data_6O2Y # _model_server_result.job_id ykbuIMaGS-DnKy7BttWs1w _model_server_result.datetime_utc '2025-01-12 04:27:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6o2y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":500}' # _entry.id 6O2Y # _exptl.entry_id 6O2Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 339.776 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-{[(6-chloro-2-oxo-1,2-dihydroquinolin-3-yl)methyl]amino}-2-methoxybenzonitrile _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.52 _cell.angle_gamma 90 _cell.entry_id 6O2Y _cell.length_a 165.679 _cell.length_b 63.496 _cell.length_c 143.598 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6O2Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,F,G,H,K,L 1 1 C,I,J,M 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 G N N ? 2 I N N # _chem_comp.formula 'C18 H14 Cl N3 O2' _chem_comp.formula_weight 339.776 _chem_comp.id LJY _chem_comp.mon_nstd_flag . _chem_comp.name 4-{[(6-chloro-2-oxo-1,2-dihydroquinolin-3-yl)methyl]amino}-2-methoxybenzonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 LJY sing 203 n n O1 C2 LJY sing 204 n n N3 C18 LJY trip 205 n n C18 C3 LJY sing 206 n n C2 C3 LJY doub 207 n y C2 C17 LJY sing 208 n y C3 C4 LJY sing 209 n y C17 C6 LJY doub 210 n y CL C15 LJY sing 211 n n C4 C5 LJY doub 212 n y C6 C5 LJY sing 213 n y C6 N1 LJY sing 214 n n C16 C15 LJY doub 215 n y C16 C10 LJY sing 216 n y N1 C7 LJY sing 217 n n C15 C14 LJY sing 218 n y C9 C10 LJY sing 219 n n C9 C8 LJY doub 220 n n C10 C11 LJY doub 221 n y C7 C8 LJY sing 222 n n C14 C13 LJY doub 223 n y C8 C12 LJY sing 224 n n C11 C13 LJY sing 225 n y C11 N2 LJY sing 226 n n C12 N2 LJY sing 227 n n C12 O2 LJY doub 228 n n C1 H1 LJY sing 229 n n C1 H2 LJY sing 230 n n C1 H3 LJY sing 231 n n C4 H4 LJY sing 232 n n C5 H5 LJY sing 233 n n C14 H6 LJY sing 234 n n C13 H7 LJY sing 235 n n C16 H8 LJY sing 236 n n N2 H9 LJY sing 237 n n C9 H10 LJY sing 238 n n C7 H11 LJY sing 239 n n C7 H12 LJY sing 240 n n N1 H13 LJY sing 241 n n C17 H14 LJY sing 242 n n # _atom_sites.entry_id 6O2Y _atom_sites.fract_transf_matrix[1][1] 0.006036 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001012 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015749 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007061 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 LJY A 1 500 500 LJY 010 . E 3 NAP A 1 501 501 NAP NDP . F 4 BME A 1 502 502 BME BME . G 2 LJY B 1 500 500 LJY 010 . H 3 NAP B 1 501 501 NAP NDP . I 2 LJY C 1 500 500 LJY 010 . J 3 NAP C 1 501 501 NAP NDP . K 5 HOH A 1 601 14 HOH HOH . K 5 HOH A 2 602 18 HOH HOH . K 5 HOH A 3 603 19 HOH HOH . K 5 HOH A 4 604 1 HOH HOH . K 5 HOH A 5 605 10 HOH HOH . K 5 HOH A 6 606 7 HOH HOH . K 5 HOH A 7 607 13 HOH HOH . K 5 HOH A 8 608 8 HOH HOH . K 5 HOH A 9 609 4 HOH HOH . K 5 HOH A 10 610 16 HOH HOH . K 5 HOH A 11 611 20 HOH HOH . K 5 HOH A 12 612 21 HOH HOH . L 5 HOH B 1 601 23 HOH HOH . L 5 HOH B 2 602 11 HOH HOH . L 5 HOH B 3 603 5 HOH HOH . L 5 HOH B 4 604 6 HOH HOH . L 5 HOH B 5 605 22 HOH HOH . L 5 HOH B 6 606 9 HOH HOH . L 5 HOH B 7 607 12 HOH HOH . L 5 HOH B 8 608 2 HOH HOH . M 5 HOH C 1 601 3 HOH HOH . M 5 HOH C 2 602 15 HOH HOH . M 5 HOH C 3 603 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LJY . . . I 2 -8.533 -48.261 6.03 1 70.6 ? C1 LJY 500 C 1 HETATM 2 C C2 LJY . . . I 2 -8.061 -46.829 4.051 1 59.13 ? C2 LJY 500 C 1 HETATM 3 C C3 LJY . . . I 2 -7.199 -46.706 2.966 1 57.76 ? C3 LJY 500 C 1 HETATM 4 C C4 LJY . . . I 2 -7.052 -45.504 2.297 1 57.17 ? C4 LJY 500 C 1 HETATM 5 C C5 LJY . . . I 2 -7.783 -44.401 2.706 1 57.58 ? C5 LJY 500 C 1 HETATM 6 C C6 LJY . . . I 2 -8.663 -44.504 3.794 1 56.33 ? C6 LJY 500 C 1 HETATM 7 CL CL LJY . . . I 2 -2.205 -41.954 6.267 1 76.04 ? CL LJY 500 C 1 HETATM 8 C C15 LJY . . . I 2 -3.48 -41.171 5.297 1 72.46 ? C15 LJY 500 C 1 HETATM 9 C C14 LJY . . . I 2 -3.274 -39.968 4.618 1 71.05 ? C14 LJY 500 C 1 HETATM 10 C C13 LJY . . . I 2 -4.318 -39.411 3.873 1 70.23 ? C13 LJY 500 C 1 HETATM 11 C C16 LJY . . . I 2 -4.703 -41.818 5.24 1 72.04 ? C16 LJY 500 C 1 HETATM 12 C C10 LJY . . . I 2 -5.737 -41.266 4.504 1 71.24 ? C10 LJY 500 C 1 HETATM 13 C C11 LJY . . . I 2 -5.555 -40.062 3.816 1 70.8 ? C11 LJY 500 C 1 HETATM 14 N N2 LJY . . . I 2 -6.589 -39.555 3.107 1 71.66 ? N2 LJY 500 C 1 HETATM 15 C C12 LJY . . . I 2 -7.791 -40.194 3.055 1 71.66 ? C12 LJY 500 C 1 HETATM 16 O O2 LJY . . . I 2 -8.713 -39.685 2.385 1 74.31 ? O2 LJY 500 C 1 HETATM 17 C C9 LJY . . . I 2 -6.952 -41.932 4.468 1 68.51 ? C9 LJY 500 C 1 HETATM 18 C C8 LJY . . . I 2 -8.01 -41.395 3.734 1 66.26 ? C8 LJY 500 C 1 HETATM 19 C C7 LJY . . . I 2 -9.37 -42.06 3.641 1 61.96 ? C7 LJY 500 C 1 HETATM 20 N N1 LJY . . . I 2 -9.434 -43.369 4.269 1 57.54 ? N1 LJY 500 C 1 HETATM 21 C C17 LJY . . . I 2 -8.799 -45.715 4.466 1 56.07 ? C17 LJY 500 C 1 HETATM 22 O O1 LJY . . . I 2 -8.152 -48.064 4.664 1 65.76 ? O1 LJY 500 C 1 HETATM 23 C C18 LJY . . . I 2 -6.518 -47.709 2.569 1 57.87 ? C18 LJY 500 C 1 HETATM 24 N N3 LJY . . . I 2 -5.908 -48.611 2.209 1 55.21 ? N3 LJY 500 C 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 24 #