data_6NZW # _model_server_result.job_id eWf7cTHlDI44gIXz5dIo5g _model_server_result.datetime_utc '2024-10-15 11:24:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6nzw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":902}' # _entry.id 6NZW # _exptl.entry_id 6NZW _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 760.076 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _entity.pdbx_number_of_molecules 18 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6NZW _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6NZW _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N ? 2 Y N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 54 A CYS 54 1_555 A SG CYS 310 A CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 A SG CYS 57 A CYS 57 1_555 A SG CYS 65 A CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 113 A CYS 113 1_555 A SG CYS 295 A CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 B SG CYS 54 B CYS 54 1_555 B SG CYS 310 B CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf5 B SG CYS 57 B CYS 57 1_555 B SG CYS 65 B CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 B SG CYS 113 B CYS 113 1_555 B SG CYS 295 B CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf7 C SG CYS 54 C CYS 54 1_555 C SG CYS 310 C CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf8 C SG CYS 57 C CYS 57 1_555 C SG CYS 65 C CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf9 C SG CYS 113 C CYS 113 1_555 C SG CYS 295 C CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf10 D SG CYS 54 D CYS 54 1_555 D SG CYS 310 D CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf11 D SG CYS 57 D CYS 57 1_555 D SG CYS 65 D CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf12 D SG CYS 113 D CYS 113 1_555 D SG CYS 295 D CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf13 E SG CYS 54 E CYS 54 1_555 E SG CYS 310 E CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf14 E SG CYS 57 E CYS 57 1_555 E SG CYS 65 E CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf15 E SG CYS 113 E CYS 113 1_555 E SG CYS 295 E CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf16 F SG CYS 54 F CYS 54 1_555 F SG CYS 310 F CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf17 F SG CYS 57 F CYS 57 1_555 F SG CYS 65 F CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf18 F SG CYS 113 F CYS 113 1_555 F SG CYS 295 F CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C42 H82 N O8 P' _chem_comp.formula_weight 760.076 _chem_comp.id POV _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms POPC # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C12 POV sing 316 n n N C13 POV sing 317 n n N C14 POV sing 318 n n N C15 POV sing 319 n n P O11 POV sing 320 n n P O12 POV sing 321 n n P O13 POV sing 322 n n P O14 POV doub 323 n n C1 C2 POV sing 324 n n C1 O11 POV sing 325 n n C1 H1 POV sing 326 n n C1 H1A POV sing 327 n n C2 C3 POV sing 328 n n C2 O21 POV sing 329 n n C2 H2 POV sing 330 n n C3 O31 POV sing 331 n n C3 H3 POV sing 332 n n C3 H3A POV sing 333 n n C210 C211 POV sing 334 n n C210 C29 POV doub 335 z n C210 H210 POV sing 336 n n C310 C311 POV sing 337 n n C310 C39 POV sing 338 n n C310 H310 POV sing 339 n n C310 H31A POV sing 340 n n C11 C12 POV sing 341 n n C11 O12 POV sing 342 n n C11 H11 POV sing 343 n n C11 H11A POV sing 344 n n C211 C212 POV sing 345 n n C211 H211 POV sing 346 n n C211 H21A POV sing 347 n n C311 C312 POV sing 348 n n C311 H311 POV sing 349 n n C311 H31B POV sing 350 n n C12 H12 POV sing 351 n n C12 H12A POV sing 352 n n C212 C213 POV sing 353 n n C212 H212 POV sing 354 n n C212 H21B POV sing 355 n n C312 C313 POV sing 356 n n C312 H312 POV sing 357 n n C312 H31C POV sing 358 n n C13 H13 POV sing 359 n n C13 H13A POV sing 360 n n C13 H13B POV sing 361 n n C213 C214 POV sing 362 n n C213 H213 POV sing 363 n n C213 H21C POV sing 364 n n C313 C314 POV sing 365 n n C313 H313 POV sing 366 n n C313 H31D POV sing 367 n n C14 H14 POV sing 368 n n C14 H14A POV sing 369 n n C14 H14B POV sing 370 n n C214 C215 POV sing 371 n n C214 H214 POV sing 372 n n C214 H21D POV sing 373 n n C314 C315 POV sing 374 n n C314 H314 POV sing 375 n n C314 H31E POV sing 376 n n C15 H15 POV sing 377 n n C15 H15A POV sing 378 n n C15 H15B POV sing 379 n n C215 C216 POV sing 380 n n C215 H215 POV sing 381 n n C215 H21E POV sing 382 n n C315 C316 POV sing 383 n n C315 H315 POV sing 384 n n C315 H31F POV sing 385 n n C216 C217 POV sing 386 n n C216 H216 POV sing 387 n n C216 H21F POV sing 388 n n C316 H316 POV sing 389 n n C316 H31G POV sing 390 n n C316 H31H POV sing 391 n n C217 C218 POV sing 392 n n C217 H217 POV sing 393 n n C217 H21G POV sing 394 n n C218 H218 POV sing 395 n n C218 H21H POV sing 396 n n C218 H21J POV sing 397 n n C21 O21 POV sing 398 n n C21 C22 POV sing 399 n n C21 O22 POV doub 400 n n C22 C23 POV sing 401 n n C22 H22 POV sing 402 n n C22 H22A POV sing 403 n n C23 C24 POV sing 404 n n C23 H23 POV sing 405 n n C23 H23A POV sing 406 n n C24 C25 POV sing 407 n n C24 H24 POV sing 408 n n C24 H24A POV sing 409 n n C25 C26 POV sing 410 n n C25 H25 POV sing 411 n n C25 H25A POV sing 412 n n C26 C27 POV sing 413 n n C26 H26 POV sing 414 n n C26 H26A POV sing 415 n n C27 C28 POV sing 416 n n C27 H27 POV sing 417 n n C27 H27A POV sing 418 n n C28 C29 POV sing 419 n n C28 H28 POV sing 420 n n C28 H28A POV sing 421 n n C29 H29 POV sing 422 n n C31 O31 POV sing 423 n n C31 C32 POV sing 424 n n C31 O32 POV doub 425 n n C32 C33 POV sing 426 n n C32 H32 POV sing 427 n n C32 H32A POV sing 428 n n C33 C34 POV sing 429 n n C33 H33 POV sing 430 n n C33 H33A POV sing 431 n n C34 C35 POV sing 432 n n C34 H34 POV sing 433 n n C34 H34A POV sing 434 n n C35 C36 POV sing 435 n n C35 H35 POV sing 436 n n C35 H35A POV sing 437 n n C36 C37 POV sing 438 n n C36 H36 POV sing 439 n n C36 H36A POV sing 440 n n C37 C38 POV sing 441 n n C37 H37 POV sing 442 n n C37 H37A POV sing 443 n n C38 C39 POV sing 444 n n C38 H38 POV sing 445 n n C38 H38A POV sing 446 n n C39 H39 POV sing 447 n n C39 H39A POV sing 448 n n # _atom_sites.entry_id 6NZW _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 POV A 1 901 901 POV POV . H 2 POV A 1 902 902 POV POV . I 2 POV A 1 903 903 POV POV . J 3 L9Y A 1 904 901 L9Y DCL . K 2 POV B 1 901 901 POV POV . L 2 POV B 1 902 902 POV POV . M 2 POV B 1 903 903 POV POV . N 2 POV C 1 901 901 POV POV . O 2 POV C 1 902 902 POV POV . P 2 POV C 1 903 903 POV POV . Q 2 POV D 1 901 901 POV POV . R 2 POV D 1 902 902 POV POV . S 2 POV D 1 903 903 POV POV . T 2 POV E 1 901 901 POV POV . U 2 POV E 1 902 902 POV POV . V 2 POV E 1 903 903 POV POV . W 2 POV F 1 901 901 POV POV . X 2 POV F 1 902 902 POV POV . Y 2 POV F 1 903 903 POV POV . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C310 POV . . . R 2 224.96 211.4 162.884 1 69.16 ? C310 POV 902 D 1 HETATM 2 C C31 POV . . . R 2 229.071 213.726 153.89 1 69.16 ? C31 POV 902 D 1 HETATM 3 O O31 POV . . . R 2 230.411 213.591 153.768 1 69.16 ? O31 POV 902 D 1 HETATM 4 C C32 POV . . . R 2 228.526 213.552 155.283 1 69.16 ? C32 POV 902 D 1 HETATM 5 O O32 POV . . . R 2 228.396 213.971 152.901 1 69.16 ? O32 POV 902 D 1 HETATM 6 C C33 POV . . . R 2 229.072 214.685 156.164 1 69.16 ? C33 POV 902 D 1 HETATM 7 C C34 POV . . . R 2 228.847 214.408 157.648 1 69.16 ? C34 POV 902 D 1 HETATM 8 C C35 POV . . . R 2 227.365 214.421 158 1 69.16 ? C35 POV 902 D 1 HETATM 9 C C36 POV . . . R 2 227.187 214.258 159.507 1 69.16 ? C36 POV 902 D 1 HETATM 10 C C37 POV . . . R 2 225.909 213.496 159.819 1 69.16 ? C37 POV 902 D 1 HETATM 11 C C38 POV . . . R 2 225.836 213.104 161.287 1 69.16 ? C38 POV 902 D 1 HETATM 12 C C39 POV . . . R 2 225.049 211.811 161.428 1 69.16 ? C39 POV 902 D 1 HETATM 13 H H32 POV . . . R 2 228.773 212.689 155.637 1 69.16 ? H32 POV 902 D 1 HETATM 14 H H32A POV . . . R 2 227.561 213.558 155.274 1 69.16 ? H32A POV 902 D 1 HETATM 15 H H33 POV . . . R 2 228.669 215.523 155.913 1 69.16 ? H33 POV 902 D 1 HETATM 16 H H33A POV . . . R 2 230.015 214.811 155.991 1 69.16 ? H33A POV 902 D 1 HETATM 17 H H34 POV . . . R 2 229.312 215.069 158.176 1 69.16 ? H34 POV 902 D 1 HETATM 18 H H34A POV . . . R 2 229.239 213.564 157.897 1 69.16 ? H34A POV 902 D 1 HETATM 19 H H35 POV . . . R 2 226.895 213.729 157.524 1 69.16 ? H35 POV 902 D 1 HETATM 20 H H35A POV . . . R 2 226.958 215.24 157.707 1 69.16 ? H35A POV 902 D 1 HETATM 21 H H36 POV . . . R 2 227.164 215.123 159.931 1 69.16 ? H36 POV 902 D 1 HETATM 22 H H36A POV . . . R 2 227.951 213.813 159.889 1 69.16 ? H36A POV 902 D 1 HETATM 23 H H37 POV . . . R 2 225.836 212.711 159.266 1 69.16 ? H37 POV 902 D 1 HETATM 24 H H37A POV . . . R 2 225.147 214.032 159.586 1 69.16 ? H37A POV 902 D 1 HETATM 25 H H38 POV . . . R 2 225.419 213.806 161.799 1 69.16 ? H38 POV 902 D 1 HETATM 26 H H38A POV . . . R 2 226.716 213.005 161.667 1 69.16 ? H38A POV 902 D 1 HETATM 27 H H39 POV . . . R 2 225.461 211.109 160.911 1 69.16 ? H39 POV 902 D 1 HETATM 28 H H39A POV . . . R 2 224.17 211.909 161.055 1 69.16 ? H39A POV 902 D 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 28 #