data_6O1S # _model_server_result.job_id -r5rONbIvQVVtXlQDQGUCg _model_server_result.datetime_utc '2024-11-05 19:52:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6o1s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":802}' # _entry.id 6O1S # _exptl.entry_id 6O1S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6O1S _cell.length_a 55.685 _cell.length_b 57.45 _cell.length_c 86.215 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6O1S _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 44 E CYS 419 1_555 A SG CYS 60 E CYS 435 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf2 A SG CYS 142 E CYS 517 1_555 A SG CYS 209 E CYS 584 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf3 A SG CYS 173 E CYS 548 1_555 A SG CYS 188 E CYS 563 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 A SG CYS 199 E CYS 574 1_555 A SG CYS 227 E CYS 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 142 n n C1 C2 EDO sing 143 n n C1 H11 EDO sing 144 n n C1 H12 EDO sing 145 n n O1 HO1 EDO sing 146 n n C2 O2 EDO sing 147 n n C2 H21 EDO sing 148 n n C2 H22 EDO sing 149 n n O2 HO2 EDO sing 150 n n # _atom_sites.entry_id 6O1S _atom_sites.fract_transf_matrix[1][1] 0.017958 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017406 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011599 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 E 1 801 801 PO4 PO4 . C 3 EDO E 1 802 901 EDO EDO . D 4 7SD E 1 803 1 7SD GBT . E 5 HOH E 1 901 208 HOH HOH . E 5 HOH E 2 902 27 HOH HOH . E 5 HOH E 3 903 227 HOH HOH . E 5 HOH E 4 904 180 HOH HOH . E 5 HOH E 5 905 212 HOH HOH . E 5 HOH E 6 906 22 HOH HOH . E 5 HOH E 7 907 164 HOH HOH . E 5 HOH E 8 908 159 HOH HOH . E 5 HOH E 9 909 107 HOH HOH . E 5 HOH E 10 910 86 HOH HOH . E 5 HOH E 11 911 120 HOH HOH . E 5 HOH E 12 912 117 HOH HOH . E 5 HOH E 13 913 43 HOH HOH . E 5 HOH E 14 914 105 HOH HOH . E 5 HOH E 15 915 191 HOH HOH . E 5 HOH E 16 916 190 HOH HOH . E 5 HOH E 17 917 88 HOH HOH . E 5 HOH E 18 918 47 HOH HOH . E 5 HOH E 19 919 28 HOH HOH . E 5 HOH E 20 920 200 HOH HOH . E 5 HOH E 21 921 110 HOH HOH . E 5 HOH E 22 922 75 HOH HOH . E 5 HOH E 23 923 81 HOH HOH . E 5 HOH E 24 924 84 HOH HOH . E 5 HOH E 25 925 34 HOH HOH . E 5 HOH E 26 926 69 HOH HOH . E 5 HOH E 27 927 144 HOH HOH . E 5 HOH E 28 928 15 HOH HOH . E 5 HOH E 29 929 12 HOH HOH . E 5 HOH E 30 930 30 HOH HOH . E 5 HOH E 31 931 10 HOH HOH . E 5 HOH E 32 932 45 HOH HOH . E 5 HOH E 33 933 68 HOH HOH . E 5 HOH E 34 934 157 HOH HOH . E 5 HOH E 35 935 4 HOH HOH . E 5 HOH E 36 936 55 HOH HOH . E 5 HOH E 37 937 29 HOH HOH . E 5 HOH E 38 938 194 HOH HOH . E 5 HOH E 39 939 114 HOH HOH . E 5 HOH E 40 940 6 HOH HOH . E 5 HOH E 41 941 182 HOH HOH . E 5 HOH E 42 942 141 HOH HOH . E 5 HOH E 43 943 5 HOH HOH . E 5 HOH E 44 944 150 HOH HOH . E 5 HOH E 45 945 58 HOH HOH . E 