data_6O0K # _model_server_result.job_id tJZPgq-dB_pgMv7SYEqQ7A _model_server_result.datetime_utc '2024-11-22 20:11:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6o0k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6O0K # _exptl.entry_id 6O0K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 414.488 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NONAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6O0K _cell.length_a 33.725 _cell.length_b 48.506 _cell.length_c 87.316 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6O0K _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H38 O10' _chem_comp.formula_weight 414.488 _chem_comp.id 2PE _chem_comp.mon_nstd_flag . _chem_comp.name 'NONAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 2PE sing 1 n n O1 HO1 2PE sing 2 n n C2 C3 2PE sing 3 n n C2 H21 2PE sing 4 n n C2 H22 2PE sing 5 n n C3 O4 2PE sing 6 n n C3 H31 2PE sing 7 n n C3 H32 2PE sing 8 n n O4 C5 2PE sing 9 n n C5 C6 2PE sing 10 n n C5 H51 2PE sing 11 n n C5 H52 2PE sing 12 n n C6 O7 2PE sing 13 n n C6 H61 2PE sing 14 n n C6 H62 2PE sing 15 n n O7 C8 2PE sing 16 n n C8 C9 2PE sing 17 n n C8 H81 2PE sing 18 n n C8 H82 2PE sing 19 n n C9 O10 2PE sing 20 n n C9 H91 2PE sing 21 n n C9 H92 2PE sing 22 n n O10 C11 2PE sing 23 n n C11 C12 2PE sing 24 n n C11 H111 2PE sing 25 n n C11 H112 2PE sing 26 n n C12 O13 2PE sing 27 n n C12 H121 2PE sing 28 n n C12 H122 2PE sing 29 n n O13 C14 2PE sing 30 n n C14 C15 2PE sing 31 n n C14 H141 2PE sing 32 n n C14 H142 2PE sing 33 n n C15 O16 2PE sing 34 n n C15 H151 2PE sing 35 n n C15 H152 2PE sing 36 n n O16 C17 2PE sing 37 n n C17 C18 2PE sing 38 n n C17 H171 2PE sing 39 n n C17 H172 2PE sing 40 n n C18 O19 2PE sing 41 n n C18 H181 2PE sing 42 n n C18 H182 2PE sing 43 n n O19 C20 2PE sing 44 n n C20 C21 2PE sing 45 n n C20 H201 2PE sing 46 n n C20 H202 2PE sing 47 n n C21 O22 2PE sing 48 n n C21 H211 2PE sing 49 n n C21 H212 2PE sing 50 n n O22 C23 2PE sing 51 n n C23 C24 2PE sing 52 n n C23 H231 2PE sing 53 n n C23 H232 2PE sing 54 n n C24 O25 2PE sing 55 n n C24 H241 2PE sing 56 n n C24 H242 2PE sing 57 n n O25 C26 2PE sing 58 n n C26 C27 2PE sing 59 n n C26 H261 2PE sing 60 n n C26 H262 2PE sing 61 n n C27 O28 2PE sing 62 n n C27 H271 2PE sing 63 n n C27 H272 2PE sing 64 n n O28 HO2 2PE sing 65 n n # _atom_sites.entry_id 6O0K _atom_sites.fract_transf_matrix[1][1] 0.029652 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020616 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011453 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LBM A 1 301 301 LBM 199 . C 3 2PE A 1 302 302 2PE 2PE . D 4 HOH A 1 401 402 HOH HOH . D 4 HOH A 2 402 403 HOH HOH . D 4 HOH A 3 403 404 HOH HOH . D 4 HOH A 4 404 406 HOH HOH . D 4 HOH A 5 405 410 HOH HOH . D 4 HOH A 6 406 408 HOH HOH . D 4 HOH A 7 407 405 HOH HOH . D 4 HOH A 8 408 420 HOH HOH . D 4 HOH A 9 409 407 HOH HOH . D 4 HOH A 10 410 409 HOH HOH . D 4 HOH A 11 411 413 HOH HOH . D 4 HOH A 12 412 414 HOH HOH . D 4 HOH A 13 413 440 HOH HOH . D 4 HOH A 14 414 417 HOH HOH . D 4 HOH A 15 415 412 HOH HOH . D 4 HOH A 16 416 415 HOH HOH . D 4 HOH A 17 417 439 HOH HOH . D 4 HOH A 18 418 416 HOH HOH . D 4 HOH A 19 419 419 HOH HOH . D 4 HOH A 20 420 421 HOH HOH . D 4 HOH A 21 421 431 HOH HOH . D 4 HOH A 22 422 426 HOH HOH . D 4 HOH A 23 423 411 HOH HOH . D 4 HOH A 24 424 433 HOH HOH . D 4 HOH A 25 425 418 HOH HOH . D 4 HOH A 26 426 437 HOH HOH . D 4 HOH A 27 427 422 HOH HOH . D 4 HOH A 28 428 423 HOH HOH . D 4 HOH A 29 429 429 HOH HOH . D 4 HOH A 30 430 430 HOH HOH . D 4 HOH A 31 431 438 HOH HOH . D 4 HOH A 32 432 432 HOH HOH . D 4 HOH A 33 433 424 HOH HOH . D 4 HOH A 34 434 427 HOH HOH . D 4 HOH A 35 435 453 HOH HOH . D 4 HOH A 36 436 425 HOH HOH . D 4 HOH A 37 437 448 HOH HOH . D 4 HOH A 38 438 441 HOH HOH . D 4 HOH A 39 439 450 HOH HOH . D 4 HOH A 40 440 436 HOH HOH . D 4 HOH A 41 441 442 HOH HOH . D 4 HOH A 42 442 451 HOH HOH . D 4 HOH A 43 443 449 HOH HOH . D 4 HOH A 44 444 460 HOH HOH . D 4 HOH A 45 445 456 HOH HOH . D 4 HOH A 46 446 444 HOH HOH . D 4 HOH A 47 447 471 HOH HOH . D 4 HOH A 48 448 452 HOH HOH . D 4 HOH A 49 449 445 HOH HOH . D 4 HOH A 50 450 458 HOH HOH . D 4 HOH A 51 451 454 HOH HOH . D 4 HOH A 52 452 457 HOH HOH . D 4 HOH A 53 453 459 HOH HOH . D 4 HOH A 54 454 434 HOH HOH . D 4 HOH A 55 455 465 HOH HOH . D 4 HOH A 56 456 446 HOH HOH . D 4 HOH A 57 457 428 HOH HOH . D 4 HOH A 58 458 468 HOH HOH . D 4 HOH A 59 459 463 HOH HOH . D 4 HOH A 60 460 470 HOH HOH . D 4 HOH A 61 461 474 HOH HOH . D 4 HOH A 62 462 461 HOH HOH . D 4 HOH A 63 463 469 HOH HOH . D 4 HOH A 64 464 480 HOH HOH . D 4 HOH A 65 465 473 HOH HOH . D 4 HOH A 66 466 475 HOH HOH . D 4 HOH A 67 467 464 HOH HOH . D 4 HOH A 68 468 466 HOH HOH . D 4 HOH A 69 469 477 HOH HOH . D 4 HOH A 70 470 462 HOH HOH . D 4 HOH A 71 471 476 HOH HOH . D 4 HOH A 72 472 481 HOH HOH . D 4 HOH A 73 473 484 HOH HOH . D 4 HOH A 74 474 482 HOH HOH . D 4 HOH A 75 475 472 HOH HOH . D 4 HOH A 76 476 467 HOH HOH . D 4 HOH A 77 477 478 HOH HOH . D 4 HOH A 78 478 483 HOH HOH . D 4 HOH A 79 479 479 HOH HOH . D 4 HOH A 80 480 485 HOH HOH . D 4 HOH A 81 481 486 HOH HOH . D 4 HOH A 82 482 488 HOH HOH . D 4 HOH A 83 483 487 HOH HOH . D 4 HOH A 84 484 489 HOH HOH . D 4 HOH A 85 485 492 HOH HOH . D 4 HOH A 86 486 490 HOH HOH . D 4 HOH A 87 487 495 HOH HOH . D 4 HOH A 88 488 496 HOH HOH . D 4 HOH A 89 489 494 HOH HOH . D 4 HOH A 90 490 497 HOH HOH . D 4 HOH A 91 491 493 HOH HOH . D 4 HOH A 92 492 498 HOH HOH . D 4 HOH A 93 493 501 HOH HOH . D 4 HOH A 94 494 499 HOH HOH . D 4 HOH A 95 495 502 HOH HOH . D 4 HOH A 96 496 504 HOH HOH . D 4 HOH A 97 497 503 HOH HOH . D 4 HOH A 98 498 505 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 2PE . . . C 3 14.277 0.989 1.024 1 57.07 ? O1 2PE 302 A 1 HETATM 2 C C2 2PE . . . C 3 14.157 1.153 -0.363 1 55.97 ? C2 2PE 302 A 1 HETATM 3 C C3 2PE . . . C 3 12.928 1.922 -0.737 1 54.85 ? C3 2PE 302 A 1 HETATM 4 O O4 2PE . . . C 3 12.67 1.764 -2.129 1 57.29 ? O4 2PE 302 A 1 HETATM 5 C C5 2PE . . . C 3 11.364 1.265 -2.414 1 55.74 ? C5 2PE 302 A 1 HETATM 6 C C6 2PE . . . C 3 11.3 0.864 -3.851 1 53.94 ? C6 2PE 302 A 1 HETATM 7 O O7 2PE . . . C 3 12.511 0.196 -4.223 1 52.62 ? O7 2PE 302 A 1 HETATM 8 C C8 2PE . . . C 3 12.311 -1.036 -4.894 1 50.03 ? C8 2PE 302 A 1 HETATM 9 C C9 2PE . . . C 3 12.412 -0.844 -6.402 1 53.79 ? C9 2PE 302 A 1 HETATM 10 O O10 2PE . . . C 3 11.363 -0.026 -6.936 1 51.88 ? O10 2PE 302 A 1 HETATM 11 C C11 2PE . . . C 3 11.45 0.179 -8.351 1 48.34 ? C11 2PE 302 A 1 HETATM 12 C C12 2PE . . . C 3 10.047 0.178 -8.934 1 46.57 ? C12 2PE 302 A 1 HETATM 13 O O13 2PE . . . C 3 9.229 1.196 -8.336 1 40.5 ? O13 2PE 302 A 1 HETATM 14 C C14 2PE . . . C 3 8.636 2.032 -9.336 1 44.06 ? C14 2PE 302 A 1 HETATM 15 C C15 2PE . . . C 3 8.385 3.384 -8.796 1 50 ? C15 2PE 302 A 1 HETATM 16 O O16 2PE . . . C 3 8.524 4.412 -9.749 1 53.38 ? O16 2PE 302 A 1 HETATM 17 C C17 2PE . . . C 3 9.531 5.365 -9.439 1 54.17 ? C17 2PE 302 A 1 HETATM 18 C C18 2PE . . . C 3 10.882 4.765 -9.738 1 57.47 ? C18 2PE 302 A 1 HETATM 19 O O19 2PE . . . C 3 11.953 5.717 -9.674 1 54.84 ? O19 2PE 302 A 1 HETATM 20 C C20 2PE . . . C 3 12.791 5.688 -10.808 1 47.1 ? C20 2PE 302 A 1 HETATM 21 C C21 2PE . . . C 3 12.8 4.33 -11.439 1 39.78 ? C21 2PE 302 A 1 HETATM 22 O O22 2PE . . . C 3 12.289 4.402 -12.766 1 38.9 ? O22 2PE 302 A 1 HETATM 23 C C23 2PE . . . C 3 13.166 3.937 -13.743 1 42.21 ? C23 2PE 302 A 1 HETATM 24 C C24 2PE . . . C 3 12.457 3.617 -14.988 1 41.92 ? C24 2PE 302 A 1 HETATM 25 O O25 2PE . . . C 3 11.581 4.687 -15.319 1 46.78 ? O25 2PE 302 A 1 HETATM 26 C C26 2PE . . . C 3 12.257 5.917 -15.531 1 50.91 ? C26 2PE 302 A 1 HETATM 27 C C27 2PE . . . C 3 11.925 6.444 -16.885 1 56.03 ? C27 2PE 302 A 1 HETATM 28 O O28 2PE . . . C 3 12.506 7.728 -17.083 1 60.93 ? O28 2PE 302 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #