data_6O29
#
_model_server_result.job_id            Au4GdrLQUdgjhzUUwChq_Q 
_model_server_result.datetime_utc      '2025-09-01 03:49:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6o29 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":301}' 
#
_entry.id    6O29 
#
_exptl.entry_id    6O29 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6O29 
_cell.length_a            54.537 
_cell.length_b            79.761 
_cell.length_c            281.795 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6O29 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? tetrameric 4 author_defined_assembly 1 
? tetrameric 4 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,G,I,J,K,L,M,P,Q 1 1 
C,D,F,H,N,O,R 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 I N N 
? 5 J N N 
? 5 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 98 A CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 A SG CYS 149 A CYS 140 1_555 A SG CYS 205 A CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 B SG CYS 23 B CYS 23 1_555 B SG CYS 89 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
disulf ? disulf4 B SG CYS 135 B CYS 134 1_555 B SG CYS 195 B CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf5 C SG CYS 22 H CYS 22 1_555 C SG CYS 98 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf6 C SG CYS 149 H CYS 140 1_555 C SG CYS 205 H CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf7 D SG CYS 23 L CYS 23 1_555 D SG CYS 89 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf8 D SG CYS 135 L CYS 134 1_555 D SG CYS 195 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf9 G SG CYS 22 K CYS 22 1_555 G SG CYS 96 K CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf10 H SG CYS 22 E CYS 22 1_555 H SG CYS 96 E CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     6O29 
_atom_sites.fract_transf_matrix[1][1]    0.018336 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012537 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003549 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 5 EDO A 1 301 301 EDO EDO . 
J 5 EDO B 1 301 301 EDO EDO . 
K 5 EDO K 1 301 301 EDO EDO . 
L 6 HOH A 1 401 126 HOH HOH . 
L 6 HOH A 2 402 34 HOH HOH . 
L 6 HOH A 3 403 79 HOH HOH . 
L 6 HOH A 4 404 60 HOH HOH . 
L 6 HOH A 5 405 64 HOH HOH . 
L 6 HOH A 6 406 92 HOH HOH . 
L 6 HOH A 7 407 28 HOH HOH . 
L 6 HOH A 8 408 128 HOH HOH . 
M 6 HOH B 1 401 106 HOH HOH . 
M 6 HOH B 2 402 93 HOH HOH . 
M 6 HOH B 3 403 5 HOH HOH . 
M 6 HOH B 4 404 39 HOH HOH . 
M 6 HOH B 5 405 21 HOH HOH . 
M 6 HOH B 6 406 94 HOH HOH . 
M 6 HOH B 7 407 107 HOH HOH . 
M 6 HOH B 8 408 108 HOH HOH . 
M 6 HOH B 9 409 42 HOH HOH . 
M 6 HOH B 10 410 58 HOH HOH . 
M 6 HOH B 11 411 35 HOH HOH . 
M 6 HOH B 12 412 111 HOH HOH . 
M 6 HOH B 13 413 48 HOH HOH . 
M 6 HOH B 14 414 46 HOH HOH . 
M 6 HOH B 15 415 97 HOH HOH . 
M 6 HOH B 16 416 78 HOH HOH . 
M 6 HOH B 17 417 70 HOH HOH . 
M 6 HOH B 18 418 9 HOH HOH . 
M 6 HOH B 19 419 99 HOH HOH . 
M 6 HOH B 20 420 96 HOH HOH . 
M 6 HOH B 21 421 112 HOH HOH . 
M 6 HOH B 22 422 36 HOH HOH . 
M 6 HOH B 23 423 84 HOH HOH . 
M 6 HOH B 24 424 109 HOH HOH . 
M 6 HOH B 25 425 110 HOH HOH . 
M 6 HOH B 26 426 44 HOH HOH . 
M 6 HOH B 27 427 127 HOH HOH . 
M 6 HOH B 28 428 51 HOH HOH . 
M 6 HOH B 29 429 113 HOH HOH . 
N 6 HOH H 1 301 17 HOH HOH . 
N 6 HOH H 2 302 67 HOH HOH . 
N 6 HOH H 3 303 81 HOH HOH . 
N 6 HOH H 4 304 105 HOH HOH . 
N 6 HOH H 5 305 65 HOH HOH . 
N 6 HOH H 6 306 88 HOH HOH . 
N 6 HOH H 7 307 80 HOH HOH . 
N 6 HOH H 8 308 59 HOH HOH . 
N 6 HOH H 9 309 125 HOH HOH . 
N 6 HOH H 10 310 85 HOH HOH . 
N 6 HOH H 11 311 87 HOH HOH . 
N 6 HOH H 12 312 6 HOH HOH . 
N 6 HOH H 13 313 24 HOH HOH . 
N 6 HOH H 14 314 68 HOH HOH . 
N 6 HOH H 15 315 49 HOH HOH . 
N 6 HOH H 16 316 62 HOH HOH . 
N 6 HOH H 17 317 43 HOH HOH . 
N 6 HOH H 18 318 91 HOH HOH . 
O 6 HOH L 1 301 75 HOH HOH . 
O 6 HOH L 2 302 26 HOH HOH . 
O 6 HOH L 3 303 76 HOH HOH . 
O 6 HOH L 4 304 1 HOH HOH . 
O 6 HOH L 5 305 116 HOH HOH . 
O 6 HOH L 6 306 57 HOH HOH . 
O 6 HOH L 7 307 54 HOH HOH . 
O 6 HOH L 8 308 98 HOH HOH . 
O 6 HOH L 9 309 11 HOH HOH . 
O 6 HOH L 10 310 72 HOH HOH . 
O 6 HOH L 11 311 12 HOH HOH . 
O 6 HOH L 12 312 69 HOH HOH . 
O 6 HOH L 13 313 16 HOH HOH . 
O 6 HOH L 14 314 117 HOH HOH . 
O 6 HOH L 15 315 115 HOH HOH . 
O 6 HOH L 16 316 40 HOH HOH . 
O 6 HOH L 17 317 7 HOH HOH . 
O 6 HOH L 18 318 77 HOH HOH . 
O 6 HOH L 19 319 2 HOH HOH . 
O 6 HOH L 20 320 30 HOH HOH . 
O 6 HOH L 21 321 95 HOH HOH . 
O 6 HOH L 22 322 63 HOH HOH . 
O 6 HOH L 23 323 3 HOH HOH . 
O 6 HOH L 24 324 56 HOH HOH . 
O 6 HOH L 25 325 71 HOH HOH . 
O 6 HOH L 26 326 23 HOH HOH . 
O 6 HOH L 27 327 101 HOH HOH . 
O 6 HOH L 28 328 66 HOH HOH . 
O 6 HOH L 29 329 18 HOH HOH . 
O 6 HOH L 30 330 114 HOH HOH . 
P 6 HOH C 1 101 124 HOH HOH . 
Q 6 HOH K 1 401 14 HOH HOH . 
Q 6 HOH K 2 402 19 HOH HOH . 
Q 6 HOH K 3 403 119 HOH HOH . 
Q 6 HOH K 4 404 33 HOH HOH . 
Q 6 HOH K 5 405 8 HOH HOH . 
Q 6 HOH K 6 406 103 HOH HOH . 
Q 6 HOH K 7 407 25 HOH HOH . 
Q 6 HOH K 8 408 22 HOH HOH . 
Q 6 HOH K 9 409 74 HOH HOH . 
Q 6 HOH K 10 410 15 HOH HOH . 
Q 6 HOH K 11 411 83 HOH HOH . 
Q 6 HOH K 12 412 10 HOH HOH . 
Q 6 HOH K 13 413 45 HOH HOH . 
Q 6 HOH K 14 414 37 HOH HOH . 
Q 6 HOH K 15 415 118 HOH HOH . 
Q 6 HOH K 16 416 100 HOH HOH . 
Q 6 HOH K 17 417 104 HOH HOH . 
Q 6 HOH K 18 418 102 HOH HOH . 
R 6 HOH E 1 201 29 HOH HOH . 
R 6 HOH E 2 202 4 HOH HOH . 
R 6 HOH E 3 203 61 HOH HOH . 
R 6 HOH E 4 204 53 HOH HOH . 
R 6 HOH E 5 205 120 HOH HOH . 
R 6 HOH E 6 206 13 HOH HOH . 
R 6 HOH E 7 207 121 HOH HOH . 
R 6 HOH E 8 208 52 HOH HOH . 
R 6 HOH E 9 209 38 HOH HOH . 
R 6 HOH E 10 210 122 HOH HOH . 
R 6 HOH E 11 211 27 HOH HOH . 
R 6 HOH E 12 212 55 HOH HOH . 
R 6 HOH E 13 213 32 HOH HOH . 
R 6 HOH E 14 214 73 HOH HOH . 
R 6 HOH E 15 215 123 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . J 5 16.178 -8.991 97.765 1 65.69 ? C1 EDO 301 B 1 
HETATM 2 O O1 EDO . . . J 5 14.887 -8.457 98.082 1 64.74 ? O1 EDO 301 B 1 
HETATM 3 C C2 EDO . . . J 5 16.134 -9.64 96.386 1 67.44 ? C2 EDO 301 B 1 
HETATM 4 O O2 EDO . . . J 5 15.753 -8.658 95.415 1 66.55 ? O2 EDO 301 B 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           466 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#