5 HOH E 46 946 219 HOH HOH . E 5 HOH E 47 947 214 HOH HOH . E 5 HOH E 48 948 77 HOH HOH . E 5 HOH E 49 949 94 HOH HOH . E 5 HOH E 50 950 8 HOH HOH . E 5 HOH E 51 951 13 HOH HOH . E 5 HOH E 52 952 125 HOH HOH . E 5 HOH E 53 953 65 HOH HOH . E 5 HOH E 54 954 38 HOH HOH . E 5 HOH E 55 955 50 HOH HOH . E 5 HOH E 56 956 33 HOH HOH . E 5 HOH E 57 957 16 HOH HOH . E 5 HOH E 58 958 63 HOH HOH . E 5 HOH E 59 959 2 HOH HOH . E 5 HOH E 60 960 19 HOH HOH . E 5 HOH E 61 961 46 HOH HOH . E 5 HOH E 62 962 64 HOH HOH . E 5 HOH E 63 963 210 HOH HOH . E 5 HOH E 64 964 97 HOH HOH . E 5 HOH E 65 965 118 HOH HOH . E 5 HOH E 66 966 67 HOH HOH . E 5 HOH E 67 967 59 HOH HOH . E 5 HOH E 68 968 32 HOH HOH . E 5 HOH E 69 969 56 HOH HOH . E 5 HOH E 70 970 113 HOH HOH . E 5 HOH E 71 971 24 HOH HOH . E 5 HOH E 72 972 26 HOH HOH . E 5 HOH E 73 973 20 HOH HOH . E 5 HOH E 74 974 66 HOH HOH . E 5 HOH E 75 975 17 HOH HOH . E 5 HOH E 76 976 231 HOH HOH . E 5 HOH E 77 977 7 HOH HOH . E 5 HOH E 78 978 53 HOH HOH . E 5 HOH E 79 979 195 HOH HOH . E 5 HOH E 80 980 185 HOH HOH . E 5 HOH E 81 981 36 HOH HOH . E 5 HOH E 82 982 51 HOH HOH . E 5 HOH E 83 983 148 HOH HOH . E 5 HOH E 84 984 199 HOH HOH . E 5 HOH E 85 985 31 HOH HOH . E 5 HOH E 86 986 21 HOH HOH . E 5 HOH E 87 987 122 HOH HOH . E 5 HOH E 88 988 23 HOH HOH . E 5 HOH E 89 989 226 HOH HOH . E 5 HOH E 90 990 79 HOH HOH . E 5 HOH E 91 991 39 HOH HOH . E 5 HOH E 92 992 123 HOH HOH . E 5 HOH E 93 993 62 HOH HOH . E 5 HOH E 94 994 115 HOH HOH . E 5 HOH E 95 995 160 HOH HOH . E 5 HOH E 96 996 83 HOH HOH . E 5 HOH E 97 997 213 HOH HOH . E 5 HOH E 98 998 71 HOH HOH . E 5 HOH E 99 999 198 HOH HOH . E 5 HOH E 100 1000 70 HOH HOH . E 5 HOH E 101 1001 57 HOH HOH . E 5 HOH E 102 1002 18 HOH HOH . E 5 HOH E 103 1003 52 HOH HOH . E 5 HOH E 104 1004 82 HOH HOH . E 5 HOH E 105 1005 124 HOH HOH . E 5 HOH E 106 1006 140 HOH HOH . E 5 HOH E 107 1007 3 HOH HOH . E 5 HOH E 108 1008 181 HOH HOH . E 5 HOH E 109 1009 228 HOH HOH . E 5 HOH E 110 1010 202 HOH HOH . E 5 HOH E 111 1011 14 HOH HOH . E 5 HOH E 112 1012 232 HOH HOH . E 5 HOH E 113 1013 177 HOH HOH . E 5 HOH E 114 1014 121 HOH HOH . E 5 HOH E 115 1015 1 HOH HOH . E 5 HOH E 116 1016 205 HOH HOH . E 5 HOH E 117 1017 92 HOH HOH . E 5 HOH E 118 1018 116 HOH HOH . E 5 HOH E 119 1019 73 HOH HOH . E 5 HOH E 120 1020 74 HOH HOH . E 5 HOH E 121 1021 108 HOH HOH . E 5 HOH E 122 1022 72 HOH HOH . E 5 HOH E 123 1023 128 HOH HOH . E 5 HOH E 124 1024 11 HOH HOH . E 5 HOH E 125 1025 111 HOH HOH . E 5 HOH E 126 1026 90 HOH HOH . E 5 HOH E 127 1027 188 HOH HOH . E 5 HOH E 128 1028 89 HOH HOH . E 5 HOH E 129 1029 174 HOH HOH . E 5 HOH E 130 1030 54 HOH HOH . E 5 HOH E 131 1031 203 HOH HOH . E 5 HOH E 132 1032 25 HOH HOH . E 5 HOH E 133 1033 99 HOH HOH . E 5 HOH E 134 1034 48 HOH HOH . E 5 HOH E 135 1035 35 HOH HOH . E 5 HOH E 136 1036 101 HOH HOH . E 5 HOH E 137 1037 103 HOH HOH . E 5 HOH E 138 1038 41 HOH HOH . E 5 HOH E 139 1039 196 HOH HOH . E 5 HOH E 140 1040 171 HOH HOH . E 5 HOH E 141 1041 166 HOH HOH . E 5 HOH E 142 1042 42 HOH HOH . E 5 HOH E 143 1043 137 HOH HOH . E 5 HOH E 144 1044 60 HOH HOH . E 5 HOH E 145 1045 93 HOH HOH . E 5 HOH E 146 1046 100 HOH HOH . E 5 HOH E 147 1047 37 HOH HOH . E 5 HOH E 148 1048 229 HOH HOH . E 5 HOH E 149 1049 207 HOH HOH . E 5 HOH E 150 1050 193 HOH HOH . E 5 HOH E 151 1051 165 HOH HOH . E 5 HOH E 152 1052 156 HOH HOH . E 5 HOH E 153 1053 142 HOH HOH . E 5 HOH E 154 1054 175 HOH HOH . E 5 HOH E 155 1055 176 HOH HOH . E 5 HOH E 156 1056 104 HOH HOH . E 5 HOH E 157 1057 170 HOH HOH . E 5 HOH E 158 1058 134 HOH HOH . E 5 HOH E 159 1059 91 HOH HOH . E 5 HOH E 160 1060 162 HOH HOH . E 5 HOH E 161 1061 127 HOH HOH . E 5 HOH E 162 1062 130 HOH HOH . E 5 HOH E 163 1063 186 HOH HOH . E 5 HOH E 164 1064 225 HOH HOH . E 5 HOH E 165 1065 119 HOH HOH . E 5 HOH E 166 1066 230 HOH HOH . E 5 HOH E 167 1067 146 HOH HOH . E 5 HOH E 168 1068 173 HOH HOH . E 5 HOH E 169 1069 222 HOH HOH . E 5 HOH E 170 1070 201 HOH HOH . E 5 HOH E 171 1071 139 HOH HOH . E 5 HOH E 172 1072 138 HOH HOH . E 5 HOH E 173 1073 221 HOH HOH . E 5 HOH E 174 1074 192 HOH HOH . E 5 HOH E 175 1075 163 HOH HOH . E 5 HOH E 176 1076 183 HOH HOH . E 5 HOH E 177 1077 112 HOH HOH . E 5 HOH E 178 1078 172 HOH HOH . E 5 HOH E 179 1079 95 HOH HOH . E 5 HOH E 180 1080 87 HOH HOH . E 5 HOH E 181 1081 136 HOH HOH . E 5 HOH E 182 1082 223 HOH HOH . E 5 HOH E 183 1083 158 HOH HOH . E 5 HOH E 184 1084 109 HOH HOH . E 5 HOH E 185 1085 211 HOH HOH . E 5 HOH E 186 1086 206 HOH HOH . E 5 HOH E 187 1087 49 HOH HOH . E 5 HOH E 188 1088 126 HOH HOH . E 5 HOH E 189 1089 98 HOH HOH . E 5 HOH E 190 1090 187 HOH HOH . E 5 HOH E 191 1091 197 HOH HOH . E 5 HOH E 192 1092 209 HOH HOH . E 5 HOH E 193 1093 102 HOH HOH . E 5 HOH E 194 1094 167 HOH HOH . E 5 HOH E 195 1095 40 HOH HOH . E 5 HOH E 196 1096 132 HOH HOH . E 5 HOH E 197 1097 215 HOH HOH . E 5 HOH E 198 1098 61 HOH HOH . E 5 HOH E 199 1099 106 HOH HOH . E 5 HOH E 200 1100 168 HOH HOH . E 5 HOH E 201 1101 85 HOH HOH . E 5 HOH E 202 1102 153 HOH HOH . E 5 HOH E 203 1103 133 HOH HOH . E 5 HOH E 204 1104 129 HOH HOH . E 5 HOH E 205 1105 184 HOH HOH . E 5 HOH E 206 1106 204 HOH HOH . E 5 HOH E 207 1107 179 HOH HOH . E 5 HOH E 208 1108 155 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 -24.532 -14.998 4.569 1 48.37 ? C1 EDO 802 E 1 HETATM 2 O O1 EDO . . . C 3 -24.907 -13.615 4.633 1 43.46 ? O1 EDO 802 E 1 HETATM 3 C C2 EDO . . . C 3 -23.197 -15.182 3.851 1 42.78 ? C2 EDO 802 E 1 HETATM 4 O O2 EDO . . . C 3 -23.315 -14.945 2.443 1 47.04 ? O2 EDO 802 E 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 228 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #