data_6O0W
#
_model_server_result.job_id            XdHRU_7e0Nygq_hp5tK9yQ 
_model_server_result.datetime_utc      '2024-11-18 03:41:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6o0w 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    6O0W 
#
_exptl.entry_id    6O0W 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              427.201 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-2'-5'-DIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          107.42 
_cell.angle_gamma         90 
_cell.entry_id            6O0W 
_cell.length_a            69.085 
_cell.length_b            79.399 
_cell.length_c            34.266 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6O0W 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C10 H15 N5 O10 P2' 
_chem_comp.formula_weight    427.201 
_chem_comp.id                A2P 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-2'-5'-DIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P1 O1P A2P doub 1 n n 
P1 O2P A2P sing 2 n n 
P1 O3P A2P sing 3 n n 
P1 O2' A2P sing 4 n n 
O2P HOP2 A2P sing 5 n n 
O3P HOP3 A2P sing 6 n n 
P2 O4P A2P doub 7 n n 
P2 O5P A2P sing 8 n n 
P2 O6P A2P sing 9 n n 
P2 O5' A2P sing 10 n n 
O5P HOP5 A2P sing 11 n n 
O6P HOP6 A2P sing 12 n n 
O5' C5' A2P sing 13 n n 
C5' C4' A2P sing 14 n n 
C5' "H5'1" A2P sing 15 n n 
C5' "H5'2" A2P sing 16 n n 
C4' O4' A2P sing 17 n n 
C4' C3' A2P sing 18 n n 
C4' H4' A2P sing 19 n n 
O4' C1' A2P sing 20 n n 
C3' O3' A2P sing 21 n n 
C3' C2' A2P sing 22 n n 
C3' H3' A2P sing 23 n n 
O3' HO3' A2P sing 24 n n 
C2' O2' A2P sing 25 n n 
C2' C1' A2P sing 26 n n 
C2' H2' A2P sing 27 n n 
C1' N9 A2P sing 28 n n 
C1' H1' A2P sing 29 n n 
N9 C8 A2P sing 30 n y 
N9 C4 A2P sing 31 n y 
C8 N7 A2P doub 32 n y 
C8 H8 A2P sing 33 n n 
N7 C5 A2P sing 34 n y 
C5 C6 A2P sing 35 n y 
C5 C4 A2P doub 36 n y 
C6 N6 A2P sing 37 n n 
C6 N1 A2P doub 38 n y 
N6 HN61 A2P sing 39 n n 
N6 HN62 A2P sing 40 n n 
N1 C2 A2P sing 41 n y 
C2 N3 A2P doub 42 n y 
C2 H2 A2P sing 43 n n 
N3 C4 A2P sing 44 n y 
#
_atom_sites.entry_id                     6O0W 
_atom_sites.fract_transf_matrix[1][1]    0.014475 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004541 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012595 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.030586 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 A2P A 1 201 201 A2P A2P . 
C 3 BTB A 1 202 202 BTB BTB . 
D 4 HOH A 1 301 301 HOH HOH . 
D 4 HOH A 2 302 302 HOH HOH . 
D 4 HOH A 3 303 303 HOH HOH . 
D 4 HOH A 4 304 304 HOH HOH . 
D 4 HOH A 5 305 305 HOH HOH . 
D 4 HOH A 6 306 306 HOH HOH . 
D 4 HOH A 7 307 307 HOH HOH . 
D 4 HOH A 8 308 308 HOH HOH . 
D 4 HOH A 9 309 309 HOH HOH . 
D 4 HOH A 10 310 310 HOH HOH . 
D 4 HOH A 11 311 311 HOH HOH . 
D 4 HOH A 12 312 312 HOH HOH . 
D 4 HOH A 13 313 313 HOH HOH . 
D 4 HOH A 14 314 314 HOH HOH . 
D 4 HOH A 15 315 315 HOH HOH . 
D 4 HOH A 16 316 316 HOH HOH . 
D 4 HOH A 17 317 317 HOH HOH . 
D 4 HOH A 18 318 318 HOH HOH . 
D 4 HOH A 19 319 319 HOH HOH . 
D 4 HOH A 20 320 320 HOH HOH . 
D 4 HOH A 21 321 321 HOH HOH . 
D 4 HOH A 22 322 322 HOH HOH . 
D 4 HOH A 23 323 323 HOH HOH . 
D 4 HOH A 24 324 324 HOH HOH . 
D 4 HOH A 25 325 325 HOH HOH . 
D 4 HOH A 26 326 326 HOH HOH . 
D 4 HOH A 27 327 327 HOH HOH . 
D 4 HOH A 28 328 328 HOH HOH . 
D 4 HOH A 29 329 329 HOH HOH . 
D 4 HOH A 30 330 330 HOH HOH . 
D 4 HOH A 31 331 331 HOH HOH . 
D 4 HOH A 32 332 332 HOH HOH . 
D 4 HOH A 33 333 333 HOH HOH . 
D 4 HOH A 34 334 334 HOH HOH . 
D 4 HOH A 35 335 335 HOH HOH . 
D 4 HOH A 36 336 336 HOH HOH . 
D 4 HOH A 37 337 337 HOH HOH . 
D 4 HOH A 38 338 338 HOH HOH . 
D 4 HOH A 39 339 339 HOH HOH . 
D 4 HOH A 40 340 340 HOH HOH . 
D 4 HOH A 41 341 341 HOH HOH . 
D 4 HOH A 42 342 342 HOH HOH . 
D 4 HOH A 43 343 343 HOH HOH . 
D 4 HOH A 44 344 344 HOH HOH . 
D 4 HOH A 45 345 345 HOH HOH . 
D 4 HOH A 46 346 346 HOH HOH . 
D 4 HOH A 47 347 347 HOH HOH . 
D 4 HOH A 48 348 348 HOH HOH . 
D 4 HOH A 49 349 349 HOH HOH . 
D 4 HOH A 50 350 350 HOH HOH . 
D 4 HOH A 51 351 351 HOH HOH . 
D 4 HOH A 52 352 352 HOH HOH . 
D 4 HOH A 53 353 353 HOH HOH . 
D 4 HOH A 54 354 354 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P1 A2P . . . B 2 -15.324 17.605 -5.602 1 29.05 ? P1 A2P 201 A 1 
HETATM 2 O O1P A2P . . . B 2 -14.636 17.231 -6.837 1 27.27 ? O1P A2P 201 A 1 
HETATM 3 O O2P A2P . . . B 2 -14.447 17.721 -4.355 1 29.38 ? O2P A2P 201 A 1 
HETATM 4 O O3P A2P . . . B 2 -16.515 16.671 -5.33 1 29.26 ? O3P A2P 201 A 1 
HETATM 5 P P2 A2P . . . B 2 -17.744 24.216 -9.615 1 67.31 ? P2 A2P 201 A 1 
HETATM 6 O O4P A2P . . . B 2 -18.251 23.704 -10.922 1 74.19 ? O4P A2P 201 A 1 
HETATM 7 O O5P A2P . . . B 2 -18.715 25.199 -8.93 1 71.91 ? O5P A2P 201 A 1 
HETATM 8 O O6P A2P . . . B 2 -16.361 24.879 -9.718 1 65.41 ? O6P A2P 201 A 1 
HETATM 9 O O5' A2P . . . B 2 -17.6 22.96 -8.596 1 57.16 ? O5' A2P 201 A 1 
HETATM 10 C C5' A2P . . . B 2 -16.762 23.039 -7.427 1 47.25 ? C5' A2P 201 A 1 
HETATM 11 C C4' A2P . . . B 2 -16.659 21.665 -6.812 1 30.34 ? C4' A2P 201 A 1 
HETATM 12 O O4' A2P . . . B 2 -17.927 21.309 -6.217 1 33.15 ? O4' A2P 201 A 1 
HETATM 13 C C3' A2P . . . B 2 -16.357 20.53 -7.782 1 29.67 ? C3' A2P 201 A 1 
HETATM 14 O O3' A2P . . . B 2 -14.967 20.393 -8.047 1 40.03 ? O3' A2P 201 A 1 
HETATM 15 C C2' A2P . . . B 2 -16.872 19.349 -6.97 1 31.86 ? C2' A2P 201 A 1 
HETATM 16 O O2' A2P . . . B 2 -15.979 19.065 -5.87 1 32.28 ? O2' A2P 201 A 1 
HETATM 17 C C1' A2P . . . B 2 -18.144 19.915 -6.353 1 32.34 ? C1' A2P 201 A 1 
HETATM 18 N N9 A2P . . . B 2 -19.314 19.725 -7.197 1 30.33 ? N9 A2P 201 A 1 
HETATM 19 C C8 A2P . . . B 2 -19.819 20.613 -8.11 1 35.49 ? C8 A2P 201 A 1 
HETATM 20 N N7 A2P . . . B 2 -20.9 20.195 -8.723 1 38.55 ? N7 A2P 201 A 1 
HETATM 21 C C5 A2P . . . B 2 -21.121 18.938 -8.177 1 34.03 ? C5 A2P 201 A 1 
HETATM 22 C C6 A2P . . . B 2 -22.111 17.966 -8.407 1 30.73 ? C6 A2P 201 A 1 
HETATM 23 N N6 A2P . . . B 2 -23.141 18.139 -9.25 1 34.98 ? N6 A2P 201 A 1 
HETATM 24 N N1 A2P . . . B 2 -22.031 16.812 -7.712 1 25.58 ? N1 A2P 201 A 1 
HETATM 25 C C2 A2P . . . B 2 -21.028 16.656 -6.84 1 27.14 ? C2 A2P 201 A 1 
HETATM 26 N N3 A2P . . . B 2 -20.045 17.507 -6.533 1 26.91 ? N3 A2P 201 A 1 
HETATM 27 C C4 A2P . . . B 2 -20.148 18.635 -7.239 1 29.56 ? C4 A2P 201 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           238 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           27 
#