data_6O1V # _model_server_result.job_id RFxMQ8251eF-kG4ZrzHWAA _model_server_result.datetime_utc '2024-11-26 20:59:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6o1v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":2009}' # _entry.id 6O1V # _exptl.entry_id 6O1V _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 760.076 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6O1V _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6O1V _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 H N N ? 6 I N N ? 6 J N N ? 6 K N N ? 6 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 465 A THR 465 1_555 D MG MG . A MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc2 A OE1 GLN 493 A GLN 493 1_555 D MG MG . A MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc3 A OG SER 1251 A SER 1251 1_555 E MG MG . A MG 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc4 A OE1 GLN 1291 A GLN 1291 1_555 E MG MG . A MG 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? metalc ? metalc5 D MG MG . A MG 2002 1_555 F O3G ATP . A ATP 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc6 D MG MG . A MG 2002 1_555 F O2B ATP . A ATP 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc7 E MG MG . A MG 2003 1_555 G O2B ATP . A ATP 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.933 ? metalc ? metalc8 E MG MG . A MG 2003 1_555 G O3G ATP . A ATP 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? # _chem_comp.formula 'C42 H82 N O8 P' _chem_comp.formula_weight 760.076 _chem_comp.id POV _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms POPC # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C12 POV sing 430 n n N C13 POV sing 431 n n N C14 POV sing 432 n n N C15 POV sing 433 n n P O11 POV sing 434 n n P O12 POV sing 435 n n P O13 POV sing 436 n n P O14 POV doub 437 n n C1 C2 POV sing 438 n n C1 O11 POV sing 439 n n C1 H1 POV sing 440 n n C1 H1A POV sing 441 n n C2 C3 POV sing 442 n n C2 O21 POV sing 443 n n C2 H2 POV sing 444 n n C3 O31 POV sing 445 n n C3 H3 POV sing 446 n n C3 H3A POV sing 447 n n C210 C211 POV sing 448 n n C210 C29 POV doub 449 z n C210 H210 POV sing 450 n n C310 C311 POV sing 451 n n C310 C39 POV sing 452 n n C310 H310 POV sing 453 n n C310 H31A POV sing 454 n n C11 C12 POV sing 455 n n C11 O12 POV sing 456 n n C11 H11 POV sing 457 n n C11 H11A POV sing 458 n n C211 C212 POV sing 459 n n C211 H211 POV sing 460 n n C211 H21A POV sing 461 n n C311 C312 POV sing 462 n n C311 H311 POV sing 463 n n C311 H31B POV sing 464 n n C12 H12 POV sing 465 n n C12 H12A POV sing 466 n n C212 C213 POV sing 467 n n C212 H212 POV sing 468 n n C212 H21B POV sing 469 n n C312 C313 POV sing 470 n n C312 H312 POV sing 471 n n C312 H31C POV sing 472 n n C13 H13 POV sing 473 n n C13 H13A POV sing 474 n n C13 H13B POV sing 475 n n C213 C214 POV sing 476 n n C213 H213 POV sing 477 n n C213 H21C POV sing 478 n n C313 C314 POV sing 479 n n C313 H313 POV sing 480 n n C313 H31D POV sing 481 n n C14 H14 POV sing 482 n n C14 H14A POV sing 483 n n C14 H14B POV sing 484 n n C214 C215 POV sing 485 n n C214 H214 POV sing 486 n n C214 H21D POV sing 487 n n C314 C315 POV sing 488 n n C314 H314 POV sing 489 n n C314 H31E POV sing 490 n n C15 H15 POV sing 491 n n C15 H15A POV sing 492 n n C15 H15B POV sing 493 n n C215 C216 POV sing 494 n n C215 H215 POV sing 495 n n C215 H21E POV sing 496 n n C315 C316 POV sing 497 n n C315 H315 POV sing 498 n n C315 H31F POV sing 499 n n C216 C217 POV sing 500 n n C216 H216 POV sing 501 n n C216 H21F POV sing 502 n n C316 H316 POV sing 503 n n C316 H31G POV sing 504 n n C316 H31H POV sing 505 n n C217 C218 POV sing 506 n n C217 H217 POV sing 507 n n C217 H21G POV sing 508 n n C218 H218 POV sing 509 n n C218 H21H POV sing 510 n n C218 H21J POV sing 511 n n C21 O21 POV sing 512 n n C21 C22 POV sing 513 n n C21 O22 POV doub 514 n n C22 C23 POV sing 515 n n C22 H22 POV sing 516 n n C22 H22A POV sing 517 n n C23 C24 POV sing 518 n n C23 H23 POV sing 519 n n C23 H23A POV sing 520 n n C24 C25 POV sing 521 n n C24 H24 POV sing 522 n n C24 H24A POV sing 523 n n C25 C26 POV sing 524 n n C25 H25 POV sing 525 n n C25 H25A POV sing 526 n n C26 C27 POV sing 527 n n C26 H26 POV sing 528 n n C26 H26A POV sing 529 n n C27 C28 POV sing 530 n n C27 H27 POV sing 531 n n C27 H27A POV sing 532 n n C28 C29 POV sing 533 n n C28 H28 POV sing 534 n n C28 H28A POV sing 535 n n C29 H29 POV sing 536 n n C31 O31 POV sing 537 n n C31 C32 POV sing 538 n n C31 O32 POV doub 539 n n C32 C33 POV sing 540 n n C32 H32 POV sing 541 n n C32 H32A POV sing 542 n n C33 C34 POV sing 543 n n C33 H33 POV sing 544 n n C33 H33A POV sing 545 n n C34 C35 POV sing 546 n n C34 H34 POV sing 547 n n C34 H34A POV sing 548 n n C35 C36 POV sing 549 n n C35 H35 POV sing 550 n n C35 H35A POV sing 551 n n C36 C37 POV sing 552 n n C36 H36 POV sing 553 n n C36 H36A POV sing 554 n n C37 C38 POV sing 555 n n C37 H37 POV sing 556 n n C37 H37A POV sing 557 n n C38 C39 POV sing 558 n n C38 H38 POV sing 559 n n C38 H38A POV sing 560 n n C39 H39 POV sing 561 n n C39 H39A POV sing 562 n n # _atom_sites.entry_id 6O1V _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 LJP A 1 2001 2001 LJP BBV . D 4 MG A 1 2002 1 MG MG . E 4 MG A 1 2003 2 MG MG . F 5 ATP A 1 2004 1 ATP ATP . G 5 ATP A 1 2005 2 ATP ATP . H 6 POV A 1 2006 1 POV POV . I 6 POV A 1 2007 2 POV POV . J 6 POV A 1 2008 3 POV POV . K 6 POV A 1 2009 4 POV POV . L 6 POV A 1 2010 5 POV POV . M 7 CLR A 1 2011 6 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C310 POV . . . K 6 172.835 157.996 164.487 1 151.12 ? C310 POV 2009 A 1 HETATM 2 C C311 POV . . . K 6 171.661 157.624 165.413 1 150.1 ? C311 POV 2009 A 1 HETATM 3 C C312 POV . . . K 6 170.65 158.764 165.517 1 144.25 ? C312 POV 2009 A 1 HETATM 4 C C32 POV . . . K 6 177.115 158.073 155.894 1 140.04 ? C32 POV 2009 A 1 HETATM 5 C C33 POV . . . K 6 176.726 156.943 156.852 1 147.9 ? C33 POV 2009 A 1 HETATM 6 C C34 POV . . . K 6 175.747 157.476 157.915 1 155.45 ? C34 POV 2009 A 1 HETATM 7 C C35 POV . . . K 6 175.486 156.46 159.052 1 155.15 ? C35 POV 2009 A 1 HETATM 8 C C36 POV . . . K 6 175.172 157.234 160.346 1 153.39 ? C36 POV 2009 A 1 HETATM 9 C C37 POV . . . K 6 174.517 156.354 161.43 1 150.86 ? C37 POV 2009 A 1 HETATM 10 C C38 POV . . . K 6 174.488 157.155 162.753 1 152.45 ? C38 POV 2009 A 1 HETATM 11 C C39 POV . . . K 6 173.298 156.779 163.665 1 152.38 ? C39 POV 2009 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 405 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #