data_6NWL # _model_server_result.job_id G8unUFYN0BAyDJ_YQAWhyw _model_server_result.datetime_utc '2024-10-13 16:26:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6nwl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6NWL # _exptl.entry_id 6NWL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 362.46 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6NWL _cell.length_a 71.756 _cell.length_b 96.435 _cell.length_c 108.195 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NWL _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H30 O5' _chem_comp.formula_weight 362.46 _chem_comp.id HCY _chem_comp.mon_nstd_flag . _chem_comp.name (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms CORTISOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C3 HCY doub 175 n n C3 C4 HCY sing 176 n n C3 C2 HCY sing 177 n n C4 C5 HCY doub 178 n n C5 C6 HCY sing 179 n n C5 C10 HCY sing 180 n n C6 C7 HCY sing 181 n n C7 C8 HCY sing 182 n n C2 C1 HCY sing 183 n n C1 C10 HCY sing 184 n n C10 C19 HCY sing 185 n n C10 C9 HCY sing 186 n n C9 C8 HCY sing 187 n n C9 C11 HCY sing 188 n n C8 C14 HCY sing 189 n n C11 O2 HCY sing 190 n n C11 C12 HCY sing 191 n n C12 C13 HCY sing 192 n n C13 C18 HCY sing 193 n n C13 C14 HCY sing 194 n n C13 C17 HCY sing 195 n n C14 C15 HCY sing 196 n n C15 C16 HCY sing 197 n n C16 C17 HCY sing 198 n n C17 O3 HCY sing 199 n n C17 C20 HCY sing 200 n n C20 O4 HCY doub 201 n n C20 C21 HCY sing 202 n n C21 O5 HCY sing 203 n n C4 H4 HCY sing 204 n n C2 H2C1 HCY sing 205 n n C2 H2C2 HCY sing 206 n n C6 H6C1 HCY sing 207 n n C6 H6C2 HCY sing 208 n n C7 H7C1 HCY sing 209 n n C7 H7C2 HCY sing 210 n n C8 H8 HCY sing 211 n n C1 H1C1 HCY sing 212 n n C1 H1C2 HCY sing 213 n n C19 H191 HCY sing 214 n n C19 H192 HCY sing 215 n n C19 H193 HCY sing 216 n n C9 H9 HCY sing 217 n n C11 H11 HCY sing 218 n n C14 H14 HCY sing 219 n n O2 H2 HCY sing 220 n n C12 H121 HCY sing 221 n n C12 H122 HCY sing 222 n n C18 H181 HCY sing 223 n n C18 H182 HCY sing 224 n n C18 H183 HCY sing 225 n n C15 H151 HCY sing 226 n n C15 H152 HCY sing 227 n n C16 H161 HCY sing 228 n n C16 H162 HCY sing 229 n n O3 H3 HCY sing 230 n n C21 H211 HCY sing 231 n n C21 H212 HCY sing 232 n n O5 H5 HCY sing 233 n n # _atom_sites.entry_id 6NWL _atom_sites.fract_transf_matrix[1][1] 0.013936 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01037 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009243 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HCY A 1 301 1 HCY HCY . D 4 GOL A 1 302 1 GOL GOL . E 4 GOL A 1 303 2 GOL GOL . F 5 TLA A 1 304 3 TLA TLA . G 6 EPE A 1 305 4 EPE EPE . H 7 SCN A 1 306 5 SCN SCN . I 4 GOL A 1 307 6 GOL GOL . J 7 SCN A 1 308 7 SCN SCN . K 8 HOH A 1 401 82 HOH HOH . K 8 HOH A 2 402 64 HOH HOH . K 8 HOH A 3 403 73 HOH HOH . K 8 HOH A 4 404 67 HOH HOH . K 8 HOH A 5 405 50 HOH HOH . K 8 HOH A 6 406 35 HOH HOH . K 8 HOH A 7 407 75 HOH HOH . K 8 HOH A 8 408 95 HOH HOH . K 8 HOH A 9 409 76 HOH HOH . K 8 HOH A 10 410 92 HOH HOH . K 8 HOH A 11 411 94 HOH HOH . K 8 HOH A 12 412 33 HOH HOH . K 8 HOH A 13 413 41 HOH HOH . K 8 HOH A 14 414 88 HOH HOH . K 8 HOH A 15 415 45 HOH HOH . K 8 HOH A 16 416 20 HOH HOH . K 8 HOH A 17 417 43 HOH HOH . K 8 HOH A 18 418 3 HOH HOH . K 8 HOH A 19 419 32 HOH HOH . K 8 HOH A 20 420 89 HOH HOH . K 8 HOH A 21 421 55 HOH HOH . K 8 HOH A 22 422 69 HOH HOH . K 8 HOH A 23 423 97 HOH HOH . K 8 HOH A 24 424 22 HOH HOH . K 8 HOH A 25 425 5 HOH HOH . K 8 HOH A 26 426 60 HOH HOH . K 8 HOH A 27 427 98 HOH HOH . K 8 HOH A 28 428 46 HOH HOH . K 8 HOH A 29 429 52 HOH HOH . K 8 HOH A 30 430 86 HOH HOH . K 8 HOH A 31 431 38 HOH HOH . K 8 HOH A 32 432 12 HOH HOH . K 8 HOH A 33 433 99 HOH HOH . K 8 HOH A 34 434 83 HOH HOH . K 8 HOH A 35 435 18 HOH HOH . K 8 HOH A 36 436 11 HOH HOH . K 8 HOH A 37 437 72 HOH HOH . K 8 HOH A 38 438 27 HOH HOH . K 8 HOH A 39 439 40 HOH HOH . K 8 HOH A 40 440 1 HOH HOH . K 8 HOH A 41 441 93 HOH HOH . K 8 HOH A 42 442 90 HOH HOH . K 8 HOH A 43 443 2 HOH HOH . K 8 HOH A 44 444 31 HOH HOH . K 8 HOH A 45 445 7 HOH HOH . K 8 HOH A 46 446 19 HOH HOH . K 8 HOH A 47 447 54 HOH HOH . K 8 HOH A 48 448 15 HOH HOH . K 8 HOH A 49 449 23 HOH HOH . K 8 HOH A 50 450 30 HOH HOH . K 8 HOH A 51 451 9 HOH HOH . K 8 HOH A 52 452 14 HOH HOH . K 8 HOH A 53 453 49 HOH HOH . K 8 HOH A 54 454 13 HOH HOH . K 8 HOH A 55 455 6 HOH HOH . K 8 HOH A 56 456 36 HOH HOH . K 8 HOH A 57 457 26 HOH HOH . K 8 HOH A 58 458 62 HOH HOH . K 8 HOH A 59 459 65 HOH HOH . K 8 HOH A 60 460 70 HOH HOH . K 8 HOH A 61 461 61 HOH HOH . K 8 HOH A 62 462 21 HOH HOH . K 8 HOH A 63 463 51 HOH HOH . K 8 HOH A 64 464 77 HOH HOH . K 8 HOH A 65 465 47 HOH HOH . K 8 HOH A 66 466 42 HOH HOH . K 8 HOH A 67 467 78 HOH HOH . K 8 HOH A 68 468 34 HOH HOH . K 8 HOH A 69 469 63 HOH HOH . K 8 HOH A 70 470 79 HOH HOH . K 8 HOH A 71 471 59 HOH HOH . K 8 HOH A 72 472 85 HOH HOH . K 8 HOH A 73 473 28 HOH HOH . K 8 HOH A 74 474 16 HOH HOH . K 8 HOH A 75 475 68 HOH HOH . K 8 HOH A 76 476 87 HOH HOH . K 8 HOH A 77 477 48 HOH HOH . K 8 HOH A 78 478 10 HOH HOH . K 8 HOH A 79 479 56 HOH HOH . K 8 HOH A 80 480 53 HOH HOH . K 8 HOH A 81 481 66 HOH HOH . K 8 HOH A 82 482 96 HOH HOH . K 8 HOH A 83 483 81 HOH HOH . K 8 HOH A 84 484 71 HOH HOH . K 8 HOH A 85 485 74 HOH HOH . K 8 HOH A 86 486 91 HOH HOH . K 8 HOH A 87 487 29 HOH HOH . K 8 HOH A 88 488 57 HOH HOH . K 8 HOH A 89 489 39 HOH HOH . L 8 HOH B 1 201 44 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HCY . . . C 3 0.933 -29.556 12.041 1 26.07 ? C1 HCY 301 A 1 HETATM 2 C C2 HCY . . . C 3 -0.395 -29.01 12.513 1 29.94 ? C2 HCY 301 A 1 HETATM 3 C C3 HCY . . . C 3 -0.221 -27.617 13.041 1 27.65 ? C3 HCY 301 A 1 HETATM 4 C C4 HCY . . . C 3 0.721 -26.756 12.338 1 25.25 ? C4 HCY 301 A 1 HETATM 5 C C5 HCY . . . C 3 1.601 -27.223 11.444 1 23.46 ? C5 HCY 301 A 1 HETATM 6 C C6 HCY . . . C 3 2.505 -26.278 10.724 1 26.16 ? C6 HCY 301 A 1 HETATM 7 C C7 HCY . . . C 3 3.984 -26.689 10.823 1 24.5 ? C7 HCY 301 A 1 HETATM 8 C C8 HCY . . . C 3 4.155 -28.101 10.343 1 25.27 ? C8 HCY 301 A 1 HETATM 9 C C9 HCY . . . C 3 3.26 -29.038 11.172 1 23.62 ? C9 HCY 301 A 1 HETATM 10 C C10 HCY . . . C 3 1.74 -28.656 11.088 1 22.82 ? C10 HCY 301 A 1 HETATM 11 C C12 HCY . . . C 3 5.013 -30.925 10.931 1 24.77 ? C12 HCY 301 A 1 HETATM 12 C C11 HCY . . . C 3 3.515 -30.555 10.892 1 22.85 ? C11 HCY 301 A 1 HETATM 13 C C13 HCY . . . C 3 5.839 -30.027 10.027 1 26 ? C13 HCY 301 A 1 HETATM 14 C C14 HCY . . . C 3 5.619 -28.559 10.478 1 25.94 ? C14 HCY 301 A 1 HETATM 15 C C15 HCY . . . C 3 6.664 -27.809 9.642 1 26.06 ? C15 HCY 301 A 1 HETATM 16 C C16 HCY . . . C 3 7.909 -28.76 9.673 1 29.8 ? C16 HCY 301 A 1 HETATM 17 C C17 HCY . . . C 3 7.401 -30.161 10.17 1 26.36 ? C17 HCY 301 A 1 HETATM 18 C C18 HCY . . . C 3 5.474 -30.254 8.561 1 24.36 ? C18 HCY 301 A 1 HETATM 19 C C19 HCY . . . C 3 1.138 -28.785 9.666 1 24.83 ? C19 HCY 301 A 1 HETATM 20 C C20 HCY . . . C 3 7.952 -31.352 9.372 1 25.77 ? C20 HCY 301 A 1 HETATM 21 C C21 HCY . . . C 3 7.984 -32.7 10.092 1 25.17 ? C21 HCY 301 A 1 HETATM 22 O O1 HCY . . . C 3 -0.848 -27.224 14.016 1 32.34 ? O1 HCY 301 A 1 HETATM 23 O O2 HCY . . . C 3 2.874 -30.965 9.696 1 25.43 ? O2 HCY 301 A 1 HETATM 24 O O3 HCY . . . C 3 7.689 -30.349 11.522 1 30.4 ? O3 HCY 301 A 1 HETATM 25 O O4 HCY . . . C 3 8.363 -31.254 8.232 1 28.32 ? O4 HCY 301 A 1 HETATM 26 O O5 HCY . . . C 3 8.036 -33.659 9.096 1 28.61 ? O5 HCY 301 A 1 HETATM 27 H H4 HCY . . . C 3 0.681 -25.85 12.543 1 30.3 ? H4 HCY 301 A 1 HETATM 28 H H2C1 HCY . . . C 3 -1.048 -29.033 11.796 1 35.93 ? H2C1 HCY 301 A 1 HETATM 29 H H2C2 HCY . . . C 3 -0.778 -29.572 13.205 1 35.93 ? H2C2 HCY 301 A 1 HETATM 30 H H6C1 HCY . . . C 3 2.236 -26.195 9.795 1 31.4 ? H6C1 HCY 301 A 1 HETATM 31 H H6C2 HCY . . . C 3 2.395 -25.373 11.056 1 31.4 ? H6C2 HCY 301 A 1 HETATM 32 H H7C1 HCY . . . C 3 4.527 -26.076 10.304 1 29.4 ? H7C1 HCY 301 A 1 HETATM 33 H H7C2 HCY . . . C 3 4.31 -26.581 11.73 1 29.4 ? H7C2 HCY 301 A 1 HETATM 34 H H8 HCY . . . C 3 3.889 -28.123 9.41 1 30.32 ? H8 HCY 301 A 1 HETATM 35 H H1C1 HCY . . . C 3 1.47 -29.789 12.814 1 31.28 ? H1C1 HCY 301 A 1 HETATM 36 H H1C2 HCY . . . C 3 0.788 -30.42 11.625 1 31.28 ? H1C2 HCY 301 A 1 HETATM 37 H H191 HCY . . . C 3 0.576 -29.567 9.55 1 29.8 ? H191 HCY 301 A 1 HETATM 38 H H192 HCY . . . C 3 0.613 -28.012 9.406 1 29.8 ? H192 HCY 301 A 1 HETATM 39 H H193 HCY . . . C 3 1.842 -28.844 9.001 1 29.8 ? H193 HCY 301 A 1 HETATM 40 H H9 HCY . . . C 3 3.534 -28.915 12.095 1 28.34 ? H9 HCY 301 A 1 HETATM 41 H H11 HCY . . . C 3 3.056 -31.05 11.589 1 27.42 ? H11 HCY 301 A 1 HETATM 42 H H14 HCY . . . C 3 5.868 -28.451 11.409 1 31.13 ? H14 HCY 301 A 1 HETATM 43 H H2 HCY . . . C 3 3.307 -31.606 9.345 1 30.52 ? H2 HCY 301 A 1 HETATM 44 H H121 HCY . . . C 3 5.321 -30.878 11.85 1 29.72 ? H121 HCY 301 A 1 HETATM 45 H H122 HCY . . . C 3 5.144 -31.86 10.709 1 29.72 ? H122 HCY 301 A 1 HETATM 46 H H181 HCY . . . C 3 5.375 -31.189 8.322 1 29.24 ? H181 HCY 301 A 1 HETATM 47 H H182 HCY . . . C 3 4.611 -29.895 8.305 1 29.24 ? H182 HCY 301 A 1 HETATM 48 H H183 HCY . . . C 3 6.14 -29.885 7.961 1 29.24 ? H183 HCY 301 A 1 HETATM 49 H H151 HCY . . . C 3 6.352 -27.66 8.736 1 31.27 ? H151 HCY 301 A 1 HETATM 50 H H152 HCY . . . C 3 6.866 -26.92 9.973 1 31.27 ? H152 HCY 301 A 1 HETATM 51 H H161 HCY . . . C 3 8.325 -28.807 8.799 1 35.76 ? H161 HCY 301 A 1 HETATM 52 H H162 HCY . . . C 3 8.602 -28.408 10.254 1 35.76 ? H162 HCY 301 A 1 HETATM 53 H H3 HCY . . . C 3 7.532 -29.617 11.924 1 36.47 ? H3 HCY 301 A 1 HETATM 54 H H211 HCY . . . C 3 7.199 -32.769 10.656 1 30.2 ? H211 HCY 301 A 1 HETATM 55 H H212 HCY . . . C 3 8.744 -32.76 10.692 1 30.2 ? H212 HCY 301 A 1 HETATM 56 H H5 HCY . . . C 3 8.791 -34.045 9.156 1 34.33 ? H5 HCY 301 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 56 #