH . I 8 HOH A 37 437 70 HOH HOH . I 8 HOH A 38 438 19 HOH HOH . I 8 HOH A 39 439 51 HOH HOH . I 8 HOH A 40 440 9 HOH HOH . I 8 HOH A 41 441 43 HOH HOH . I 8 HOH A 42 442 32 HOH HOH . I 8 HOH A 43 443 28 HOH HOH . I 8 HOH A 44 444 12 HOH HOH . I 8 HOH A 45 445 85 HOH HOH . I 8 HOH A 46 446 54 HOH HOH . I 8 HOH A 47 447 52 HOH HOH . I 8 HOH A 48 448 76 HOH HOH . I 8 HOH A 49 449 30 HOH HOH . I 8 HOH A 50 450 50 HOH HOH . I 8 HOH A 51 451 73 HOH HOH . I 8 HOH A 52 452 72 HOH HOH . I 8 HOH A 53 453 63 HOH HOH . I 8 HOH A 54 454 48 HOH HOH . I 8 HOH A 55 455 1 HOH HOH . I 8 HOH A 56 456 17 HOH HOH . I 8 HOH A 57 457 37 HOH HOH . I 8 HOH A 58 458 60 HOH HOH . I 8 HOH A 59 459 40 HOH HOH . I 8 HOH A 60 460 64 HOH HOH . I 8 HOH A 61 461 38 HOH HOH . I 8 HOH A 62 462 74 HOH HOH . I 8 HOH A 63 463 31 HOH HOH . I 8 HOH A 64 464 80 HOH HOH . I 8 HOH A 65 465 49 HOH HOH . I 8 HOH A 66 466 65 HOH HOH . I 8 HOH A 67 467 27 HOH HOH . J 8 HOH B 1 201 66 HOH HOH . J 8 HOH B 2 202 75 HOH HOH . J 8 HOH B 3 203 82 HOH HOH . J 8 HOH B 4 204 68 HOH HOH . J 8 HOH B 5 205 59 HOH HOH . J 8 HOH B 6 206 83 HOH HOH . J 8 HOH B 7 207 57 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . F 6 76.287 109.478 24.92 1 107.9 ? S DMS 304 A 1 HETATM 2 O O DMS . . . F 6 77.153 110.702 24.797 1 74.62 ? O DMS 304 A 1 HETATM 3 C C1 DMS . . . F 6 75.2 109.411 26.394 1 34.47 ? C1 DMS 304 A 1 HETATM 4 C C2 DMS . . . F 6 75.035 109.492 23.617 1 80.78 ? C2 DMS 304 A 1 HETATM 5 H H11 DMS . . . F 6 75.794 109.354 27.269 1 41.36 ? H11 DMS 304 A 1 HETATM 6 H H12 DMS . . . F 6 74.577 108.556 26.335 1 41.36 ? H12 DMS 304 A 1 HETATM 7 H H13 DMS . . . F 6 74.6 110.283 26.431 1 41.36 ? H13 DMS 304 A 1 HETATM 8 H H21 DMS . . . F 6 74.371 108.678 23.756 1 96.94 ? H21 DMS 304 A 1 HETATM 9 H H22 DMS . . . F 6 75.506 109.406 22.673 1 96.94 ? H22 DMS 304 A 1 HETATM 10 H H23 DMS . . . F 6 74.492 110.4 23.659 1 96.94 ? H23 DMS 304 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #