data_6NZJ # _model_server_result.job_id wYZOFkk86qYVE94nZtsOkw _model_server_result.datetime_utc '2024-10-19 23:42:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6nzj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6NZJ # _exptl.entry_id 6NZJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.64 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6NZJ _cell.length_a 96.169 _cell.length_b 96.169 _cell.length_c 320.244 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NZJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 95 A CYS 95 1_555 C FE3 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc2 A SG CYS 130 A CYS 130 1_555 C FE1 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc3 C FE2 SF4 . A SF4 301 1_555 B SG CYS 95 B CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc4 C FE4 SF4 . A SF4 301 1_555 B SG CYS 130 B CYS 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 290 n n FE1 S3 SF4 sing 291 n n FE1 S4 SF4 sing 292 n n FE2 S1 SF4 sing 293 n n FE2 S3 SF4 sing 294 n n FE2 S4 SF4 sing 295 n n FE3 S1 SF4 sing 296 n n FE3 S2 SF4 sing 297 n n FE3 S4 SF4 sing 298 n n FE4 S1 SF4 sing 299 n n FE4 S2 SF4 sing 300 n n FE4 S3 SF4 sing 301 n n # _atom_sites.entry_id 6NZJ _atom_sites.fract_transf_matrix[1][1] 0.010398 _atom_sites.fract_transf_matrix[1][2] 0.006004 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012007 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003123 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SF4 A 1 301 301 SF4 SF4 . D 3 SO4 A 1 302 302 SO4 SO4 . E 3 SO4 B 1 301 303 SO4 SO4 . F 3 SO4 B 1 302 304 SO4 SO4 . G 4 HOH A 1 401 73 HOH HOH . G 4 HOH A 2 402 31 HOH HOH . G 4 HOH A 3 403 108 HOH HOH . G 4 HOH A 4 404 167 HOH HOH . G 4 HOH A 5 405 58 HOH HOH . G 4 HOH A 6 406 14 HOH HOH . G 4 HOH A 7 407 33 HOH HOH . G 4 HOH A 8 408 109 HOH HOH . G 4 HOH A 9 409 38 HOH HOH . G 4 HOH A 10 410 90 HOH HOH . G 4 HOH A 11 411 151 HOH HOH . G 4 HOH A 12 412 37 HOH HOH . G 4 HOH A 13 413 129 HOH HOH . G 4 HOH A 14 414 16 HOH HOH . G 4 HOH A 15 415 39 HOH HOH . G 4 HOH A 16 416 78 HOH HOH . G 4 HOH A 17 417 34 HOH HOH . G 4 HOH A 18 418 154 HOH HOH . G 4 HOH A 19 419 32 HOH HOH . G 4 HOH A 20 420 69 HOH HOH . G 4 HOH A 21 421 57 HOH HOH . G 4 HOH A 22 422 178 HOH HOH . G 4 HOH A 23 423 80 HOH HOH . G 4 HOH A 24 424 3 HOH HOH . G 4 HOH A 25 425 11 HOH HOH . G 4 HOH A 26 426 29 HOH HOH . G 4 HOH A 27 427 2 HOH HOH . G 4 HOH A 28 428 18 HOH HOH . G 4 HOH A 29 429 140 HOH HOH . G 4 HOH A 30 430 189 HOH HOH . G 4 HOH A 31 431 65 HOH HOH . G 4 HOH A 32 432 51 HOH HOH . G 4 HOH A 33 433 141 HOH HOH . G 4 HOH A 34 434 10 HOH HOH . G 4 HOH A 35 435 149 HOH HOH . G 4 HOH A 36 436 7 HOH HOH . G 4 HOH A 37 437 36 HOH HOH . G 4 HOH A 38 438 5 HOH HOH . G 4 HOH A 39 439 25 HOH HOH . G 4 HOH A 40 440 26 HOH HOH . G 4 HOH A 41 441 122 HOH HOH . G 4 HOH A 42 442 23 HOH HOH . G 4 HOH A 43 443 35 HOH HOH . G 4 HOH A 44 444 106 HOH HOH . G 4 HOH A 45 445 70 HOH HOH . G 4 HOH A 46 446 4 HOH HOH . G 4 HOH A 47 447 30 HOH HOH . G 4 HOH A 48 448 102 HOH HOH . G 4 HOH A 49 449 62 HOH HOH . G 4 HOH A 50 450 138 HOH HOH . G 4 HOH A 51 451 96 HOH HOH . G 4 HOH A 52 452 145 HOH HOH . G 4 HOH A 53 453 187 HOH HOH . G 4 HOH A 54 454 87 HOH HOH . G 4 HOH A 55 455 128 HOH HOH . G 4 HOH A 56 456 17 HOH HOH . G 4 HOH A 57 457 137 HOH HOH . G 4 HOH A 58 458 24 HOH HOH . G 4 HOH A 59 459 54 HOH HOH . G 4 HOH A 60 460 93 HOH HOH . G 4 HOH A 61 461 147 HOH HOH . G 4 HOH A 62 462 174 HOH HOH . G 4 HOH A 63 463 94 HOH HOH . G 4 HOH A 64 464 144 HOH HOH . G 4 HOH A 65 465 130 HOH HOH . G 4 HOH A 66 466 81 HOH HOH . G 4 HOH A 67 467 159 HOH HOH . G 4 HOH A 68 468 107 HOH HOH . G 4 HOH A 69 469 86 HOH HOH . G 4 HOH A 70 470 76 HOH HOH . G 4 HOH A 71 471 182 HOH HOH . G 4 HOH A 72 472 146 HOH HOH . G 4 HOH A 73 473 196 HOH HOH . G 4 HOH A 74 474 180 HOH HOH . G 4 HOH A 75 475 142 HOH HOH . G 4 HOH A 76 476 181 HOH HOH . G 4 HOH A 77 477 118 HOH HOH . G 4 HOH A 78 478 123 HOH HOH . G 4 HOH A 79 479 168 HOH HOH . G 4 HOH A 80 480 125 HOH HOH . G 4 HOH A 81 481 67 HOH HOH . G 4 HOH A 82 482 112 HOH HOH . G 4 HOH A 83 483 99 HOH HOH . G 4 HOH A 84 484 193 HOH HOH . G 4 HOH A 85 485 120 HOH HOH . G 4 HOH A 86 486 89 HOH HOH . G 4 HOH A 87 487 116 HOH HOH . G 4 HOH A 88 488 124 HOH HOH . H 4 HOH B 1 401 173 HOH HOH . H 4 HOH B 2 402 83 HOH HOH . H 4 HOH B 3 403 53 HOH HOH . H 4 HOH B 4 404 143 HOH HOH . H 4 HOH B 5 405 8 HOH HOH . H 4 HOH B 6 406 50 HOH HOH . H 4 HOH B 7 407 66 HOH HOH . H 4 HOH B 8 408 113 HOH HOH . H 4 HOH B 9 409 103 HOH HOH . H 4 HOH B 10 410 28 HOH HOH . H 4 HOH B 11 411 74 HOH HOH . H 4 HOH B 12 412 27 HOH HOH . H 4 HOH B 13 413 185 HOH HOH . H 4 HOH B 14 414 105 HOH HOH . H 4 HOH B 15 415 177 HOH HOH . H 4 HOH B 16 416 133 HOH HOH . H 4 HOH B 17 417 68 HOH HOH . H 4 HOH B 18 418 60 HOH HOH . H 4 HOH B 19 419 9 HOH HOH . H 4 HOH B 20 420 49 HOH HOH . H 4 HOH B 21 421 1 HOH HOH . H 4 HOH B 22 422 19 HOH HOH . H 4 HOH B 23 423 72 HOH HOH . H 4 HOH B 24 424 48 HOH HOH . H 4 HOH B 25 425 6 HOH HOH . H 4 HOH B 26 426 44 HOH HOH . H 4 HOH B 27 427 43 HOH HOH . H 4 HOH B 28 428 63 HOH HOH . H 4 HOH B 29 429 45 HOH HOH . H 4 HOH B 30 430 52 HOH HOH . H 4 HOH B 31 431 75 HOH HOH . H 4 HOH B 32 432 47 HOH HOH . H 4 HOH B 33 433 61 HOH HOH . H 4 HOH B 34 434 22 HOH HOH . H 4 HOH B 35 435 160 HOH HOH . H 4 HOH B 36 436 153 HOH HOH . H 4 HOH B 37 437 156 HOH HOH . H 4 HOH B 38 438 56 HOH HOH . H 4 HOH B 39 439 162 HOH HOH . H 4 HOH B 40 440 199 HOH HOH . H 4 HOH B 41 441 13 HOH HOH . H 4 HOH B 42 442 82 HOH HOH . H 4 HOH B 43 443 161 HOH HOH . H 4 HOH B 44 444 15 HOH HOH . H 4 HOH B 45 445 188 HOH HOH . H 4 HOH B 46 446 92 HOH HOH . H 4 HOH B 47 447 20 HOH HOH . H 4 HOH B 48 448 136 HOH HOH . H 4 HOH B 49 449 71 HOH HOH . H 4 HOH B 50 450 21 HOH HOH . H 4 HOH B 51 451 98 HOH HOH . H 4 HOH B 52 452 100 HOH HOH . H 4 HOH B 53 453 55 HOH HOH . H 4 HOH B 54 454 85 HOH HOH . H 4 HOH B 55 455 79 HOH HOH . H 4 HOH B 56 456 126 HOH HOH . H 4 HOH B 57 457 41 HOH HOH . H 4 HOH B 58 458 84 HOH HOH . H 4 HOH B 59 459 59 HOH HOH . H 4 HOH B 60 460 91 HOH HOH . H 4 HOH B 61 461 176 HOH HOH . H 4 HOH B 62 462 97 HOH HOH . H 4 HOH B 63 463 150 HOH HOH . H 4 HOH B 64 464 135 HOH HOH . H 4 HOH B 65 465 12 HOH HOH . H 4 HOH B 66 466 165 HOH HOH . H 4 HOH B 67 467 101 HOH HOH . H 4 HOH B 68 468 40 HOH HOH . H 4 HOH B 69 469 169 HOH HOH . H 4 HOH B 70 470 170 HOH HOH . H 4 HOH B 71 471 77 HOH HOH . H 4 HOH B 72 472 110 HOH HOH . H 4 HOH B 73 473 132 HOH HOH . H 4 HOH B 74 474 155 HOH HOH . H 4 HOH B 75 475 172 HOH HOH . H 4 HOH B 76 476 64 HOH HOH . H 4 HOH B 77 477 194 HOH HOH . H 4 HOH B 78 478 111 HOH HOH . H 4 HOH B 79 479 88 HOH HOH . H 4 HOH B 80 480 197 HOH HOH . H 4 HOH B 81 481 119 HOH HOH . H 4 HOH B 82 482 115 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . C 2 -36.521 35.613 -19.688 1 31.29 ? FE1 SF4 301 A 1 HETATM 2 FE FE2 SF4 . . . C 2 -36.924 36.973 -21.996 1 32.74 ? FE2 SF4 301 A 1 HETATM 3 FE FE3 SF4 . . . C 2 -34.572 35.668 -21.626 1 31.39 ? FE3 SF4 301 A 1 HETATM 4 FE FE4 SF4 . . . C 2 -35.118 37.884 -20.164 1 30.96 ? FE4 SF4 301 A 1 HETATM 5 S S1 SF4 . . . C 2 -34.805 37.766 -22.391 1 31.62 ? S1 SF4 301 A 1 HETATM 6 S S2 SF4 . . . C 2 -34.283 35.931 -19.371 1 32.06 ? S2 SF4 301 A 1 HETATM 7 S S3 SF4 . . . C 2 -37.393 37.696 -19.879 1 30.91 ? S3 SF4 301 A 1 HETATM 8 S S4 SF4 . . . C 2 -36.674 34.756 -21.794 1 31.96 ? S4 SF4 301 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #