data_6O1V # _model_server_result.job_id MOsvJe7bgToY6PmJ-4n58Q _model_server_result.datetime_utc '2024-11-26 20:57:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6o1v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":2005}' # _entry.id 6O1V # _exptl.entry_id 6O1V _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 507.181 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6O1V _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6O1V _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 465 A THR 465 1_555 D MG MG . A MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc2 A OE1 GLN 493 A GLN 493 1_555 D MG MG . A MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc3 A OG SER 1251 A SER 1251 1_555 E MG MG . A MG 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc4 A OE1 GLN 1291 A GLN 1291 1_555 E MG MG . A MG 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? metalc ? metalc5 D MG MG . A MG 2002 1_555 F O3G ATP . A ATP 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc6 D MG MG . A MG 2002 1_555 F O2B ATP . A ATP 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc7 E MG MG . A MG 2003 1_555 G O2B ATP . A ATP 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.933 ? metalc ? metalc8 E MG MG . A MG 2003 1_555 G O3G ATP . A ATP 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ATP doub 70 n n PG O2G ATP sing 71 n n PG O3G ATP sing 72 n n PG O3B ATP sing 73 n n O2G HOG2 ATP sing 74 n n O3G HOG3 ATP sing 75 n n PB O1B ATP doub 76 n n PB O2B ATP sing 77 n n PB O3B ATP sing 78 n n PB O3A ATP sing 79 n n O2B HOB2 ATP sing 80 n n PA O1A ATP doub 81 n n PA O2A ATP sing 82 n n PA O3A ATP sing 83 n n PA O5' ATP sing 84 n n O2A HOA2 ATP sing 85 n n O5' C5' ATP sing 86 n n C5' C4' ATP sing 87 n n C5' "H5'1" ATP sing 88 n n C5' "H5'2" ATP sing 89 n n C4' O4' ATP sing 90 n n C4' C3' ATP sing 91 n n C4' H4' ATP sing 92 n n O4' C1' ATP sing 93 n n C3' O3' ATP sing 94 n n C3' C2' ATP sing 95 n n C3' H3' ATP sing 96 n n O3' HO3' ATP sing 97 n n C2' O2' ATP sing 98 n n C2' C1' ATP sing 99 n n C2' H2' ATP sing 100 n n O2' HO2' ATP sing 101 n n C1' N9 ATP sing 102 n n C1' H1' ATP sing 103 n n N9 C8 ATP sing 104 n y N9 C4 ATP sing 105 n y C8 N7 ATP doub 106 n y C8 H8 ATP sing 107 n n N7 C5 ATP sing 108 n y C5 C6 ATP sing 109 n y C5 C4 ATP doub 110 n y C6 N6 ATP sing 111 n n C6 N1 ATP doub 112 n y N6 HN61 ATP sing 113 n n N6 HN62 ATP sing 114 n n N1 C2 ATP sing 115 n y C2 N3 ATP doub 116 n y C2 H2 ATP sing 117 n n N3 C4 ATP sing 118 n y # _atom_sites.entry_id 6O1V _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 LJP A 1 2001 2001 LJP BBV . D 4 MG A 1 2002 1 MG MG . E 4 MG A 1 2003 2 MG MG . F 5 ATP A 1 2004 1 ATP ATP . G 5 ATP A 1 2005 2 ATP ATP . H 6 POV A 1 2006 1 POV POV . I 6 POV A 1 2007 2 POV POV . J 6 POV A 1 2008 3 POV POV . K 6 POV A 1 2009 4 POV POV . L 6 POV A 1 2010 5 POV POV . M 7 CLR A 1 2011 6 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . G 5 143.064 154.811 101.72 1 156.09 ? PG ATP 2005 A 1 HETATM 2 O O1G ATP . . . G 5 142.622 154.792 100.285 1 155.99 ? O1G ATP 2005 A 1 HETATM 3 O O2G ATP . . . G 5 143.651 156.13 102.15 1 159.46 ? O2G ATP 2005 A 1 HETATM 4 O O3G ATP . . . G 5 143.938 153.634 102.071 1 159.7 ? O3G ATP 2005 A 1 HETATM 5 P PB ATP . . . G 5 140.921 153.254 102.763 1 141.85 ? PB ATP 2005 A 1 HETATM 6 O O1B ATP . . . G 5 140.327 152.854 101.461 1 123.54 ? O1B ATP 2005 A 1 HETATM 7 O O2B ATP . . . G 5 141.849 152.323 103.466 1 147.66 ? O2B ATP 2005 A 1 HETATM 8 O O3B ATP . . . G 5 141.706 154.628 102.552 1 152.77 ? O3B ATP 2005 A 1 HETATM 9 P PA ATP . . . G 5 139.371 152.757 105.062 1 150.71 ? PA ATP 2005 A 1 HETATM 10 O O1A ATP . . . G 5 139.224 151.353 104.579 1 156.09 ? O1A ATP 2005 A 1 HETATM 11 O O2A ATP . . . G 5 140.375 152.991 106.143 1 159.52 ? O2A ATP 2005 A 1 HETATM 12 O O3A ATP . . . G 5 139.765 153.652 103.794 1 143.13 ? O3A ATP 2005 A 1 HETATM 13 O O5' ATP . . . G 5 137.939 153.3 105.554 1 146.76 ? O5' ATP 2005 A 1 HETATM 14 C C5' ATP . . . G 5 137.099 154.225 104.824 1 145.62 ? C5' ATP 2005 A 1 HETATM 15 C C4' ATP . . . G 5 136.41 155.122 105.82 1 146.76 ? C4' ATP 2005 A 1 HETATM 16 O O4' ATP . . . G 5 136.072 154.362 107.004 1 147.68 ? O4' ATP 2005 A 1 HETATM 17 C C3' ATP . . . G 5 137.255 156.288 106.334 1 149.72 ? C3' ATP 2005 A 1 HETATM 18 O O3' ATP . . . G 5 137.085 157.393 105.458 1 163.07 ? O3' ATP 2005 A 1 HETATM 19 C C2' ATP . . . G 5 136.7 156.537 107.742 1 151.23 ? C2' ATP 2005 A 1 HETATM 20 O O2' ATP . . . G 5 135.667 157.498 107.776 1 162.34 ? O2' ATP 2005 A 1 HETATM 21 C C1' ATP . . . G 5 136.158 155.169 108.158 1 150.15 ? C1' ATP 2005 A 1 HETATM 22 N N9 ATP . . . G 5 137.007 154.48 109.126 1 146.82 ? N9 ATP 2005 A 1 HETATM 23 C C8 ATP . . . G 5 138.224 153.892 108.876 1 148.61 ? C8 ATP 2005 A 1 HETATM 24 N N7 ATP . . . G 5 138.747 153.346 109.95 1 144.18 ? N7 ATP 2005 A 1 HETATM 25 C C5 ATP . . . G 5 137.823 153.592 110.959 1 142.63 ? C5 ATP 2005 A 1 HETATM 26 C C6 ATP . . . G 5 137.802 153.27 112.331 1 137.54 ? C6 ATP 2005 A 1 HETATM 27 N N6 ATP . . . G 5 138.772 152.599 112.944 1 135.41 ? N6 ATP 2005 A 1 HETATM 28 N N1 ATP . . . G 5 136.725 153.673 113.053 1 136.99 ? N1 ATP 2005 A 1 HETATM 29 C C2 ATP . . . G 5 135.748 154.348 112.427 1 135.53 ? C2 ATP 2005 A 1 HETATM 30 N N3 ATP . . . G 5 135.66 154.705 111.147 1 137.2 ? N3 ATP 2005 A 1 HETATM 31 C C4 ATP . . . G 5 136.743 154.293 110.459 1 146.11 ? C4 ATP 2005 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #