data_6O34 # _model_server_result.job_id 6mkXeSjtkvtXJQ4oEhMomg _model_server_result.datetime_utc '2024-10-19 05:26:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6o34 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 6O34 # _exptl.entry_id 6O34 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 414.488 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NONAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6O34 _cell.length_a 48.951 _cell.length_b 48.951 _cell.length_c 137.421 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6O34 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ACE 1 B ACE 1 1_555 B N MEA 2 B MEA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 B C MEA 2 B MEA 2 1_555 B N YCP 3 B YCP 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 B C YCP 3 B YCP 3 1_555 B N TRP 4 B TRP 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale4 B C TRP 4 B TRP 4 1_555 B N CIR 5 B CIR 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale5 B C CIR 5 B CIR 5 1_555 B N NH2 6 B NH2 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C18 H38 O10' _chem_comp.formula_weight 414.488 _chem_comp.id 2PE _chem_comp.mon_nstd_flag . _chem_comp.name 'NONAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 2PE sing 1 n n O1 HO1 2PE sing 2 n n C2 C3 2PE sing 3 n n C2 H21 2PE sing 4 n n C2 H22 2PE sing 5 n n C3 O4 2PE sing 6 n n C3 H31 2PE sing 7 n n C3 H32 2PE sing 8 n n O4 C5 2PE sing 9 n n C5 C6 2PE sing 10 n n C5 H51 2PE sing 11 n n C5 H52 2PE sing 12 n n C6 O7 2PE sing 13 n n C6 H61 2PE sing 14 n n C6 H62 2PE sing 15 n n O7 C8 2PE sing 16 n n C8 C9 2PE sing 17 n n C8 H81 2PE sing 18 n n C8 H82 2PE sing 19 n n C9 O10 2PE sing 20 n n C9 H91 2PE sing 21 n n C9 H92 2PE sing 22 n n O10 C11 2PE sing 23 n n C11 C12 2PE sing 24 n n C11 H111 2PE sing 25 n n C11 H112 2PE sing 26 n n C12 O13 2PE sing 27 n n C12 H121 2PE sing 28 n n C12 H122 2PE sing 29 n n O13 C14 2PE sing 30 n n C14 C15 2PE sing 31 n n C14 H141 2PE sing 32 n n C14 H142 2PE sing 33 n n C15 O16 2PE sing 34 n n C15 H151 2PE sing 35 n n C15 H152 2PE sing 36 n n O16 C17 2PE sing 37 n n C17 C18 2PE sing 38 n n C17 H171 2PE sing 39 n n C17 H172 2PE sing 40 n n C18 O19 2PE sing 41 n n C18 H181 2PE sing 42 n n C18 H182 2PE sing 43 n n O19 C20 2PE sing 44 n n C20 C21 2PE sing 45 n n C20 H201 2PE sing 46 n n C20 H202 2PE sing 47 n n C21 O22 2PE sing 48 n n C21 H211 2PE sing 49 n n C21 H212 2PE sing 50 n n O22 C23 2PE sing 51 n n C23 C24 2PE sing 52 n n C23 H231 2PE sing 53 n n C23 H232 2PE sing 54 n n C24 O25 2PE sing 55 n n C24 H241 2PE sing 56 n n C24 H242 2PE sing 57 n n O25 C26 2PE sing 58 n n C26 C27 2PE sing 59 n n C26 H261 2PE sing 60 n n C26 H262 2PE sing 61 n n C27 O28 2PE sing 62 n n C27 H271 2PE sing 63 n n C27 H272 2PE sing 64 n n O28 HO2 2PE sing 65 n n # _atom_sites.entry_id 6O34 _atom_sites.fract_transf_matrix[1][1] 0.020428 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020428 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007277 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 2PE A 1 201 201 2PE 2PE . D 4 GOL A 1 202 202 GOL GOL . E 5 SO4 A 1 203 203 SO4 SO4 . F 6 HOH A 1 301 72 HOH HOH . F 6 HOH A 2 302 23 HOH HOH . F 6 HOH A 3 303 89 HOH HOH . F 6 HOH A 4 304 40 HOH HOH . F 6 HOH A 5 305 13 HOH HOH . F 6 HOH A 6 306 10 HOH HOH . F 6 HOH A 7 307 49 HOH HOH . F 6 HOH A 8 308 66 HOH HOH . F 6 HOH A 9 309 25 HOH HOH . F 6 HOH A 10 310 28 HOH HOH . F 6 HOH A 11 311 55 HOH HOH . F 6 HOH A 12 312 3 HOH HOH . F 6 HOH A 13 313 37 HOH HOH . F 6 HOH A 14 314 70 HOH HOH . F 6 HOH A 15 315 47 HOH HOH . F 6 HOH A 16 316 29 HOH HOH . F 6 HOH A 17 317 77 HOH HOH . F 6 HOH A 18 318 1 HOH HOH . F 6 HOH A 19 319 42 HOH HOH . F 6 HOH A 20 320 86 HOH HOH . F 6 HOH A 21 321 8 HOH HOH . F 6 HOH A 22 322 27 HOH HOH . F 6 HOH A 23 323 52 HOH HOH . F 6 HOH A 24 324 68 HOH HOH . F 6 HOH A 25 325 50 HOH HOH . F 6 HOH A 26 326 60 HOH HOH . F 6 HOH A 27 327 21 HOH HOH . F 6 HOH A 28 328 44 HOH HOH . F 6 HOH A 29 329 16 HOH HOH . F 6 HOH A 30 330 14 HOH HOH . F 6 HOH A 31 331 31 HOH HOH . F 6 HOH A 32 332 35 HOH HOH . F 6 HOH A 33 333 19 HOH HOH . F 6 HOH A 34 334 22 HOH HOH . F 6 HOH A 35 335 9 HOH HOH . F 6 HOH A 36 336 58 HOH HOH . F 6 HOH A 37 337 6 HOH HOH . F 6 HOH A 38 338 46 HOH HOH . F 6 HOH A 39 339 57 HOH HOH . F 6 HOH A 40 340 5 HOH HOH . F 6 HOH A 41 341 32 HOH HOH . F 6 HOH A 42 342 34 HOH HOH . F 6 HOH A 43 343 7 HOH HOH . F 6 HOH A 44 344 39 HOH HOH . F 6 HOH A 45 345 87 HOH HOH . F 6 HOH A 46 346 79 HOH HOH . F 6 HOH A 47 347 11 HOH HOH . F 6 HOH A 48 348 4 HOH HOH . F 6 HOH A 49 349 85 HOH HOH . F 6 HOH A 50 350 36 HOH HOH . F 6 HOH A 51 351 2 HOH HOH . F 6 HOH A 52 352 81 HOH HOH . F 6 HOH A 53 353 54 HOH HOH . F 6 HOH A 54 354 67 HOH HOH . F 6 HOH A 55 355 45 HOH HOH . F 6 HOH A 56 356 91 HOH HOH . F 6 HOH A 57 357 17 HOH HOH . F 6 HOH A 58 358 59 HOH HOH . F 6 HOH A 59 359 76 HOH HOH . F 6 HOH A 60 360 83 HOH HOH . F 6 HOH A 61 361 71 HOH HOH . F 6 HOH A 62 362 15 HOH HOH . F 6 HOH A 63 363 24 HOH HOH . F 6 HOH A 64 364 12 HOH HOH . F 6 HOH A 65 365 20 HOH HOH . F 6 HOH A 66 366 92 HOH HOH . F 6 HOH A 67 367 56 HOH HOH . F 6 HOH A 68 368 38 HOH HOH . F 6 HOH A 69 369 41 HOH HOH . F 6 HOH A 70 370 90 HOH HOH . F 6 HOH A 71 371 80 HOH HOH . F 6 HOH A 72 372 18 HOH HOH . F 6 HOH A 73 373 69 HOH HOH . F 6 HOH A 74 374 84 HOH HOH . F 6 HOH A 75 375 62 HOH HOH . F 6 HOH A 76 376 88 HOH HOH . F 6 HOH A 77 377 48 HOH HOH . F 6 HOH A 78 378 65 HOH HOH . F 6 HOH A 79 379 75 HOH HOH . F 6 HOH A 80 380 51 HOH HOH . F 6 HOH A 81 381 74 HOH HOH . F 6 HOH A 82 382 43 HOH HOH . F 6 HOH A 83 383 63 HOH HOH . F 6 HOH A 84 384 93 HOH HOH . F 6 HOH A 85 385 26 HOH HOH . F 6 HOH A 86 386 73 HOH HOH . F 6 HOH A 87 387 33 HOH HOH . F 6 HOH A 88 388 30 HOH HOH . F 6 HOH A 89 389 64 HOH HOH . F 6 HOH A 90 390 78 HOH HOH . F 6 HOH A 91 391 82 HOH HOH . F 6 HOH A 92 392 61 HOH HOH . G 6 HOH B 1 101 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 2PE . . . C 3 1.294 -17.146 3.795 1 51.02 ? O1 2PE 201 A 1 HETATM 2 C C2 2PE . . . C 3 1.15 -16.269 4.879 1 49.26 ? C2 2PE 201 A 1 HETATM 3 C C3 2PE . . . C 3 -0.325 -15.914 5.056 1 47.62 ? C3 2PE 201 A 1 HETATM 4 O O4 2PE . . . C 3 -0.465 -14.948 6.061 1 46.29 ? O4 2PE 201 A 1 HETATM 5 C C5 2PE . . . C 3 0.017 -13.685 5.703 1 44.38 ? C5 2PE 201 A 1 HETATM 6 C C6 2PE . . . C 3 -0.731 -12.597 6.474 1 41.58 ? C6 2PE 201 A 1 HETATM 7 O O7 2PE . . . C 3 -0.39 -11.353 5.928 1 44.85 ? O7 2PE 201 A 1 HETATM 8 C C8 2PE . . . C 3 -1.458 -10.536 5.526 1 44.14 ? C8 2PE 201 A 1 HETATM 9 C C9 2PE . . . C 3 -2.621 -11.35 4.962 1 44.99 ? C9 2PE 201 A 1 HETATM 10 O O10 2PE . . . C 3 -3.428 -10.537 4.158 1 43.98 ? O10 2PE 201 A 1 HETATM 11 C C11 2PE . . . C 3 -3.521 -11 2.843 1 44.78 ? C11 2PE 201 A 1 HETATM 12 C C12 2PE . . . C 3 -4.972 -11.339 2.506 1 43.55 ? C12 2PE 201 A 1 HETATM 13 O O13 2PE . . . C 3 -5.217 -12.696 2.748 1 46.85 ? O13 2PE 201 A 1 HETATM 14 C C14 2PE . . . C 3 -4.351 -13.592 2.105 1 46.99 ? C14 2PE 201 A 1 HETATM 15 C C15 2PE . . . C 3 -3.623 -14.453 3.14 1 48.52 ? C15 2PE 201 A 1 HETATM 16 O O16 2PE . . . C 3 -4.434 -15.524 3.53 1 49.06 ? O16 2PE 201 A 1 HETATM 17 C C17 2PE . . . C 3 -5.049 -15.318 4.768 1 48.49 ? C17 2PE 201 A 1 HETATM 18 C C18 2PE . . . C 3 -5.527 -16.637 5.368 1 44.8 ? C18 2PE 201 A 1 HETATM 19 O O19 2PE . . . C 3 -6.872 -16.518 5.74 1 40.72 ? O19 2PE 201 A 1 HETATM 20 C C20 2PE . . . C 3 -7.552 -17.737 5.728 1 40.61 ? C20 2PE 201 A 1 HETATM 21 C C21 2PE . . . C 3 -8.96 -17.573 5.166 1 40.16 ? C21 2PE 201 A 1 HETATM 22 O O22 2PE . . . C 3 -9.645 -16.581 5.87 1 43.88 ? O22 2PE 201 A 1 HETATM 23 C C23 2PE . . . C 3 -10.628 -15.937 5.114 1 44.27 ? C23 2PE 201 A 1 HETATM 24 C C24 2PE . . . C 3 -11.069 -14.675 5.851 1 46.28 ? C24 2PE 201 A 1 HETATM 25 O O25 2PE . . . C 3 -9.973 -13.827 6.026 1 45.73 ? O25 2PE 201 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #